Myroides odoratimimus CCUG 12700 is a bacterium that was isolated from Human urine.
genome sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacteroidota |
| Class Flavobacteriia |
| Order Flavobacteriales |
| Family Flavobacteriaceae |
| Genus Myroides |
| Species Myroides odoratimimus |
| Full scientific name Myroides odoratimimus Vancanneyt et al. 1996 |
| @ref | Sample type | Host species | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|---|
| 45797 | Human urine | Homo sapiens | 1982 | Göteborg | Sweden | SWE | Europe |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Myro_odor_CCUG_12700_V1 assembly for Myroides odoratimimus CCUG 12700 | scaffold | 883151 | 71.02 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 90.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 90.72 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.75 | no |
| 125439 | motility | BacteriaNetⓘ | no | 74.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.39 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.11 | no |
| 125438 | aerobic | aerobicⓘ | yes | 84.28 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 91.29 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.91 | no |
| 125438 | flagellated | motile2+ⓘ | no | 88.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Comparative genomic analysis of Myroides odoratimimus isolates. | Hu S, Cao L, Wu Y, Zhou Y, Jiang T, Wang L, Wang Q, Ming D, Chen S, Wang M. | Microbiologyopen | 10.1002/mbo3.634 | 2019 | |
| Enzymology | Myroilysin Is a New Bacterial Member of the M12A Family of Metzincin Metallopeptidases and Is Activated by a Cysteine Switch Mechanism. | Xu D, Zhou J, Lou X, He J, Ran T, Wang W. | J Biol Chem | 10.1074/jbc.m116.758110 | 2017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #45797 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12700 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
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https://doi.org/10.13145/bacdive142500.20260601.11
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