Erwinia endophytica (LMG 28457, CECT 8692, BSTT30)

Name: Erwinia endophytica (LMG 28457, CECT 8692, BSTT30)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140918

Type strain

Strain Designation BSTT30

Culture col. no. LMG 28457 CECT 8692 BSTT30

NCBI tax ID(s) 1563158

Special Collections Literature strains

Links

Erwinia endophytica BSTT30 is a facultative anaerobe, Gram-negative, motile prokaryote that forms circular colonies and was isolated from The stems of potato plants cropped from soil.

Gram-negative motile rod-shaped colony-forming facultative anaerobe 16S sequence

Name and taxonomic classification

SI-ID 396506

LMG 28457,CECT 8692,CFBP 8470

@ref 20215

Last LPSN update 2025-12-16 10:03:43

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Erwiniaceae

Genus Erwinia

Species Erwinia endophytica

Full scientific name Erwinia endophytica Ramírez-Bahena et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
43787	negative	1.5-1.7 µm	0.8-0.9 µm	rod-shaped

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
43787	2-2.5 mm	Beige, translucent	circular	2 days	Nutrient agar

Culture and growth conditions

Culture medium

@ref	Name	Growth
43787	Nutrient agar (NA)

Culture temp

@ref	Growth	Type	Temperature (°C)
43787	positive	growth	5-35

Culture pH

@ref	Ability	Type	PH	PH range
43787	positive	growth	4.5-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

43787

Oxygen tolerancefacultative anaerobe

Spore formation

43787

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43787	NaCl	positive	growth	0-6 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43787	62064 ChEBI	2,3-butanediol	-	respiration
43787	16808 ChEBI	2-dehydro-D-gluconate	-	assimilation
43787	64552 ChEBI	2-hydroxybutyrate	-	respiration
43787	16763 ChEBI	2-oxobutanoate	-	respiration
43787	30916 ChEBI	2-oxoglutarate	-	respiration
43787	28644 ChEBI	2-oxopentanoate	-	respiration
43787	16724 ChEBI	4-hydroxybutyrate	-	respiration
43787	18101 ChEBI	4-hydroxyphenylacetic acid	-	respiration
43787	58143 ChEBI	5-dehydro-D-gluconate	-	assimilation
43787	30089 ChEBI	acetate	+/-	assimilation
43787	17128 ChEBI	adipate	-	assimilation
43787	40585 ChEBI	alpha-cyclodextrin	-	respiration
43787	17925 ChEBI	alpha-D-glucose	+	respiration
43787	36219 ChEBI	alpha-lactose	+	respiration
43787	27613 ChEBI	amygdalin	+	builds acid from
43787	18305 ChEBI	arbutin	+	builds acid from
43787	8295 ChEBI	beta-hydroxybutyrate	-	respiration
43787	73706 ChEBI	bromosuccinate	+/-	assimilation
43787	17057 ChEBI	cellobiose	+	builds acid from
43787	17057 ChEBI	cellobiose	+	respiration
43787	16383 ChEBI	cis-aconitate	-	respiration
43787	16947 ChEBI	citrate	+	assimilation
43787	16947 ChEBI	citrate	+	respiration
43787	15570 ChEBI	D-alanine	-	respiration
43787	17108 ChEBI	D-arabinose	+	builds acid from
43787	18333 ChEBI	D-arabitol	-	builds acid from
43787	18333 ChEBI	D-arabitol	-	respiration
43787	15824 ChEBI	D-fructose	+	respiration
43787	28847 ChEBI	D-fucose	+	builds acid from
43787	15895 ChEBI	D-galactonic acid lactone	+	respiration
43787	12936 ChEBI	D-galactose	+	respiration
43787	18024 ChEBI	D-galacturonic acid	-	respiration
43787	18391 ChEBI	D-gluconate	+	respiration
43787	17784 ChEBI	D-glucosaminic acid	-	respiration
43787	14314 ChEBI	D-glucose 6-phosphate	+	respiration
43787	15748 ChEBI	D-glucuronate	-	respiration
43787	16899 ChEBI	D-mannitol	+	respiration
43787	16024 ChEBI	D-mannose	+	respiration
43787	27605 ChEBI	D-psicose	+	respiration
43787	16988 ChEBI	D-ribose	+	builds acid from
43787	33801 ChEBI	D-saccharate	-	respiration
43787	16523 ChEBI	D-serine	-	respiration
43787	17924 ChEBI	D-sorbitol	-	respiration
43787	65327 ChEBI	D-xylose	+	builds acid from
43787	27689 ChEBI	decanoate	-	assimilation
43787	23652 ChEBI	dextrin	+	respiration
43787	17126 ChEBI	DL-carnitine	-	respiration
43787	17113 ChEBI	erythritol	-	builds acid from
43787	17113 ChEBI	erythritol	-	respiration
43787	4853 ChEBI	esculin	-	hydrolysis
43787	4853 ChEBI	esculin	+	builds acid from
43787	16000 ChEBI	ethanolamine	-	respiration
43787	15740 ChEBI	formate	+/-	assimilation
43787	28757 ChEBI	fructose	+	builds acid from
43787	16813 ChEBI	galactitol	-	builds acid from
43787	28260 ChEBI	galactose	+	builds acid from
43787	16865 ChEBI	gamma-aminobutyric acid	-	respiration
43787	5291 ChEBI	gelatin	-	hydrolysis
43787	28066 ChEBI	gentiobiose	+	builds acid from
43787	28066 ChEBI	gentiobiose	+	respiration
43787	24265 ChEBI	gluconate	-	builds acid from
43787	24265 ChEBI	gluconate	+	assimilation
43787	17234 ChEBI	glucose	+	assimilation
43787	17234 ChEBI	glucose	+	builds acid from
43787	17234 ChEBI	glucose	+	fermentation
43787	29042 ChEBI	glucose 1-phosphate	+	respiration
43787	32323 ChEBI	glucuronamide	-	respiration
43787	17754 ChEBI	glycerol	+	builds acid from
43787	17754 ChEBI	glycerol	+	respiration
43787	14336 ChEBI	glycerol 1-phosphate	+/-	assimilation
43787	28087 ChEBI	glycogen	-	builds acid from
43787	28087 ChEBI	glycogen	-	respiration
43787	73804 ChEBI	glycyl L-aspartic acid	+	respiration
43787	73784 ChEBI	glycyl-l-glutamate	+	respiration
43787	24741 ChEBI	hydroxyproline	-	respiration
43787	17596 ChEBI	inosine	+	respiration
43787	15443 ChEBI	inulin	-	builds acid from
43787	17240 ChEBI	itaconate	-	respiration
43787	21217 ChEBI	L-alaninamide	-	respiration
43787	16977 ChEBI	L-alanine	+	respiration
43787	73786 ChEBI	L-alanylglycine	+	respiration
43787	30849 ChEBI	L-arabinose	+	assimilation
43787	30849 ChEBI	L-arabinose	+	builds acid from
43787	30849 ChEBI	L-arabinose	+	respiration
43787	18403 ChEBI	L-arabitol	-	builds acid from
43787	17196 ChEBI	L-asparagine	+	respiration
43787	29991 ChEBI	L-aspartate	+	respiration
43787	18287 ChEBI	L-fucose	+	builds acid from
43787	18287 ChEBI	L-fucose	+	respiration
43787	29985 ChEBI	L-glutamate	+	respiration
43787	15971 ChEBI	L-histidine	+	respiration
43787	15603 ChEBI	L-leucine	-	respiration
43787	15729 ChEBI	L-ornithine	-	respiration
43787	17295 ChEBI	L-phenylalanine	-	respiration
43787	17203 ChEBI	L-proline	+	respiration
43787	18183 ChEBI	L-pyroglutamic acid	-	respiration
43787	62345 ChEBI	L-rhamnose	+	builds acid from
43787	62345 ChEBI	L-rhamnose	+	respiration
43787	17115 ChEBI	L-serine	+	respiration
43787	16857 ChEBI	L-threonine	-	respiration
43787	65328 ChEBI	L-xylose	-	builds acid from
43787	24996 ChEBI	lactate	+	respiration
43787	17716 ChEBI	lactose	+	builds acid from
43787	6359 ChEBI	lactulose	-	respiration
43787	25097 ChEBI	lyxose	+	builds acid from
43787	25115 ChEBI	malate	+	assimilation
43787	15792 ChEBI	malonate	-	respiration
43787	17306 ChEBI	maltose	+	assimilation
43787	17306 ChEBI	maltose	+	respiration
43787	29864 ChEBI	mannitol	+	assimilation
43787	29864 ChEBI	mannitol	+	builds acid from
43787	37684 ChEBI	mannose	+	assimilation
43787	37684 ChEBI	mannose	+	builds acid from
43787	6731 ChEBI	melezitose	+	builds acid from
43787	28053 ChEBI	melibiose	+	builds acid from
43787	28053 ChEBI	melibiose	+	respiration
43787	320061 ChEBI	methyl alpha-D-glucopyranoside	+/-	assimilation
43787	43943 ChEBI	methyl alpha-D-mannoside	+	builds acid from
43787	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from
43787	37657 ChEBI	methyl D-glucoside	+	respiration
43787	51850 ChEBI	methyl pyruvate	+	respiration
43787	75146 ChEBI	monomethyl succinate	+/-	assimilation
43787	17268 ChEBI	myo-inositol	+	builds acid from
43787	17268 ChEBI	myo-inositol	+	respiration
43787	28037 ChEBI	N-acetylgalactosamine	-	respiration
43787	506227 ChEBI	N-acetylglucosamine	+	assimilation
43787	506227 ChEBI	N-acetylglucosamine	+	builds acid from
43787	506227 ChEBI	N-acetylglucosamine	+	respiration
43787	17632 ChEBI	nitrate	-	reduction
43787	18401 ChEBI	phenylacetate	-	assimilation
43787	50048 ChEBI	phenylethylamine	-	respiration
43787	17272 ChEBI	propionate	-	respiration
43787	17148 ChEBI	putrescine	-	respiration
43787	26490 ChEBI	quinate	+/-	assimilation
43787	16634 ChEBI	raffinose	+	builds acid from
43787	16634 ChEBI	raffinose	+	respiration
43787	15963 ChEBI	ribitol	-	builds acid from
43787	15963 ChEBI	ribitol	-	respiration
43787	17814 ChEBI	salicin	+	builds acid from
43787	41865 ChEBI	sebacic acid	-	respiration
43787	30911 ChEBI	sorbitol	-	builds acid from
43787	27922 ChEBI	sorbose	-	builds acid from
43787	28017 ChEBI	starch	-	builds acid from
43787	143136 ChEBI	succinamate	-	respiration
43787	30031 ChEBI	succinate	+	respiration
43787	17992 ChEBI	sucrose	+	builds acid from
43787	17992 ChEBI	sucrose	+	respiration
43787	33954 ChEBI	tagatose	-	builds acid from
43787	17748 ChEBI	thymidine	+	respiration
43787	27082 ChEBI	trehalose	+	builds acid from
43787	27082 ChEBI	trehalose	+	respiration
43787	32528 ChEBI	turanose	+	builds acid from
43787	32528 ChEBI	turanose	+	respiration
43787	53423 ChEBI	tween 40	+/-	assimilation
43787	53426 ChEBI	tween 80	+	respiration
43787	16704 ChEBI	uridine	+	respiration
43787	27248 ChEBI	urocanic acid	+	respiration
43787	17151 ChEBI	xylitol	+	builds acid from
43787	17151 ChEBI	xylitol	+	respiration

Metabolite production

@ref	Chebi-ID	Metabolite
43787	15688 ChEBI	acetoin
43787	16136 ChEBI	hydrogen sulfide
43787	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
43787	arginine dihydrolase	-	3.5.3.6
43787	beta-galactosidase	+	3.2.1.23
43787	catalase	+	1.11.1.6
43787	cytochrome oxidase	-	1.9.3.1
43787	lysine decarboxylase	-	4.1.1.18
43787	ornithine decarboxylase	-	4.1.1.17
43787	urease	-	3.5.1.5

Fatty acid profile

Metadata FA analysis

@ref

43787

Fatty acid	Percentage
C16:0	35.2
C16:1ω7c / C16:1ω6c	27.4
C18:1ω7c / C18:2ω6,9c	14.7
C12:0-aldehyde / unknown	6.6
C14:0	5.4
C17:0cyclo	4.9
C12:0	4
C18:0	0.6
C17:0	0.3

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Stem (Branch)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
43787	The stems of potato plants (Solanum tuberosum L.) cropped from soil	Salamanca Province	Spain	ESP	Europe

Taxonmaps

69479

Global distribution of 16S sequence LN624761 (>99% sequence identity) for Erwinia from Microbeatlas

Aquatic Samples	1307
Soil Samples	1215
Animal Samples	5686
Plant Samples	2038
Total Samples	10246

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Database
43787	Erwinia sp. BSTT30 partial 16S rRNA gene, strain BSTT30	LN624761

GC content

@ref	GC-content (mol%)	Method
43787	50.1	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Erwinia endophytica sp. nov., isolated from potato (Solanum tuberosum L.) stems.	Ramirez-Bahena MH, Salazar S, Cuesta MJ, Tejedor C, Igual JM, Fernandez-Pascual M, Peix A	Int J Syst Evol Microbiol	10.1099/ijsem.0.000820	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43787	Martha-Helena Ramírez-Bahena, Sergio Salazar, Maria José Cuesta, Carmen Tejedor, José-Mariano Igual, Mercedes Fernández-Pascual, Álvaro Peix: Erwinia endophytica sp. nov., isolated from potato (Solanum tuberosum L.) stems. IJSEM 66: 975 - 981 2016 ( DOI 10.1099/ijsem.0.000820 , PubMed 26637820 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Erwinia endophytica (LMG 28457, CECT 8692, BSTT30)

Name and taxonomic classification