Shewanella algae (DSM 9167, ATCC 51192, IAM 14159)

Name: Shewanella algae (DSM 9167, ATCC 51192, IAM 14159)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14062

Type strain

Strain Designation OK-1

Culture col. no. DSM 9167 ATCC 51192 IAM 14159 NCIMB 13178 CCUG 39064 5 more

NCBI tax ID(s) 1236544 38313

Special Collections DSMZ CCUG JCM CIP

History <- NCIMB <- IAM <- U. Simidu <- Y. Kotaki IAM 14159 <-- U. Simidu OK-1. CIP <- 2000, IAM <- U. Simidu <- Y. Kotaki, strain OK-1

Links

Shewanella algae OK-1 is an obligate aerobe, Gram-negative, motile bacterium that produces toxins and was isolated from surface of a red alga Jania sp..

toxin production Gram-negative motile rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 11992

LMG 18393,ATCC 51192,IAM 14159,CCUG 39064,CIP 106454,NCIMB 13178,CECT 5071,JCM 21037,NBRC 103173,DSM 9167

@ref 20215

Last LPSN update 2026-02-09 11:21:18

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Shewanellaceae

Genus Shewanella

Species Shewanella algae

Full scientific name Shewanella algae corrig. Simidu et al. 1990

Synonyms (3)

Shewanella alga
Shewanella upenei
Shewanella haliotis

BacDive ID	Other strains from **Shewanella algae** (22)	Type strain
134829	S. algae CIP 72.3
136012	S. algae CIP 101181
137124	S. algae X 127, 567, CIP 67.65
137515	S. algae CIP 68.20
138042	S. algae Monchausse, CIP 102575
138792	S. algae CIP 103562, ATCC 49138
141271	S. algae CCUG 526
141303	S. algae CCUG 789
142550	S. algae CCUG 12945
142836	S. algae CCUG 15259
143597	S. algae CCUG 20533
144446	S. algae CCUG 24987
149900	S. algae CCUG 38646
150237	S. algae CCUG 39355, NCTC 10738, LMG 2265, JCM 20959, ...
150853	S. algae CCUG 42567
152459	S. algae CCUG 46849
152943	S. algae CCUG 48086
153654	S. algae CCUG 50501
155108	S. algae CCUG 56496
161437	S. algae JCM 13988
161438	S. algae JCM 13989
171020	S. algae CIMB 04-7478, CRBIP17.140

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
116221	negative	rod-shaped
125438	negative		98
125439	negative		99.9

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3500	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
3500	SEA WATER YEAST PEPTONE MEDIUM (DSMZ Medium 949)	Medium recipe at MediaDive	Name: SEA WATER YEAST PEPTONE MEDIUM (DSMZ Medium 949) Composition: Peptone 5.0 g/l Yeast extract 3.0 g/l Sea water Distilled water
39531	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
116221	CIP Medium 13	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
3500	positive	growth	20
39531	positive	growth	30
67770	positive	growth	25
116221	positive	growth	5-41

Physiology and metabolism

Oxygen tolerance

116221

Oxygen toleranceobligate aerobe

Spore formation

@ref	Spore formation	Confidence
125438		90.198
125439		99.9

Compound production

3500

Compoundtetrodotoxin

Halophily

@ref	Salt	Growth	Tested relation	Concentration
116221	NaCl	positive	growth	0-10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
116221	16947 ChEBI	citrate	-	carbon source
116221	4853 ChEBI	esculin	-	hydrolysis
116221	17632 ChEBI	nitrate	+	reduction
116221	17632 ChEBI	nitrate	-	respiration
116221	16301 ChEBI	nitrite	+	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
116221	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
116221	35581 ChEBI	indole
67770	9506 ChEBI	tetrodotoxin

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116221	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116221	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
116221	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116221	caseinase	+	3.4.21.50
116221	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
116221	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116221	gelatinase	+
116221	lecithinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
116221	lipase	+
68382	lipase (C 14)	-		from API zym
116221	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116221	ornithine decarboxylase	+	4.1.1.17
116221	oxidase	+
116221	protease	+
68382	trypsin	+	3.4.21.4	from API zym
116221	tryptophan deaminase	-
116221	tween esterase	-
116221	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	formaldehyde oxidation	100	3 of 3
66794	enterobactin biosynthesis	100	3 of 3
66794	suberin monomers biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	adipate degradation	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	vitamin K metabolism	100	5 of 5
66794	biotin biosynthesis	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	gluconeogenesis	100	8 of 8
66794	aerobactin biosynthesis	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	threonine metabolism	100	10 of 10
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	ubiquinone biosynthesis	100	7 of 7
66794	palmitate biosynthesis	100	22 of 22
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	photosynthesis	92.86	13 of 14
66794	Entner Doudoroff pathway	90	9 of 10
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	glutamate and glutamine metabolism	85.71	24 of 28
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	heme metabolism	85.71	12 of 14
66794	NAD metabolism	83.33	15 of 18
66794	pyrimidine metabolism	82.22	37 of 45
66794	pentose phosphate pathway	81.82	9 of 11
66794	purine metabolism	80.85	76 of 94
66794	peptidoglycan biosynthesis	80	12 of 15
66794	hydrogen production	80	4 of 5
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	leucine metabolism	76.92	10 of 13
66794	phenylalanine metabolism	76.92	10 of 13
66794	alanine metabolism	75.86	22 of 29
66794	butanoate fermentation	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	lipid metabolism	74.19	23 of 31
66794	flavin biosynthesis	73.33	11 of 15
66794	proline metabolism	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	citric acid cycle	71.43	10 of 14
66794	propanol degradation	71.43	5 of 7
66794	propionate fermentation	70	7 of 10
66794	cysteine metabolism	66.67	12 of 18
66794	octane oxidation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	acetoin degradation	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	d-mannose degradation	66.67	6 of 9
66794	tryptophan metabolism	65.79	25 of 38
66794	methionine metabolism	65.38	17 of 26
66794	glycolysis	64.71	11 of 17
66794	glutathione metabolism	64.29	9 of 14
66794	vitamin B6 metabolism	63.64	7 of 11
66794	oxidative phosphorylation	62.64	57 of 91
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	vitamin B1 metabolism	61.54	8 of 13
66794	lipoate biosynthesis	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	starch degradation	60	6 of 10
66794	histidine metabolism	58.62	17 of 29
66794	arginine metabolism	58.33	14 of 24
66794	non-pathway related	57.89	22 of 38
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	tyrosine metabolism	57.14	8 of 14
66794	lysine metabolism	57.14	24 of 42
66794	degradation of sugar alcohols	56.25	9 of 16
66794	urea cycle	53.85	7 of 13
66794	sulfate reduction	53.85	7 of 13
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	glycine metabolism	50	5 of 10
66794	carnitine metabolism	50	4 of 8
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	ketogluconate metabolism	50	4 of 8
66794	cyclohexanol degradation	50	2 of 4
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	ethanol fermentation	50	1 of 2
66794	nitrate assimilation	44.44	4 of 9
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	glycine betaine biosynthesis	40	2 of 5
66794	factor 420 biosynthesis	40	2 of 5
66794	gallate degradation	40	2 of 5
66794	polyamine pathway	39.13	9 of 23
66794	3-phenylpropionate degradation	33.33	5 of 15
66794	sphingosine metabolism	33.33	2 of 6
66794	cyanate degradation	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	arachidonic acid metabolism	33.33	6 of 18
66794	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
66794	IAA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	coenzyme M biosynthesis	30	3 of 10
66794	vitamin B12 metabolism	29.41	10 of 34
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	degradation of hexoses	27.78	5 of 18
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	ascorbate metabolism	27.27	6 of 22
66794	degradation of pentoses	25	7 of 28
66794	lactate fermentation	25	1 of 4
66794	phenol degradation	25	5 of 20
66794	toluene degradation	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4
66794	degradation of sugar acids	24	6 of 25
66794	phosphatidylethanolamine bioynthesis	23.08	3 of 13
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	4-hydroxymandelate degradation	22.22	2 of 9

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116221	-	+	+	+	-	+	-	-	+	+	+	+	-	-	-	-	-	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116221	not determinedn.d.	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	+	-	+	+	-	-	-	-	-	+	-	+	-	-	-	-	+	+	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Algae	#Red algae

Isolation

@ref	Sample type	Host species
3500	surface of a red alga Jania sp.	Jania
54638	Red alga,Jania sp.
67770	Surface of a red alga Jania sp.	Jania sp.
116221	Red algae

Taxonmaps

69479

Global distribution of 16S sequence U91546 (>99% sequence identity) for Shewanella algae from Microbeatlas

Aquatic Samples	730
Soil Samples	118
Animal Samples	3902
Plant Samples	90
Total Samples	4840

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3500	2	Risk group (German classification) According to TRBA 466
116221	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1239667v1 assembly for Shewanella algae ATCC 51192	contig	GCA_012396675	38313.84		38313	68.32
66792	ASM159887v1 assembly for Shewanella algae JCM 21037 = NBRC 103173	contig	GCA_001598875	1236544.7	2731957717	1236544	51.03
66792	ASM61504v1 assembly for Shewanella algae JCM 21037 = NBRC 103173	contig	GCA_000615045	1236544.3	2585427912	1236544	16.04

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Shewanella algae strain ATCC 51192 16S ribosomal RNA gene, partial sequence	FJ971879	799	38313
20218	Shewanella algae strain ATCC 51192 16S ribosomal RNA gene, partial sequence	HM016087	1482	38313
20218	Shewanella alga 16S ribosomal RNA (rrs) gene, partial sequence	U91546	1354	38313
20218	Shewanella algae gene for 16S rRNA, partial sequence, strain: NBRC 103173	AB681980	1470	38313
3500	Shewanella algae strain ATCC 51192 16S ribosomal RNA gene, partial sequence	AF005249	1538	38313
124043	Shewanella algae strain JCM 21037 16S ribosomal RNA gene, partial sequence.	ON872253	743	38313
124043	Shewanella algae strain CECT 5071 16S ribosomal RNA gene, partial sequence.	MH361583	1414	38313
124043	Shewanella algae strain ATCC 51192 16S ribosomal RNA gene, partial sequence.	MK185060	618	38313
124043	Shewanella algae strain ATCC 51192 16S ribosomal RNA gene, partial sequence.	MK185036	800	38313
124043	Shewanella algae strain JCM 21037 16S ribosomal RNA gene, partial sequence.	MW111169	592	38313
124043	Shewanella algae strain JCM 21037(T) 16S ribosomal RNA gene, partial sequence.	MZ484075	1485	38313

GC content

@ref	GC-content (mol%)	Method
67770	54	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Shewanella algae JCM 21037 = NBRC 103173
NCBI: GCA_000615045

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	71.70	no
125439	gram_stain	BacteriaNetⓘ	negative	99.90	no
125439	motility	BacteriaNetⓘ	yes	87.60	no
125439	spore_formation	BacteriaNetⓘ	no	99.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Shewanella algae JCM 21037
PATRIC: 1236544.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.00	no
125438	anaerobic	anaerobicⓘ	no	93.18	no
125438	spore-forming	spore-formingⓘ	no	90.20	no
125438	aerobic	aerobicⓘ	yes	57.78	yes
125438	thermophilic	thermophileⓘ	no	99.00	yes
125438	flagellated	motile2+ⓘ	yes	87.73	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete genome sequence of Shewanella algae strain 2NE11, a decolorizing bacterium isolated from industrial effluent in Peru.	Lizarraga WC, Mormontoy CG, Calla H, Castaneda M, Taira M, Garcia R, Marin C, Abanto M, Ramirez P.	Biotechnol Rep (Amst)	10.1016/j.btre.2022.e00704	2022
Pathogenicity	Genetic Environment Surrounding bla_OXA-55-like in Clinical Isolates of Shewanella algae Clade and Enhanced Expression of bla_OXA-55-like in a Carbapenem-Resistant Isolate.	Ohama Y, Aoki K, Harada S, Nagasawa T, Sawabe T, Nonaka L, Moriya K, Ishii Y, Tateda K.	mSphere	10.1128/msphere.00593-21	2021
	Identification of changes in the microflora composition of Japanese horse mackerel (Trachurus japonicus) during storage to identify specific spoilageorganisms.	Kyoui D, Fukasawa Y, Miyanaga W, Nakamura Y, Yamane T, Sugita K, Yamadera S, Kai M, Shinoda K, Kawarai T, Ogihara H.	Curr Res Food Sci	10.1016/j.crfs.2022.07.015	2022
Enzymology	Characterization of putative pathogenic Shewanella algae isolated from ballast water.	Ibrahim NNN, Nasir NM, Sahrani FK, Ahmad A, Sairi F.	Vet World	10.14202/vetworld.2021.678-688	2021
Genetics	The Microbiome of Catfish (Ictalurus punctatus) Treated with Natural Preservatives During Refrigerated Storage.	Lee JL, Yourek G.	Microorganisms	10.3390/microorganisms13020244	2025
Genetics	Genomic analysis reveals high intra-species diversity of Shewanella algae.	Huang Z, Yu K, Fu S, Xiao Y, Wei Q, Wang D.	Microb Genom	10.1099/mgen.0.000786	2022
Metabolism	Physiological and transcriptional approaches reveal connection between nitrogen and manganese cycles in Shewanella algae C6G3.	Aigle A, Bonin P, Iobbi-Nivol C, Mejean V, Michotey V.	Sci Rep	10.1038/srep44725	2017
	Novel Mobile Integrons and Strain-Specific Integrase Genes within Shewanella spp. Unveil Multiple Lateral Genetic Transfer Events within The Genus.	Ayala Nunez T, Cerbino GN, Rapisardi MF, Quiroga C, Centron D.	Microorganisms	10.3390/microorganisms10061102	2022
	Draft-genome sequence of Shewanella algae strain C6G3.	Aigle A, Michotey V, Bonin P.	Stand Genomic Sci	10.1186/s40793-015-0022-0	2015
	Primary Shewanella algae bacteremia mimicking Vibrio septicemia.	Myung DS, Jung YS, Kang SJ, Song YA, Park KH, Jung SI, Kim SH, Shin JH.	J Korean Med Sci	10.3346/jkms.2009.24.6.1192	2009
Phylogeny	A diverse group of halophilic bacteria exist in Lunsu, a natural salt water body of Himachal Pradesh, India.	Gupta S, Sharma P, Dev K, Srivastava M, Sourirajan A.	Springerplus	10.1186/s40064-015-1028-1	2015
Enzymology	Mechanisms for Pseudoalteromonas piscicida-Induced Killing of Vibrios and Other Bacterial Pathogens.	Richards GP, Watson MA, Needleman DS, Uknalis J, Boyd EF, Fay JP.	Appl Environ Microbiol	10.1128/aem.00175-17	2017
Pathogenicity	Treatment failure due to emergence of resistance to carbapenem during therapy for Shewanella algae bacteremia.	Kim DM, Kang CI, Lee CS, Kim HB, Kim EC, Kim NJ, Oh MD, Choe KW.	J Clin Microbiol	10.1128/jcm.44.3.1172-1174.2006	2006
Phylogeny	Shewanella and Photobacterium spp. in oysters and seawater from the Delaware Bay.	Richards GP, Watson MA, Crane EJ, Burt IG, Bushek D.	Appl Environ Microbiol	10.1128/aem.00060-08	2008
Genetics	Whole-Genome Sequencing Redefines Shewanella Taxonomy.	Thorell K, Meier-Kolthoff JP, Sjoling A, Martin-Rodriguez AJ.	Front Microbiol	10.3389/fmicb.2019.01861	2019
Enzymology	Detection of food spoilage and pathogenic bacteria based on ligation detection reaction coupled to flow-through hybridization on membranes.	Bohme K, Cremonesi P, Severgnini M, Villa TG, Fernandez-No IC, Barros-Velazquez J, Castiglioni B, Calo-Mata P.	Biomed Res Int	10.1155/2014/156323	2014
Enzymology	Multipurpose assessment for the quantification of Vibrio spp. and total bacteria in fish and seawater using multiplex real-time polymerase chain reaction.	Kim JY, Lee JL.	J Sci Food Agric	10.1002/jsfa.6699	2014
	A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations.	Huang YJ, Kim E, Cox MJ, Brodie EL, Brown R, Wiener-Kronish JP, Lynch SV.	OMICS	10.1089/omi.2009.0100	2010
Phylogeny	Homogeneity of Danish environmental and clinical isolates of Shewanella algae.	Vogel BF, Holt HM, Gerner-Smidt P, Bundvad A, Sogaard P, Gram L.	Appl Environ Microbiol	10.1128/aem.66.1.443-448.2000	2000
Genetics	Investigation and pathogenetic testing of Shewanella spp. positive diarrhea cases in Beijing, China.	Li Y, Yu K, Zhou G, Liu Y, Yan A, He M, Peng T, Huang Z.	Sci Rep	10.1038/s41598-025-15865-1	2025
	A case of bacterial keratitis caused by multi-drug-resistant Shewanella algae without marine exposure.	Song JE, Kim S, Kang HK, Chung I, Kwak YG, Um TH, Cho CR, Chang J.	Oxf Med Case Reports	10.1093/omcr/omab131	2021
	Prevalence and molecular characteristics of Shewanella infection in diarrhea patients in Beijing, China 2017-2019.	Kang Y, Yu K, Huang Z, Pang B, Liu S, Peng T, Li Y, Wang D.	Front Microbiol	10.3389/fmicb.2024.1293577	2024
Genetics	Genome Analysis of Multidrug-Resistant Shewanella algae Isolated From Human Soft Tissue Sample.	Huang YT, Tang YY, Cheng JF, Wu ZY, Mao YC, Liu PY.	Front Pharmacol	10.3389/fphar.2018.00419	2018
Metabolism	Microbial manganese(III) reduction fuelled by anaerobic acetate oxidation.	Szeinbaum N, Lin H, Brandes JA, Taillefert M, Glass JB, DiChristina TJ.	Environ Microbiol	10.1111/1462-2920.13829	2017
Genetics	A Novel Benthic Phage Infecting Shewanella with Strong Replication Ability.	Wang Z, Zhao J, Wang L, Li C, Liu J, Zhang L, Zhang Y.	Viruses	10.3390/v11111081	2019
	Insights into Antagonistic Interactions of Multidrug Resistant Bacteria in Mangrove Sediments from the South Indian State of Kerala.	Imchen M, Vennapu RK, Ghosh P, Kumavath R.	Microorganisms	10.3390/microorganisms7120678	2019
Genetics	Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae.	Tellgren-Roth C, Thorell K, Galperin MY, Krell T, Romling U, Sjoling A, Martin-Rodriguez AJ	Microbiol Resour Announc	10.1128/MRA.00559-21	2021
Phylogeny	Whole-genome sequencing reveals that Shewanella haliotis Kim et al. 2007 can be considered a later heterotypic synonym of Shewanella algae Simidu et al. 1990.	Szeinbaum N, Kellum CE, Glass JB, Janda JM, DiChristina TJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002678	2018
Phylogeny	Differentiation of Shewanella putrefaciens and Shewanella alga on the basis of whole-cell protein profiles, ribotyping, phenotypic characterization, and 16S rRNA gene sequence analysis.	Vogel BF, Jorgensen K, Christensen H, Olsen JE, Gram L	Appl Environ Microbiol	10.1128/aem.63.6.2189-2199.1997	1997
Phylogeny	Taxonomy of four marine bacterial strains that produce tetrodotoxin.	Simidu U, Kita-Tsukamoto K, Yasumoto T, Yotsu M	Int J Syst Bacteriol	10.1099/00207713-40-4-331	1990
Phylogeny	Shewanella dokdonensis sp. nov., isolated from seawater.	Sung HR, Yoon JH, Ghim SY	Int J Syst Evol Microbiol	10.1099/ijs.0.032995-0	2011
Phylogeny	Shewanella upenei sp. nov., a lipolytic bacterium isolated from bensasi goatfish Upeneus bensasi.	Kim KK, Kim YO, Park S, Kang SJ, Nam BH, Kim DN, Oh TK, Yoon JH	J Microbiol	10.1007/s12275-011-0175-5	2011
Phylogeny	Shewanella indica sp. nov., isolated from sediment of the Arabian Sea.	Verma P, Pandey PK, Gupta AK, Kim HJ, Baik KS, Seong CN, Patole MS, Shouche YS	Int J Syst Evol Microbiol	10.1099/ijs.0.026310-0	2010
Phylogeny	Shewanella chilikensis sp. nov., a moderately alkaliphilic gammaproteobacterium isolated from a lagoon.	Sucharita K, Sasikala Ch, Park SC, Baik KS, Seong CN, Ramana ChV	Int J Syst Evol Microbiol	10.1099/ijs.0.010918-0	2009
Phylogeny	Shewanella marina sp. nov., isolated from seawater.	Park SC, Baik KS, Kim MS, Kim D, Seong CN	Int J Syst Evol Microbiol	10.1099/ijs.0.005470-0	2009
Phylogeny	Shewanella haliotis sp. nov., isolated from the gut microflora of abalone, Haliotis discus hannai.	Kim D, Baik KS, Kim MS, Jung BM, Shin TS, Chung GH, Rhee MS, Seong CN	Int J Syst Evol Microbiol	10.1099/ijs.0.65257-0	2007
Phylogeny	Shewanella spongiae sp. nov., isolated from a marine sponge.	Yang SH, Kwon KK, Lee HS, Kim SJ	Int J Syst Evol Microbiol	10.1099/ijs.0.64540-0	2006
Phylogeny	Shewanella irciniae sp. nov., a novel member of the family Shewanellaceae, isolated from the marine sponge Ircinia dendroides in the Bay of Villefranche, Mediterranean Sea.	Lee OO, Lau SCK, Tsoi MMY, Li X, Plakhotnikova I, Dobretsov S, Wu MCS, Wong PK, Weinbauer M, Qian PY	Int J Syst Evol Microbiol	10.1099/ijs.0.64562-0	2006

References

#3500	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9167
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39531	; Curators of the CIP;
#54638	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 39064
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116221	Collection of Institut Pasteur ; Curators of the CIP; CIP 106454
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Shewanella algae (DSM 9167, ATCC 51192, IAM 14159)

Name and taxonomic classification

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