Name: Luteimicrobium xylanilyticum W-15
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 140065

Type strain:

Species: Luteimicrobium xylanilyticum

Strain Designation: W-15

Culture col. no.: DSM 105782, JCM 18090, KCTC 19882

Strain history: <- KS Bae, KRIBB

NCBI tax ID(s): 1133546 (species)

SI-ID 398663

DSM 105782

Special Collections

Section

Luteimicrobium xylanilyticum W-15 is an aerobe, Gram-positive bacterium that was isolated from gut, long-horned beetle Massicus raddei.

Gram-positive
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Promicromonosporaceae*
	Genus	*Luteimicrobium*
	Species	**Luteimicrobium xylanilyticum**
	Full Scientific Name (LPSN)	Luteimicrobium xylanilyticum Kim et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42672]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #42672]

Culture medium growth

[Ref.: #42672]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42672]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #42672]	growth	28 °C
[Ref.: #67770]	growth	25 °C
[Ref.: #67771]	growth	25 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

[Ref.: #67770]	Observation	quinones: MK-8(H₂)
[Ref.: #67771]	Observation	quinones: MK-8(H2)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42672]	Sample type/isolated from	gut, long-horned beetle Massicus raddei
[Ref.: #42672]	Host species	Massicus raddei
[Ref.: #42672]	Geographic location (country and/or sea, region)	near Daejeon district
[Ref.: #42672]	Country	Republic of Korea
[Ref.: #42672]	Country ISO 3 Code	KOR
[Ref.: #42672]	Continent	Asia
[Ref.: #42672]	Geographic location	36.3622°/127.2250°

[Ref.: #67770]	Sample type/isolated from	Gut of a long-horned beetle Massicus raddei collected near the Daejeon district
[Ref.: #67770]	Host species	Massicus raddei
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From insect gut
[Ref.: #67771]	Geographic location (country and/or sea, region)	Daejeon
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Insecta
#Host Body-Site	#Gastrointestinal tract	#Stomach

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ039191 (>99% sequence identity) for Promicromonosporaceae from Microbeatlas

Aquatic Samples	14
Soil Samples	157
Animal Samples	47
Plant Samples	12
Total Samples	230

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42672]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42672]	Luteimicrobium xylanilyticum strain W-15 16S ribosomal RNA gene, partial sequence	JQ039191	1461	GenBank ENA	1133546 tax ID

[Ref.: #67771]	GC-content	73.8 mol%
[Ref.: #67770]	GC-content	73.8 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #42672]

Culture collection no.

DSM 105782, JCM 18090, KCTC 19882

[Ref.: #96479]

SI-ID 398663

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteimicrobium xylanilyticum sp. nov., isolated from the gut of a long-horned beetle, Massicus raddei.	Kim H, Oh HW, Kim JA, Park DS, Park HM, Bae KS	Int J Syst Evol Microbiol	10.1099/ijs.0.048991-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42672

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105782

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96479

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398663.1 )

* These data were automatically processed and therefore are not curated

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