Name: Azospirillum picis DSM 19922
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13999

Type strain:

Species: Azospirillum picis

Culture col. no.: DSM 19922, CCUG 55431, IMMIB TAR-3

Strain history: <- A. F. Yassin, Inst. Med. Mikrobiol., Univ. Bonn, Germany; IMMIB TAR-3 <- B. Arun

NCBI tax ID(s): 488438 (species)

SI-ID 403529

DSM 19922, CCUG 55431

Section

Azospirillum picis DSM 19922 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from discarded road tar.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Azospirillaceae*
	Genus	*Azospirillum*
	Species	**Azospirillum picis**
	Full Scientific Name (LPSN)	Azospirillum picis Lin et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #32645]	Gram stain	negative

[Ref.: #32645]	Cell shape	rod-shaped

[Ref.: #32645]	Motility	yes

[Ref.: #32645]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8391]

Culture medium

TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545)

[Ref.: #8391]

Culture medium growth

[Ref.: #8391]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8391]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #8391]	growth	37 °C
[Ref.: #32645]	growth	22-37 °C
[Ref.: #32645]	optimum	29.5 °C
[Ref.: #60586]	growth	30-37 °C

[Ref.: #8391]	Temperature range	mesophilic
[Ref.: #32645]	Temperature range	mesophilic
[Ref.: #60586]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32645]	Oxygen tolerance	aerobe
[Ref.: #60586]	Oxygen tolerance	aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32645]	arabinose ChEBI	+	carbon source
[Ref.: #32645]	esculin ChEBI	+	hydrolysis
[Ref.: #32645]	fructose ChEBI	+	carbon source
[Ref.: #32645]	galactose ChEBI	+	carbon source
[Ref.: #32645]	glucose ChEBI	+	carbon source
[Ref.: #32645]	glycerol ChEBI	+	carbon source
[Ref.: #32645]	L-arabitol ChEBI	+	carbon source
[Ref.: #32645]	mannitol ChEBI	+	carbon source
[Ref.: #32645]	nitrate ChEBI	+	reduction
[Ref.: #32645]	ribose ChEBI	+	carbon source
[Ref.: #32645]	sorbitol ChEBI	+	carbon source
[Ref.: #32645]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #32645]	catalase	+	1.11.1.6
[Ref.: #32645]	cytochrome oxidase	+	1.9.3.1
[Ref.: #32645]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8391]	Sample type/isolated from	discarded road tar
[Ref.: #8391]	Geographic location (country and/or sea, region)	Taichung City area
[Ref.: #8391]	Country	Taiwan
[Ref.: #8391]	Country ISO 3 Code	TWN
[Ref.: #8391]	Continent	Asia

[Ref.: #60586]	Sample type/isolated from	Tar,discarded road tar
[Ref.: #60586]	Sampling date	2007
[Ref.: #60586]	Geographic location (country and/or sea, region)	Taichung City area
[Ref.: #60586]	Country	Taiwan
[Ref.: #60586]	Country ISO 3 Code	TWN
[Ref.: #60586]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Engineered product
#Engineered	#Waste	#Solid waste

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8391]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8391]	Azospirillum picis partial 16S rRNA gene, type strain IMMIB TAR-3T	AM922283	1445	ENA	488438 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Azospirillum picis DSM 19922	2928263341	draft	JGI IMG/M	488438 tax ID	*

Availability in culture collections External links

[Ref.: #8391]

Culture collection no.

DSM 19922, CCUG 55431, IMMIB TAR-3

[Ref.: #83170]

SI-ID 403529

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Azospirillum thermophilum sp. nov., isolated from a hot spring.	Zhao ZL, Ming H, Ding CL, Ji WL, Cheng LJ, Niu MM, Zhang YM, Zhang LY, Meng XL, Nie GX	Int J Syst Evol Microbiol	10.1099/ijsem.0.003788	2020	*
Phylogeny	Azospirillum soli sp. nov., a nitrogen-fixing species isolated from agricultural soil.	Lin SY, Hameed A, Liu YC, Hsu YH, Lai WA, Shen FT, Young CC	Int J Syst Evol Microbiol	10.1099/ijsem.0.000618	2015	*
Phylogeny	Azospirillum fermentarium sp. nov., a nitrogen-fixing species isolated from a fermenter.	Lin SY, Liu YC, Hameed A, Hsu YH, Lai WA, Shen FT, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.050872-0	2013	*
Phylogeny	Azospirillum picis sp. nov., isolated from discarded tar.	Lin SY, Young CC, Hupfer H, Siering C, Arun AB, Chen WM, Lai WA, Shen FT, Rekha PD, Yassin AF	Int J Syst Evol Microbiol	10.1099/ijs.0.65837-0	2009	*

References

#8391

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19922

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32645

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28856 (see below)

#60586 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55431

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#83170

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403529.1 )

#28856

IJSEM 761 2009 ( DOI 10.1099/ijs.0.65837-0 , PubMed 19329602 )

* These data were automatically processed and therefore are not curated

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