Name: Thalassobacillus pellis 18 OM
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1393

Type strain:

Species: Thalassobacillus pellis

Strain Designation: 18 OM, 18OM

Culture col. no.: DSM 22784, CECT 7566, JCM 16412

Strain history: C. Sánchez-Porro 18OM.

NCBI tax ID(s): 748008 (species)

SI-ID 377312

CECT 7566, DSM 22784, JCM 16412

Special Collections

Section

Thalassobacillus pellis 18 OM is an obligate aerobe, moderately halophilic, spore-forming bacterium that forms circular colonies and was isolated from salted animal hides.

colony-forming
Gram-positive
motile
rod-shaped
spore-forming
moderately halophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Thalassobacillus*
	Species	**Thalassobacillus pellis**
	Full Scientific Name (LPSN)	Thalassobacillus pellis Sánchez-Porro et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #23023]	Gram stain	positive

[Ref.: #23023]	Cell length	1.5-6.0 µm

[Ref.: #23023]	Cell width	1.0 µm

[Ref.: #23023]	Cell shape	rod-shaped

[Ref.: #23023]	Motility	yes

[Ref.: #23023]	Colony size	1.0-2.0 mm
[Ref.: #23023]	Colony color	cream
[Ref.: #23023]	Colony shape	circular
[Ref.: #23023]	Incubation period	2 days
[Ref.: #23023]	Cultivation medium used	10 % HM agar medium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16516]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #16516]

Culture medium growth

[Ref.: #16516]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16516]

Culture medium composition

expand / minimize

[Ref.: #23023]

Culture medium

10 % HM agar medium

[Ref.: #23023]

Culture medium growth

		Temperature
[Ref.: #16516]	growth	30 °C
[Ref.: #23023]	growth	15.0-45.0 °C
[Ref.: #23023]	optimum	37.0 °C
[Ref.: #67770]	growth	37 °C

	pH	Kind of pH		pH
[Ref.: #23023]			optimum	7.5
[Ref.: #23023]			growth	5.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23023]

Oxygen tolerance

obligate aerobe

[Ref.: #23023]	Spore description	ellipsoidal,terminal,in swollen sporangia
[Ref.: #23023]	Type of spore	endospore
[Ref.: #23023]	Ability of spore formation	yes
[Ref.: #69480]	Ability of spore formation	yes Confidence in %91.293
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

[Ref.: #23023]

Halophily / tolerance level

moderately halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23023]		NaCl		growth	0.5-25.0	%(w/v)
[Ref.: #23023]		NaCl		optimum	10.0	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23023]	casein	+	hydrolysis
[Ref.: #23023]	citrate ChEBI	-	carbon source
[Ref.: #23023]	D-arabinose ChEBI	-	builds acid from
[Ref.: #23023]	D-fructose ChEBI	+	builds acid from
[Ref.: #23023]	D-galactose ChEBI	-	builds acid from
[Ref.: #23023]	D-glucose ChEBI	+	builds acid from
[Ref.: #23023]	D-mannitol ChEBI	-	builds acid from
[Ref.: #23023]	D-mannose ChEBI	-	builds acid from
[Ref.: #23023]	D-xylose ChEBI	+	builds acid from
[Ref.: #23023]	dna ChEBI	+	hydrolysis
[Ref.: #23023]	esculin ChEBI	+	hydrolysis
[Ref.: #23023]	gelatin ChEBI	+	hydrolysis
[Ref.: #23023]	glucose ChEBI	-	fermentation
[Ref.: #23023]	glycerol ChEBI	+	builds acid from
[Ref.: #23023]	lactose ChEBI	-	builds acid from
[Ref.: #23023]	maltose ChEBI	-	builds acid from
[Ref.: #23023]	nitrate ChEBI	-	reduction
[Ref.: #23023]	pullulan ChEBI	+	hydrolysis
[Ref.: #23023]	starch ChEBI	-	hydrolysis
[Ref.: #23023]	sucrose ChEBI	+	builds acid from
[Ref.: #23023]	trehalose ChEBI	+	builds acid from
[Ref.: #23023]	tween 80 ChEBI	-	hydrolysis
[Ref.: #23023]	xylan ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #23023]	cephalothin ChEBI	yes	30	µg
[Ref.: #23023]	chloramphenicol ChEBI	yes	30	µg
[Ref.: #23023]	erythromycin ChEBI	yes	15	µg
[Ref.: #23023]	kanamycin ChEBI				yes	30	µg
[Ref.: #23023]	nalidixic acid ChEBI				yes	30	µg
[Ref.: #23023]	neomycin ChEBI				yes	10	µg
[Ref.: #23023]	novobiocin ChEBI	yes	30	µg
[Ref.: #23023]	penicillin g ChEBI				yes	10	Unit

	Metabolite	Production
[Ref.: #23023]	acetoin ChEBI	no
[Ref.: #23023]	hydrogen sulfide ChEBI	no
[Ref.: #23023]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Citrate test
[Ref.: #23023]	acetoin ChEBI	-
[Ref.: #23023]	citrate ChEBI			-
[Ref.: #23023]	glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #23023]	arginine decarboxylase	-	4.1.1.19
[Ref.: #23023]	beta-galactosidase	-	3.2.1.23
[Ref.: #23023]	catalase	+	1.11.1.6
[Ref.: #23023]	cytochrome oxidase	+	1.9.3.1
[Ref.: #23023]	lysine decarboxylase	-	4.1.1.18
[Ref.: #23023]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #23023]	phenylalanine deaminase	-	4.3.1.5
[Ref.: #23023]	phosphatase	+
[Ref.: #23023]	urease	-	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16516]	Sample type/isolated from	salted animal hides
[Ref.: #16516]	Geographic location (country and/or sea, region)	Istanbul
[Ref.: #16516]	Country	Turkey
[Ref.: #16516]	Country ISO 3 Code	TUR

[Ref.: #67770]	Sample type/isolated from	Salted animal hides

[Ref.: #23023]	Enrichment culture	R2A medium (Difco) supplemented with a mixture of 15 % salts
[Ref.: #23023]	Enrichment culture duration	7 days
[Ref.: #23023]	Enrichment culture temperature	37.0 ̊C
* marker position based on {}

Isolation sources categories

#Host Body-Site	#Organ	#Skin, Nail, Hair
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FN690978 (>99% sequence identity) for Thalassobacillus pellis from Microbeatlas

Aquatic Samples	2
Soil Samples	45
Animal Samples	4
Plant Samples
Total Samples	51

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16516]	Thalassobacillus pellis partial 16S rRNA gene, strain 18OM	FN690978	1470	GenBank ENA	748008 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thalassobacillus pellis DSM 22784	GCA_016908295	contig	GenBank ENA	748008 tax ID	*
[Ref.: #66792]	Thalassobacillus pellis strain DSM 22784	748008.3	wgs	PATRIC	748008 tax ID	*
[Ref.: #66792]	Thalassobacillus pellis DSM 22784	2901096299	draft	JGI IMG/M	748008 tax ID	*

[Ref.: #16516]

GC-content

42.9 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Thalassobacillus pellis strain DSM 22784 PATRIC: 748008.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thalassobacillus pellis strain DSM 22784 PATRIC: 748008.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	84.193	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	91.299	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	76.12	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	91.293	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	90.452	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	84.473	no

Availability in culture collections External links

[Ref.: #16516]

Culture collection no.

DSM 22784, CECT 7566, JCM 16412

[Ref.: #71044]

SI-ID 377312

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thalassobacillus pellis sp. nov., a moderately halophilic, Gram-positive bacterium isolated from salted hides.	Sanchez-Porro C, Yilmaz P, de la Haba RR, Birbir M, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.024778-0	2010	*

References

#16516

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22784

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23023

Cristina Sánchez-Porro,Pinar Yilmaz,Rafael R. de la Haba,Meral Birbir,Antonio Ventosa: Thalassobacillus pellis sp. nov., a moderately halophilic, Gram-positive bacterium isolated from salted hides. IJSEM 61: 1206 - 1210 2011 ( DOI 10.1099/ijs.0.024778-0 , PubMed 20562240 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71044

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID377312.1 )

* These data were automatically processed and therefore are not curated

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Thalassobacillus pellis strain DSM 22784

Thalassobacillus pellis strain DSM 22784

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