Paenibacillus polymyxa (CIP 102287, 263-86)

Name: Paenibacillus polymyxa (CIP 102287, 263-86)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137957

Type strain

Strain Designation 263-86

Culture col. no. CIP 102287 263-86

NCBI tax ID(s) 1406

Special Collections CIP

History CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 263-86 <- Fabrique des Tabacs Réunis, Neufchâtel, Switzerland, Bacillus polymyxa

Links

Paenibacillus polymyxa 263-86 is a facultative anaerobe, spore-forming, mesophilic prokaryote of the family Paenibacillaceae.

spore-forming Gram-positive motile rod-shaped facultative anaerobe mesophilic

Name and taxonomic classification

SI-ID 69570

CIP 102287

@ref 20215

Last LPSN update 2026-02-09 11:33:00

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus polymyxa

Full scientific name Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994

Synonyms (4)

"Clostridium polymyxa"
Bacillus polymyxa
Paenibacillus jamilae
"Aerobacillus polymyxa"

BacDive ID	Other strains from **Paenibacillus polymyxa** (36)	Type strain
11487	P. polymyxa DSM 36, ATCC 842, BUCSAV 162, CCM 1459, JCM ... (type strain)
11480	P. polymyxa DSM 292, CCM 1609, CCUG 26011, LMG 6320, ...
11481	P. polymyxa 354, DSM 356, ATCC 8523, CCM 1465, CIP A45, ...
11482	P. polymyxa II, DSM 365
11483	P. polymyxa III, DSM 372
11484	P. polymyxa X16, DSM 740, ATCC 31325
11485	P. polymyxa V3, X18, DSM 741, ATCC 31326
11486	P. polymyxa TS3, X20, DSM 742
11551	P. polymyxa B.3, B3, DSM 13815, CECT 5266, CIP 107276
135868	P. polymyxa CIP 103698
136141	P. polymyxa NRS-279, 8277, CIP A39, ATCC 7070, NRRL B-368
136173	P. polymyxa CIP 103121, CN 2366
136174	P. polymyxa 11D2, CIP 103124
137194	P. polymyxa NRS-252, CIP 52.77, NRRL B-367, NRRL: B-367
137195	P. polymyxa CIP 52.78, ATCC 7047, NRRL B-366, NRRL: B-366
137949	P. polymyxa 239-86, CIP 102271
138780	P. polymyxa CIP A43, NCTC 1380, NRRL NRS-1238, NRRL: ...
138795	P. polymyxa CIP A48
139222	P. polymyxa CIP A40
139230	P. polymyxa CIP A46, NRRL B-465, NRRL: B-465
140662	P. polymyxa EG2,
141599	P. polymyxa CCUG 3378, IAM 12566
145818	P. polymyxa CCUG 29690 A
146828	P. polymyxa CCUG 32191
147439	P. polymyxa CCUG 33583
148295	P. polymyxa CCUG 35174, ATCC 43865
151953	P. polymyxa CCUG 45338
161991	P. polymyxa JCM 17240, FERM P-19158
162756	P. polymyxa JCM 20106, IAM 1210, IFO 3020, NBRC 3020
162907	P. polymyxa JCM 20385, ATCC 10401, BUCSAV 163, CCM 1460, ...
165732	P. polymyxa JCM 8035, IAM 19064
165733	P. polymyxa JCM 8036, IAM 19068
165734	P. polymyxa JCM 8037, IAM 19077
165735	P. polymyxa JCM 8038, IAM 19110
165736	P. polymyxa JCM 8039, IAM 19111
174355	P. polymyxa MVY-024, DSM 114788

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
38907	positive	rod-shaped

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
38907	MEDIUM 3 - Columbia agar	Columbia agar (39.000 g);distilled water (1000.000 ml)
38907	CIP Medium 3		Medium recipe at CIP
38907	CIP Medium 72		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
38907	positive	growth	30	mesophilic
38907	positive	growth	22-45
38907	negative	growth	10
38907	negative	growth	55

Culture pH

@ref	Ability	Type	PH
38907	positive	growth	6

Physiology and metabolism

Oxygen tolerance

38907

Oxygen tolerancefacultative anaerobe

Spore formation

38907

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
38907	NaCl	positive	growth	0-6 %
38907	NaCl		growth	8 %
38907	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
38907	16947 ChEBI	citrate	-	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
38907	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
38907	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	+	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	+	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	+	builds acid from	from API 50CH acid
38907	17632 ChEBI	nitrate	+	reduction
38907	17632 ChEBI	nitrate	+	respiration
38907	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
38907	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
38907	15688 ChEBI	acetoin	-
38907	17234 ChEBI	glucose		+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
38907	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
38907	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
38907	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
38907	caseinase	+	3.4.21.50
38907	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
38907	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
38907	gamma-glutamyltransferase	-	2.3.2.2
38907	gelatinase	+
38907	lecithinase	+
68382	leucine arylamidase	-	3.4.11.1	from API zym
38907	lipase	-
68382	lipase (C 14)	-		from API zym
38907	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
38907	ornithine decarboxylase	-	4.1.1.17
38907	oxidase	-
38907	protease	+
68382	trypsin	-	3.4.21.4	from API zym
38907	tween esterase	+
38907	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
38907	-	-	+	+	-	-	-	-	-	-	-	+	+	+	-	-	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
38907	not determinedn.d.	+	-	-	+	+	+	-	-	+	+	+	+	+	-	+	-	+	+	-	+	+/-	+/-	+	+	+	+	+	+	+	+	+	+	-	-	+	-	-	-	+	+/-	-	-	-	-	-	-	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
38907	not determinedn.d.	+	-	+	+	+	-	+	-	+	-	-	-	+	+	+	+	+	+	+	+	+	+	+	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	+	-	+	+	-	-	-	-	-	-	-	+	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
38907		Neufchâtel	Switzerland	CHE	Europe
38907	Environment, Tobacco	Neuchâtel	Switzerland	CHE	Europe	1986

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
38907	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#38907	Collection of Institut Pasteur ; Curators of the CIP; CIP 102287
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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