Paenibacillus polymyxa (DSM 36, ATCC 842, BUCSAV 162)

Name: Paenibacillus polymyxa (DSM 36, ATCC 842, BUCSAV 162)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11487

Type strain

Culture col. no. DSM 36 ATCC 842 BUCSAV 162 CCM 1459 JCM 2507 22 more

NCBI tax ID(s) 1036171 1406

Special Collections DSMZ CCUG JCM KCTC CIP

History <- ATCC <- A.J. Kluyver CCM 1459 <-- BUCSAV 162 <-- NCIB 8158 <-- ATCC 842 <-- A. J. Kluyver. CIP <- 1966, ATCC, Bacillus polymyxa <- A.J. Kluyver

Links

Paenibacillus polymyxa DSM 36 is a facultative anaerobe, Gram-positive, motile bacterium of the family Paenibacillaceae.

Gram-positive motile rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 92295

LMG 13294,ATCC 842,CCM 1459,CCUG 7426,CECT 155,IAM 13419,JCM 2507,LMG 6319,NCFB 1774,NCIB 8158,NCTC 10343,NRRL B-4317,NCDO 1774,CCRC 11168,IFO 15309,NCIMB 8158,VKM B-514,CIP 66.22,LMD 24.16,NRRL NRS-1105,KCTC 3627,NBRC 15309,NCCB 24016,HAMBI 635,HAMBI 1897,CFBP 4258,BCRC 11168,CCT 0512,CCT 2479,KCTC 3858,KACC 10485,NBIMCC 3664,NCIMB 30165,NCIM 2539,CDBB 35,VKM B-5,VTT E-97008,VKM B-420,VKM B-703,DSM 36

@ref 20215

Last LPSN update 2026-02-09 11:20:34

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus polymyxa

Full scientific name Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994

Synonyms (4)

"Clostridium polymyxa"
Bacillus polymyxa
Paenibacillus jamilae
"Aerobacillus polymyxa"

BacDive ID	Other strains from **Paenibacillus polymyxa** (36)	Type strain
11480	P. polymyxa DSM 292, CCM 1609, CCUG 26011, LMG 6320, ...
11481	P. polymyxa 354, DSM 356, ATCC 8523, CCM 1465, CIP A45, ...
11482	P. polymyxa II, DSM 365
11483	P. polymyxa III, DSM 372
11484	P. polymyxa X16, DSM 740, ATCC 31325
11485	P. polymyxa V3, X18, DSM 741, ATCC 31326
11486	P. polymyxa TS3, X20, DSM 742
11551	P. polymyxa B.3, B3, DSM 13815, CECT 5266, CIP 107276
135868	P. polymyxa CIP 103698
136141	P. polymyxa NRS-279, 8277, CIP A39, ATCC 7070, NRRL B-368
136173	P. polymyxa CIP 103121, CN 2366
136174	P. polymyxa 11D2, CIP 103124
137194	P. polymyxa NRS-252, CIP 52.77, NRRL B-367, NRRL: B-367
137195	P. polymyxa CIP 52.78, ATCC 7047, NRRL B-366, NRRL: B-366
137949	P. polymyxa 239-86, CIP 102271
137957	P. polymyxa 263-86, CIP 102287
138780	P. polymyxa CIP A43, NCTC 1380, NRRL NRS-1238, NRRL: ...
138795	P. polymyxa CIP A48
139222	P. polymyxa CIP A40
139230	P. polymyxa CIP A46, NRRL B-465, NRRL: B-465
140662	P. polymyxa EG2,
141599	P. polymyxa CCUG 3378, IAM 12566
145818	P. polymyxa CCUG 29690 A
146828	P. polymyxa CCUG 32191
147439	P. polymyxa CCUG 33583
148295	P. polymyxa CCUG 35174, ATCC 43865
151953	P. polymyxa CCUG 45338
161991	P. polymyxa JCM 17240, FERM P-19158
162756	P. polymyxa JCM 20106, IAM 1210, IFO 3020, NBRC 3020
162907	P. polymyxa JCM 20385, ATCC 10401, BUCSAV 163, CCM 1460, ...
165732	P. polymyxa JCM 8035, IAM 19064
165733	P. polymyxa JCM 8036, IAM 19068
165734	P. polymyxa JCM 8037, IAM 19077
165735	P. polymyxa JCM 8038, IAM 19110
165736	P. polymyxa JCM 8039, IAM 19111
174355	P. polymyxa MVY-024, DSM 114788

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
121931	positive	rod-shaped

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2036	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
37333	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121931	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
2036	positive	growth	30
37333	positive	growth	30
67770	positive	growth	30
121931	positive	growth	22-45
121931	negative	growth	10
121931	negative	growth	55

Culture pH

@ref	Ability	Type	PH
121931	positive	growth	6

Physiology and metabolism

Oxygen tolerance

121931

Oxygen tolerancefacultative anaerobe

Spore formation

@ref	Spore formation	Confidence
125439		92.5

Compound production

2036

Compoundinhibitors for glycoside hydrolases

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121931	NaCl	positive	growth	0-2 %
121931	NaCl		growth	4 %
121931	NaCl		growth	6 %
121931	NaCl		growth	8 %
121931	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
121931	16947 ChEBI	citrate	-	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68379	16899 ChEBI	D-mannitol	+	fermentation	from API Coryne
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68379	65327 ChEBI	D-xylose	+	fermentation	from API Coryne
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
121931	4853 ChEBI	esculin	+	hydrolysis
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68379	28087 ChEBI	glycogen	+	fermentation	from API Coryne
68371	28087 ChEBI	glycogen	+	builds acid from	from API 50CH acid
121931	606565 ChEBI	hippurate	-	hydrolysis
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68379	17716 ChEBI	lactose	+	fermentation	from API Coryne
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	+	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
121931	17632 ChEBI	nitrate	+	reduction
121931	17632 ChEBI	nitrate	+	respiration
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
121931	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
121931	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
121931	15688 ChEBI	acetoin	+
121931	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121931	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121931	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
121931	beta-galactosidase	+	3.2.1.23
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
121931	caseinase	+	3.4.21.50
121931	catalase	+	1.11.1.6
68379	catalase	+	1.11.1.6	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
121931	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
121931	gamma-glutamyltransferase	-	2.3.2.2
121931	gelatinase	-
68379	gelatinase	+		from API Coryne
121931	lecithinase	+
68382	leucine arylamidase	-	3.4.11.1	from API zym
121931	lipase	+
68382	lipase (C 14)	-		from API zym
121931	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121931	ornithine decarboxylase	-	4.1.1.17
121931	oxidase	-
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
121931	tween esterase	-
121931	urease	-	3.5.1.5
68379	urease	-	3.5.1.5	from API Coryne
68382	valine arylamidase	-		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
44995	+	-	-	-	-	+	+	-	+	-	+	-	not determinedn.d.	+	+	+	+	+	+	+	+

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121931	-	-	+	+	-	-	-	-	-	+	+	+	+	+	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
121931	not determinedn.d.	+	-	-	+	+	+	-	-	+	+	+	+	+	-	+/-	-	-	+	-	-	+	+/-	+	+	+	+	+	+	+	+	+	+	+/-	+/-	+	+	+	-	+	+	-	-	-	-	-	-	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121931	not determinedn.d.	+	+	+	+	+	-	+	+	-	+	+	+	+	+	+	-	+	+	+	+	+	+	-	-	-	+	-	-	-	-	-	+	-	+	+	+	-	-	-	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2036	1	Risk group (German classification) According to TRBA 466
121931	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2281156v1 assembly for Paenibacillus polymyxa ATCC 842	complete	GCA_022811565	1036171.12	8005874595	1036171	97.99
124043	ASM1571097v1 assembly for Paenibacillus polymyxa DSM 36	complete	GCA_015710975	1406.267	8112414297	1406	96.37
67770	49508_G02 assembly for Paenibacillus polymyxa NCTC10343	contig	GCA_900454525	1406.162	2907128583	1406	78.8
67770	PPt02 assembly for Paenibacillus polymyxa ATCC 842	scaffold	GCA_000217775	1036171.3	2547132099	1036171	66.45
66792	B248 assembly for Paenibacillus polymyxa ATCC 842	scaffold	GCA_903797665	1036171.11	8119454613	1036171	52.32

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Paenibacillus polymyxa partial 16S rRNA gene, strain DSM 36T	AJ320493	1521	1406
20218	Paenibacillus polymyxa 16S ribosomal RNA gene, partial sequence	U60654	347	1406
20218	Paenibacillus polymyxa 16S ribosomal RNA gene, partial sequence	U60655	347	1406
20218	Paenibacillus polymyxa 16S ribosomal RNA gene, partial sequence	U60656	347	1406
20218	Paenibacillus polymyxa 16S ribosomal RNA gene, partial sequence	U60657	347	1406
20218	Paenibacillus polymyxa 16S ribosomal RNA gene, partial sequence	U60658	347	1406
20218	Paenibacillus polymyxa 16S ribosomal RNA gene, partial sequence	U60659	347	1406
20218	B.polymyxa 16SrRNA	X57308	1547	1406
20218	Paenibacillus polymyxa gene for 16S rRNA, partial sequence	AB006947	279	1406
20218	Paenibacillus polymyxa gene for 16S ribosomal RNA, partial sequence	AB042063	1504	1406
20218	Paenibacillus polymyxa gene for 16S rRNA, partial sequence, strain: IAM 13419	D16276	1491	1406
20218	Paenibacillus polymyxa strain KCTC3627 16S ribosomal RNA gene, partial sequence	AY359636	1438	1406
20218	Paenibacillus polymyxa gene for 16S rRNA, partial sequence	AB271758	1479	1406
20218	B.polymyxa 16S ribosomal RNA	X60632	1434	1406

GC content

@ref	GC-content (mol%)	Method
2036	45.6	Buoyant density centrifugation (BD)
2036	44.3	thermal denaturation, midpoint method (Tm)
67770	46.6	Buoyant density centrifugation (BD)
67770	44

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Paenibacillus polymyxa ATCC 842
NCBI: GCA_022811565

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	82.50	no
125439	gram_stain	BacteriaNetⓘ	variable	81.50	no
125439	motility	BacteriaNetⓘ	yes	87.60	no
125439	spore_formation	BacteriaNetⓘ	yes	92.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenibacillus polymyxa ATCC 842 ATCC 842
NCBI: GCA_022811565.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	65.68	no
125438	anaerobic	anaerobicⓘ	no	88.77	no
125438	aerobic	aerobicⓘ	no	64.30	yes
125438	spore-forming	spore-formingⓘ	yes	89.41	no
125438	thermophilic	thermophileⓘ	no	93.68	yes
125438	flagellated	motile2+ⓘ	yes	84.98	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genomic and phenotypic analyses reveal Paenibacillus polymyxa PJH16 is a potential biocontrol agent against cucumber fusarium wilt.	Yang F, Jiang H, Ma K, Hegazy A, Wang X, Liang S, Chang G, Yu L, Tian B, Shi X.	Front Microbiol	10.3389/fmicb.2024.1359263	2024
	MALDI-TOF as a powerful tool for identifying and differentiating closely related microorganisms: the strange case of three reference strains of Paenibacillus polymyxa.	Lebano I, Fracchetti F, Vigni ML, Mejia JF, Felis G, Lampis S.	Sci Rep	10.1038/s41598-023-50010-w	2024
	Genomic characterization and antifungal properties of Paenibacillus polymyxa YF, a promising biocontrol agent against Fusarium oxysporum pathogen of codonopsis root rot.	Li Y, Su X, Xi W, Zheng Y, Liu Y, Zheng W, Wei S, Leng Y, Tian Y.	Front Microbiol	10.3389/fmicb.2025.1549944	2025
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	Environmental Regulation of the Distribution and Ecology of Bdellovibrio and Like Organisms.	Williams HN, Chen H.	Front Microbiol	10.3389/fmicb.2020.545070	2020
	Hyaluronic acid-functionalized nanoarmor enhances the stable colonization ability of Paenibacillus polymyxa JF_P68 and boosts its biological control efficacy against pear anthracnose.	Du J, Li H, Liu S, Wu L, Liu Y, Li Y, Zhao X, Gao Q, Dong J, Lei C, Sun F, Tian X, Wang C, Lu N, Jiao Y.	Pest Manag Sci	10.1002/ps.8868	2025
	Preparation and Functional Characterization of Konjac Glucomannan Oligosaccharide as an Immunomodulator Against Pst DC3000 in Arabidopsis thaliana.	Rahman RMM, Li K, Zhao H, Jia X, Wang W, Gao J, Yin H.	J Agric Food Chem	10.1021/acs.jafc.5c07067	2025
	Exploring the agronomic traits, antioxidant and antifungal properties of Hermetia illucens frass extract in durum wheat (Triticum durum Desf.).	Vitti A, Coviello L, Falabella P, Mang SM, Scieuzo C, Iannielli F, Ronga D, Nuzzaci M.	BMC Plant Biol	10.1186/s12870-025-07086-5	2025
Genetics	Comparative Genomic Analysis of Three Paenibacillus polymyxa Strains Isolated from Termitarium and Identification of Novel Biosynthetic Gene Clusters.	Rathakrishnan B, Dhanalakshmi V, Rajendhran J.	Curr Microbiol	10.1007/s00284-025-04164-7	2025
Biotechnology	[Gluconobacter spp. and Paenibacillus polymyxa cause spoilage in apparently healthy commercial carrots].	Parra-Aguilar TJ, Yanez-Morales MJ, Almaraz-Sanchez A, Hernandez AJ, Aranda-Ocampo S.	Rev Argent Microbiol	10.1016/j.ram.2024.12.009	2025
	Enhancing 2,3-butanediol and acetoin production from brewer's spent grain hemicellulosic hydrolysate through bacterial co-cultivation.	Lopez-Linares JC, Rama E, Garcia-Cubero MT, Coca M, Perez CL, Yamakawa CK, Dragone G, Mussatto SI.	N Biotechnol	10.1016/j.nbt.2025.03.006	2025
	Plant Growth-Promoting Rhizobacteria Paenibacillus polymyxa HL14-3 Inoculation Enhances Drought Tolerance in Cucumber by Triggering Abscisic Acid-Mediated Stomatal Closure.	Qin Y, Wang X, Dong H, Ye T, Du N, Zhang T, Piao F, Dong X, Shen S, Guo Z.	J Agric Food Chem	10.1021/acs.jafc.4c09421	2025
	Identification of Key Amino Acids in the A Domains of Polymyxin Synthetase Responsible for 2,4-Diaminobutyric Acid Adenylation in Paenibacillus polymyxa NBRC3020 Strain.	Nemoto M, Ando W, Mano T, Lee M, Yuzawa S, Mizuno T.	ACS Chem Biol	10.1021/acschembio.4c00553	2025
	Harnessing functional feed additives for sustainable production: the role of Bacillus coagulans and Paenibacillus polymyxa mixture in improving production and health of meat-type quails.	Reda FM, Alagawany M, Salah AS, Almutairi LA, Alqahtani MA, Alamoudi SA, Altuwaijri S, El-Tarabily KA, El-Saadony MT.	Front Vet Sci	10.3389/fvets.2025.1639681	2025
	Molecular Imaging of Microbially Induced Corrosion of Synthetic Archeological Glasses by a Rhizosphere Bacterium.	Parker GD, Plymale A, Ievlev A, Zhu Z, Hager J, Hanley L, Yu XY.	Anal Chem	10.1021/acs.analchem.5c01183	2025
	Screening and identification of Paenibacillus polymyxa GRY-11 and its biological control potential against apple replant disease.	Li X, Wang J, Lv Y, Zhao L, Jiang W, Lv J, Xu X, Yu Y, Liu Y, Chen X, Yin C, Mao Z.	Folia Microbiol (Praha)	10.1007/s12223-024-01196-7	2025
	Paenibacillus polymyxa J2-4 induces cucumber to enrich rhizospheric Pseudomonas and contributes to Meloidogyne incognita management under field conditions.	Shi Q, Fu Q, Zhang J, Hao G, Liang C, Duan F, Ma J, Zhao H, Song W.	Pest Manag Sci	10.1002/ps.8429	2025
	Antifungal, growth-promoting, and lignocellulose degrading-bacteria from compost and casing soil of button mushroom (Agaricus bisporus).	Kumar A, Verma R, Sharma VP, Kumar S, Kamal S, Goyanka J, Sharma S, Sharma P.	Environ Sci Pollut Res Int	10.1007/s11356-025-36325-3	2025
	The Reverse Ecology-Based Approach to Design a Bacterial Consortium as Soybean Bioinoculant.	Goncalves OS, Fernandes AS, Santana MF.	Curr Microbiol	10.1007/s00284-024-03926-z	2024
	Paenibacillus spp. may facilitate anaerobic soil disinfestation at low temperatures	Pitti E, Momma N, Kobara Y, Usami T, Shishido M.	J Gen Plant Pathol	10.1007/s10327-024-01200-5	2024
	Heterologous Expression of the Nitrogen-Fixing Gene Cluster from Paenibacillus polymyxa in Bacillus subtilis.	Wang X, Gao S, Fu J, Li R.	Microorganisms	10.3390/microorganisms13061320	2025
Genetics	Isolation and genome characterization of Paenibacillus polymyxa 188, a potential biocontrol agent against fungi.	Shih SY, Huang YS, Chou KR, Wu HY, Tsai H.	J Appl Microbiol	10.1093/jambio/lxae075	2024
	Seed coating with biocontrol bacteria encapsulated in sporopollenin exine capsules for the control of soil-borne plant diseases.	Fan TF, Luan YY, Xiang S, Shi YX, Xie XW, Chai AL, Li L, Li BJ.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.136093	2024
	Efficacy of Selected Bacterial Strains in the Protection and Growth Stimulation of Winter Wheat and Maize.	Filipczak A, Sobiech L, Wita A, Marecik R, Bialas W, Drozdzynska A, Grzanka M, Danielewicz J, Szulc P.	Plants (Basel)	10.3390/plants14050636	2025
Biotechnology	Suppression of Strawberry Anthracnose by Paenibacillus polymyxa TP3 In Situ and from a Distance.	Lee BY, Chen PL, Chen CY.	Plant Dis	10.1094/pdis-08-23-1499-re	2024
Genetics	CRISPR-Cas9-Mediated Genome Editing in Paenibacillus polymyxa.	Ravagnan G, Meliawati M, Schmid J.	Methods Mol Biol	10.1007/978-1-0716-3658-9_16	2024
	Synergistic Effects of Paenibacillus polymyxa NBmelon-1 Inoculation and Grafting Restructure of Rhizosphere Microbiome and Enhanced Disease Resistance in Melon Self-Rootstocks.	Dong W, Zang Q, Wang Y, Ma E, Ding W, Yan L, Hao F.	Microorganisms	10.3390/microorganisms13061172	2025
	Exploration of the Native Sucrose Operon Enables the Development of an Inducible T7 Expression System in Paenibacillus polymyxa.	Wang Z, Guo Z, Xin Y, Gu Z, Shi Y, Yang T, Li Y, Shi G, Ding Z, Zhang L.	ACS Synth Biol	10.1021/acssynbio.3c00689	2024
	Development of chitosan/carrageenan macrobeads for encapsulation of Paenibacillus polymyxa and its biocontrol efficiency against clubroot disease in Brassica crops.	Kang H, Fan T, Lin Z, Shi Y, Xie X, Li L, Xiang S, Yuan X, Li X, Li B, Chai A.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.130323	2024
	Efficacy of 2-undecanol produced by Paenibacillus polymyxa KM2501-1 in controlling Meloidogyne incognita.	Yang F, Dai W, Xue H, Chen W, Liu C, Tian Y, Cheng W, Zhang J.	Microbiol Spectr	10.1128/spectrum.03062-24	2025
Enzymology	Exopolysaccharides of Paenibacillus polymyxa: A review.	Huang XY, Ye XP, Hu YY, Tang ZX, Zhang T, Zhou H, Zhou T, Bai XL, Pi EX, Xie BH, Shi LE.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.129663	2024
Genetics	Biocontrol Efficacy and Induced Resistance of Paenibacillus polymyxa J2-4 Against Meloidogyne incognita Infection in Cucumber.	Shi Q, Zhang J, Fu Q, Hao G, Liang C, Duan F, Zhao H, Song W.	Phytopathology	10.1094/phyto-03-23-0091-r	2024
	Studying microbially induced corrosion on glass using ToF-SIMS.	Parker GD, Plymale A, Hager J, Hanley L, Yu XY.	Biointerphases	10.1116/6.0003883	2024
Transcriptome	Mechanisms on salt tolerant of Paenibacillus polymyxa SC2 and its growth-promoting effects on maize seedlings under saline conditions.	Wang C, Pei J, Li H, Zhu X, Zhang Y, Wang Y, Li W, Wang Z, Liu K, Du B, Jiang J, Zhao D.	Microbiol Res	10.1016/j.micres.2024.127639	2024
Phylogeny	Extracellular ligninases production and lignin degradation by Paenibacillus polymyxa.	Edith Ayala-Rodriguez A, Valdes-Rodriguez S, Enrique Olalde-Mathieu V, Arias-Padro M, Reyes-Moreno C, Olalde-Portugal V.	J Gen Appl Microbiol	10.2323/jgam.2023.12.001	2024
	Response of Paenibacillus polymyxa SC2 to the stress of polymyxin B and a key ABC transporter YwjA involved.	Li H, E W, Zhao D, Liu H, Pei J, Du B, Liu K, Zhu X, Wang C.	Appl Microbiol Biotechnol	10.1007/s00253-023-12916-3	2024
	Paenibacillus exopolysaccharide alleviates Malassezia-induced skin damage: Enhancing skin barrier function, regulating immune responses, and modulating microbiota.	Xie WY, Shen HL, Yan ZM, Zheng RJ, Jiang JJ, Zhong JJ, Zhou WW.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.135404	2024
	Development of PMA-qPCR assay to accurately and reproducible quantify viable bacteria of Paenibacillus polymyxa.	Guo J, Fan F, Wang W, Wan M, Li Y.	Lett Appl Microbiol	10.1093/lambio/ovad127	2023
	Characterization of the antagonistic secondary metabolites of Paenibacillus polymyxa MEZ6 against Staphylococcus aureus.	Zhao N, Huang M, Yang Y, Cai R, Peng J, Guo G.	Front Microbiol	10.3389/fmicb.2025.1617807	2025
Enzymology	Regulation of the Ald gene encoding alanine dehydrogenase and its induction of ammonium-tolerant nitrogen fixation in Paenibacillus polymyxa WLY78.	Zhang H, Han Y, Tan H, Li Q, Chen S.	Microb Cell Fact	10.1186/s12934-025-02823-9	2025
	Combinatorial metabolic engineering of Bacillus subtilis for de novo production of polymyxin B.	Sun HZ, Li Q, Shang W, Qiao B, Xu QM, Cheng JS.	Metab Eng	10.1016/j.ymben.2024.04.001	2024
	An endophytic Paenibacillus polymyxa hg18 and its biocontrol potential against Fusarium oxysporum f. sp. cucumerinum	Cai F, Yang C, Ma D, osei R, Jin M, Zhang C, Wang Y.	Biol Control	10.1016/j.biocontrol.2023.105380	2023
	Efficacy of rhizobacteria Paenibacillus polymyxa SY42 for the biological control of Atractylodes chinensis root rot.	Xie S, Si H, Xue Y, Zhou R, Wang S, Duan Y, Niu J, Wang Z.	Microb Pathog	10.1016/j.micpath.2023.106517	2024
	Cloning, Expression, Purification, and Characterization of a Novel beta-Galactosidase/alpha-L-Arabinopyranosidase from Paenibacillus polymyxa KF-1.	Cui J, Wang Y, Zhou A, He S, Mao Z, Cao T, Wang N, Yuan Y.	Molecules	10.3390/molecules28227464	2023
	Limiting acetoin generation during 2,3-butanediol fermentation with Paenibacillus polymyxa using lignocellulosic hydrolysates.	Stoklosa RJ, Garcia-Negron V, Latona RJ, Toht M.	Bioresour Technol	10.1016/j.biortech.2023.130053	2024
	Volatile organic compounds produced by Paenibacillus polymyxa J2-4 exhibit toxic activity against Meloidogyne incognita.	Song W, Dai M, Gao S, Mi Y, Zhang S, Wei J, Zhao H, Duan F, Liang C, Shi Q.	Pest Manag Sci	10.1002/ps.7859	2024
	Rheological characterization of artificial paenan compositions produced by Paenibacillus polymyxa DSM 365.	Schilling C, Gansbiller M, Ruhmann B, Sieber V, Schmid J.	Carbohydr Polym	10.1016/j.carbpol.2023.121243	2023
	Paenibacillus polymyxa (LM31) as a new feed additive: Antioxidant and antimicrobial activity and its effects on growth, blood biochemistry, and intestinal bacterial populations of growing Japanese quail	Alagawany M, Madkour M, El-Saadony MT, Reda FM.	Anim Feed Sci Technol	10.1016/j.anifeedsci.2021.114920	2023
	Metabolic engineering of Paenibacillus polymyxa for effective production of 2,3-butanediol from poplar hydrolysate.	Zhang J, Zhao J, Fu Q, Liu H, Li M, Wang Z, Gu W, Zhu X, Lin R, Dai L, Liu K, Wang C.	Bioresour Technol	10.1016/j.biortech.2023.130002	2024
	Coating Seeds with Paenibacillus polymyxa ZF129 Microcapsule Suspension Enhanced Control Effect on Fusarium Root Rot and Promoted Seedling Growth in Cucumber.	Ma J, Liu J, Shi Y, Xie X, Chai A, Xiang S, Sun X, Li L, Li B, Fan T.	Biology (Basel)	10.3390/biology14040375	2025
	Eco-Friendly Biomass Production and Identification of Active Compounds of Paenibacillus polymyxa EB.KN35 with Potent Anti-Fusarium oxysporum Effect.	Ngo VA, Nguyen AD, Wang SL, Phan TQ, Tran THT, Nguyen DS, Nguyen VB.	Microorganisms	10.3390/microorganisms13040800	2025
	Relevance of plant growth-promoting bacteria in reducing the severity of tomato wilt caused by Fusarium oxysporum f. sp. lycopersici by altering metabolites and related genes.	Ansari WA, Krishna R, Kashyap SP, Al-Anazi KM, Abul Farah M, Jaiswal DK, Yadav A, Zeyad MT, Verma JP.	Front Microbiol	10.3389/fmicb.2024.1534761	2024
	CRISPR-Cas9 driven structural elucidation of the heteroexopolysaccharides from Paenibacillus polymyxa DSM 365	Schilling C, Klau LJ, Aachmann FL, Ruhmann B, Schmid J, Sieber V.	Carbohydrate polymers.		2023
Phylogeny	Characterization and identification of hot pepper-associated endospore-forming bacteria with potential applications as biofertilizers and in biocontrol of pepper wilt pathogens.	Tola SD, Muleta D, Assefa F, Ghadamgahi F, Vetukuri RR, Meressa BH.	BMC Microbiol	10.1186/s12866-025-03896-7	2025
Genetics	Harnessing an anti-CRISPR protein for powering CRISPR/Cas9-mediated genome editing in undomesticated Bacillus strains.	Kim MS, Jeong DE, Choi SK.	Microb Cell Fact	10.1186/s12934-025-02776-z	2025
	PGPR and nutrient consortia promoted cotton growth, antioxidant enzymes, and mineral uptake by suppressing sooty mold in arid climate.	Luqman M, Ahmad M, Dar A, Hussain A, Zulfiqar U, Mumtaz MZ, Mustafa A, Mustafa AEMA, Elshikh MS.	Front Microbiol	10.3389/fmicb.2025.1551465	2025
	CRISPR-Cas9 driven structural elucidation of the heteroexopolysaccharides from Paenibacillus polymyxa DSM 365.	Schilling C, Klau LJ, Aachmann FL, Ruhmann B, Schmid J, Sieber V.	Carbohydr Polym	10.1016/j.carbpol.2023.120763	2023
	Simultaneous online monitoring of viscosity and oxygen transfer rate in shake flask cultures.	Hanke R, Sieben M, Finger M, Schnoor K, Jessberger S, Weyand J, de la Fuente LC, Mann M, Azizan A, Kosfeld U, Buchs J.	J Biol Eng	10.1186/s13036-025-00552-6	2025
	Formation of a Novel Antagonistic Bacterial Combination to Enhance Biocontrol for Cucumber Fusarium Wilt.	Yang F, Wang X, Jiang H, Chang X, Chen W, Shi G, Tian B, Yao Q.	Microorganisms	10.3390/microorganisms13010133	2025
	Isolation and identification of antagonistic bacteria of Angelica root rot and their mechanism as biological control	Zhang Z, Zhang W, Wang X, Kou Z, Wang Y, Islam R, Zhang J, Liu L, Shen T, Tian Y.	Biol Control		2024
	Characterization of a novel GH26 beta-mannanase from Paenibacillus polymyxa and its application in the production of mannooligosaccharides.	Gao J, Zheng H, Wang X, Li Y.	Enzyme Microb Technol	10.1016/j.enzmictec.2023.110197	2023
Enzymology	Advancing sustainable practices with Paenibacillus polymyxa: From soil health to medical applications and molecular engineering.	Zalila-Kolsi I, Al-Barazie R.	AIMS Microbiol	10.3934/microbiol.2025016	2025
Biotechnology	Paenibacillus peoriae: current knowledge and agricultural biotechnology potential of a close relative of P. polymyxa.	Dobrzynski J, Kulkova I.	Antonie Van Leeuwenhoek	10.1007/s10482-025-02135-3	2025
	Microbial weathering of montmorillonite and its implication for Cd(II) immobilization.	Liu X, Laipan M, Zhang C, Zhang M, Wang Z, Yuan M, Guo J.	Chemosphere	10.1016/j.chemosphere.2023.140850	2024
	Optimization of Screening Media to Improve Antimicrobial Biodiscovery from Soils in Undergraduate/Citizen Science Research-Engaged Initiatives.	McPhillips L, O'Callaghan J, Shortiss C, Jackson SA, O'Leary ND.	Antibiotics (Basel)	10.3390/antibiotics13100956	2024
	Combination of fluorescent reagents with 2-(4-aminophenyl) benzothiazole and safranin O was useful for analysis of spore structure, indicating the diversity of Bacillales species spores.	Kuwana R, Ito K, Takamatsu H.	Front Microbiol	10.3389/fmicb.2025.1603957	2025
	Two species-specific TaqMan-based quantitative polymerase chain reaction assays for the detection in soil of Paenibacillus polymyxa inocula.	Manfredini A, Malusa E, Trzcinski P, Ptaszek M, Sas-Paszt L, Mocali S, Pinzari F, Canfora L.	J Appl Microbiol	10.1093/jambio/lxac048	2023
	Screening of Endophytic Antagonistic Bacteria in Wheat and Evaluation of Biocontrol Potential against Wheat Stripe Rust.	Saimi A, Zhang Q, Liu Q, Li G, Gao H, Chen J.	Plants (Basel)	10.3390/plants13101366	2024
	Biological activity of silver nanoparticles synthesized with Paenibacillus polymyxa exopolysaccharides.	Tregubova KV, Yegorenkova IV, Grinev VS, Fomin AS.	Enzyme Microb Technol	10.1016/j.enzmictec.2022.110174	2023
	Thermal Sensitivity of the Enzymatic Activity of beta-Glucosidase: Simulations Lend Mechanistic Insights into Experimental Observations.	Sahu S, Ghosh S, Sinha SK, Datta S, Sengupta N.	Biochemistry	10.1021/acs.biochem.3c00387	2023
	Biocontrol Agents Inhibit Banana Fusarium Wilt and Alter the Rooted Soil Bacterial Community in the Field.	Du C, Yang D, Jiang S, Zhang J, Ye Y, Pan L, Fu G.	J Fungi (Basel)	10.3390/jof10110771	2024
Genetics	Screening of new Paenibacillus polymyxa S3 and its disease resistance of grass carp (Ctenopharyngodon idellus).	Yang S, Jin D, Li H, Jiang L, Cui J, Huang W, Rang J, Li Y, Xia L.	J Fish Dis	10.1111/jfd.13714	2023
	Draft genome sequences of representative Paenibacillus polymyxa, Bacillus cereus, Fictibacillus sp., and Brevibacillus agri strains isolated from Amazonian dark earth.	Pellegrinetti TA, Cunha IDCMd, Chaves MGd, Freitas ASd, Silva AVRd, Tsai SM, Mendes LW.	Microbiol Resour Announc	10.1128/mra.00574-23	2023
	Characterization of root endophytic Paenibacillus polymyxa isolates with biocontrol activity against Xanthomonas translucens and Fusarium graminearum	Taheri E, Tarighi S, Taheri P.	Biol Control	10.1016/j.biocontrol.2022.105031	2022
Phylogeny	The interplay between the inoculation of plant growth-promoting rhizobacteria and the rhizosphere microbiome and their impact on plant phenotype.	Cunha ICMD, Silva AVRD, Boleta EHM, Pellegrinetti TA, Zagatto LFG, Zagatto SDSS, Chaves MG, Mendes R, Patreze CM, Tsai SM, Mendes LW.	Microbiol Res	10.1016/j.micres.2024.127706	2024
	Discovery of a Novel Antimicrobial Peptide from Paenibacillus sp. Na14 with Potent Activity Against Gram-Negative Bacteria and Genomic Insights into Its Biosynthetic Pathway	Songnaka N, Ratanaphan A, Sermkaew N, Sawatdee S, Krobthong S, Aonbangkhen C, Yingchutrakul Y, Atipairin A.	Antibiotics (Basel)		2025
	Engineering the carbon and redox metabolism of Paenibacillus polymyxa for efficient isobutanol production.	Meliawati M, Volke DC, Nikel PI, Schmid J.	Microb Biotechnol	10.1111/1751-7915.14438	2024
	Enhancement of antibacterial and growth-promoting effects of Paenibacillus polymyxa by optimizing its fermentation process.	Liu S, Liu H, Zhou L, Cheng Z, Wan J, Pan Y, Xu G, Huang F, Wang M, Xiong Y, Hu G.	J Appl Microbiol	10.1111/jam.15750	2022
	Implementation of Spore Display in Paenibacillus polymyxa with Different Hydrolytic Enzymes.	Zander M, Schmid J, Kabisch J.	Microorganisms	10.3390/microorganisms12071438	2024
	Algicidal interaction between Paenibacillus polymyxa MEZ6 and microalgae.	Zhao N, Yi L, Ren S, Yin Q, Xiang W, Zhang X, Xie B.	J Appl Microbiol	10.1111/jam.15592	2022
Phylogeny	Decrease in beneficial bacteria and increase in harmful bacteria in Gastrodia seedlings and their surrounding soil are mainly responsible for degradation of Gastrodia asexual propagation.	Wang X, Gao Y, Zang P, Zhang G, Yang X, Liu Q.	Front Plant Sci	10.3389/fpls.2024.1334958	2024
	Co-inoculation of the endophytes Bacillus thuringiensis CAPE95 and Paenibacillus polymyxa CAPE238 promotes Tropaeolum majus L. growth and enhances its root bacterial diversity.	Dal'Rio I, Lopes EDS, Santaren KCF, Rosado AS, Seldin L.	Front Microbiol	10.3389/fmicb.2024.1356891	2024
	Global gene-mining strategy for searching nonribosomal peptides as antimicrobial agents from microbial sources	Han P, Ma A, Ning Y, Chen Z, Liu Y, Liu Z, Li S, Jia Y.	Lebensm Wiss Technol		2023
	Visualization and characterization of spore morphogenesis in Paenibacillus polymyxa ATCC39564.	Abe K, Kato H, Hasegawa Y, Yamamoto T, Nomura N, Obana N.	J Gen Appl Microbiol	10.2323/jgam.2021.10.006	2022
	Management of bacterial wilt caused by Curtobacterium flaccumfacienspv.flaccumfaciens in common bean (Phaseolus vulgaris) using rhizobacterial biocontrol agents.	Munene L, Mugweru J, Mwirichia R.	Lett Appl Microbiol	10.1093/lambio/ovac011	2023
Genetics	Genome reduction in Paenibacillus polymyxa DSM 365 for chassis development.	Ravagnan G, Lesemann J, Muller MF, Poehlein A, Daniel R, Noack S, Kabisch J, Schmid J.	Front Bioeng Biotechnol	10.3389/fbioe.2024.1378873	2024
	The Potential Biocontrol Agent Paenibacillus polymyxa TP3 Produces Fusaricidin-Type Compounds Involved in the Antagonism Against Gray Mold Pathogen Botrytis cinerea.	Tsai SH, Chen YT, Yang YL, Lee BY, Huang CJ, Chen CY.	Phytopathology	10.1094/phyto-04-21-0178-r	2022
	Cloning, Expression, Purification, and Characterization of a Novel beta-Galactosidase/alpha-L-Arabinopyranosidase from Paenibacillus polymyxa KF-1	Cui J, Wang Y, Zhou A, He S, Mao Z, Cao T, Wang N, Yuan Y.	Molecules		2023
	Dietary Paenibacillus polymyxa AM20 as a new probiotic: Improving effects on IR broiler growth performance, hepatosomatic index, thyroid hormones, lipid profile, immune response, antioxidant parameters, and caecal microorganisms.	Zhou L, Abouelezz K, Momenah MA, Bajaber MA, Baazaoui N, Taha TF, Awad AE, Alamoudi SA, Beyari EA, Alanazi YF, Allohibi A, Saad AM.	Poult Sci	10.1016/j.psj.2023.103239	2024
	Inducing the production of the bacteriocin paenibacillin by Paenibacillus polymyxa through application of environmental stresses with relevance to milk bio-preservation.	El-Sharoud WM, Zalma SA, Yousef AE.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2022.109637	2022
	CRISPR-Cas9-mediated Large Cluster Deletion and Multiplex Genome Editing in Paenibacillus polymyxa.	Meliawati M, Teckentrup C, Schmid J.	ACS Synth Biol	10.1021/acssynbio.1c00565	2022
	Evaluation of an automated antimicrobial susceptibility testing system performance for colistin susceptibility in carbapenem-resistant Acinetobacter baumannii isolates.	Ilki A, Akilli FM, Ozsoy SA, Saygi Z, Yuceel-Timur I.	Microbiol Spectr	10.1128/spectrum.00859-25	2025
Genetics	Genome-Driven Analysis Reveals the Biotechnological Potential of a Novel Paenibacillus sp. Isolated From Crude Oil.	Dos Anjos Almeida JV, Nobrega Mendonca CM, Moreira LM, Pinheiro de Souza Oliveira RP, de Mello Varani A, de Medeiros Oliveira M.	Microbiologyopen	10.1002/mbo3.70159	2025
	Production of highly pure R,R-2,3-butanediol for biological plant growth promoting agent using carbon feeding control of Paenibacillus polymyxa MDBDO.	Ju JH, Jo MH, Heo SY, Kim MS, Kim CH, Paul NC, Sang H, Oh BR.	Microb Cell Fact	10.1186/s12934-023-02133-y	2023
	Nosocomial Bacteria Inhibition with Polymyxin B: In Silico Gene Mining and In Vitro Analysis.	Chunduru J, LaRoe N, Garza J, Hamood AN, Pare PW.	Antibiotics (Basel)	10.3390/antibiotics13080745	2024
	Harnessing bacterial strain from rhizosphere to develop indigenous PGPR consortium for enhancing lobia (Vigna unguiculata) production	Verma JP, Jaiswal DK, Gaurav AK, Mukherjee A, Krishna R, Prudencio de Araujo Pereira A.	Heliyon.		2023
	Paenibacillus polymyxa Antagonism towards Fusarium: Identification and Optimisation of Antibiotic Production.	Ran J, Wu Y, Zhang B, Su Y, Lu N, Li Y, Liang X, Zhou H, Shi J.	Toxins (Basel)	10.3390/toxins15020138	2023
Metabolism	Fusaricidin Biosynthesis Is Controlled via a KinB-Spo0A-AbrB Signal Pathway in Paenibacillus polymyxa WLY78.	Li Y, Zhang H, Li Y, Chen S.	Mol Plant Microbe Interact	10.1094/mpmi-05-21-0117-r	2021
	Isolation and Characterization of Paenibacillus polymyxa B7 and Inhibition of Aspergillus tubingensis A1 by Its Antifungal Substances.	Zhao T, Ma J, Lin M, Gao C, Zhao Y, Li X, Sun W.	Int J Mol Sci	10.3390/ijms25042195	2024
	Structural elucidation of the fucose containing polysaccharide of Paenibacillus polymyxa DSM 365.	Schilling C, Klau LJ, Aachmann FL, Ruhmann B, Schmid J, Sieber V.	Carbohydr Polym	10.1016/j.carbpol.2021.118951	2022
	Structure modification of an antibiotic: by engineering the fusaricidin bio-synthetase A in Paenibacillus polymyxa.	Li Y, Chen S.	Front Microbiol	10.3389/fmicb.2023.1239958	2023
	Identification of a New Pathogenic fungi Causing Sorghum Leaf Spot Disease and Its Management Using Natural Product and Microorganisms.	Wei G, Zhao W, Hu A, Ren M, Huang Y, Xu H.	Microorganisms	10.3390/microorganisms11061431	2023
	Abh, AbrB3, and Spo0A play distinct regulatory roles during polymyxin synthesis in Paenibacillus polymyxa SC2.	Cui Y, Zhao D, Liu K, Mei X, Sun S, Du B, Ding Y.	Microbiol Spectr	10.1128/spectrum.02293-23	2024
	Paenibacillus as a Biocontrol Agent for Fungal Phytopathogens: Is P. polymyxa the Only One Worth Attention?	Dobrzynski J, Nazieblo A.	Microb Ecol	10.1007/s00248-024-02450-8	2024
	Enhancement of polymyxin B1 production by an artificial microbial consortium of Paenibacillus polymyxa and recombinant Corynebacterium glutamicum producing precursor amino acids.	Sun HZ, Wei SY, Xu QM, Shang W, Li Q, Cheng JS, Yuan YJ.	Synth Syst Biotechnol	10.1016/j.synbio.2024.01.015	2024
	Causes of polymyxin treatment failure and new derivatives to fill the gap.	Chiu S, Hancock AM, Schofner BW, Sniezek KJ, Soto-Echevarria N, Leon G, Sivaloganathan DM, Wan X, Brynildsen MP.	J Antibiot (Tokyo)	10.1038/s41429-022-00561-3	2022
	Dietary supplementation with blended essential oils improves meat quality of broilers through SCFA-mediated gut-muscle axis.	Malhi KK, Chen J, Wang TH, Huang MY, Xing KP, Xing HB, Song M, Kumar C, Zou XH, Li JL.	Poult Sci	10.1016/j.psj.2025.105911	2025
	Structural studies of beta-glucosidase from the thermophilic bacterium Caldicellulosiruptor saccharolyticus.	Sotiropoulou AI, Hatzinikolaou DG, Chrysina ED.	Acta Crystallogr D Struct Biol	10.1107/s2059798324009252	2024
Metabolism	Effect of exopolysaccharides of Paenibacillus polymyxa rhizobacteria on physiological and morphological variables of wheat seedlings.	Yegorenkova IV, Tregubova KV, Krasov AI, Evseeva NV, Matora LY.	J Microbiol	10.1007/s12275-021-0623-9	2021
	Biocontrol potential of lipopeptides produced by Paenibacillus polymyxa AF01 against Neoscytalidium dimidiatum in pitaya.	Lin S, Chen X, Xie L, Zhang Y, Zeng F, Long Y, Ren L, Qi X, Wei J.	Front Microbiol	10.3389/fmicb.2023.1188722	2023
	Enhancing titre and production stability of paenibacillin from Paenibacillus polymyxa by sequential drug resistance screening.	Campbell EP, Hussein WE, Huang E, Yousef AE.	J Appl Microbiol	10.1111/jam.15165	2021
	Design and Evaluation of Synthetic Microbial Communities for Effective Fire Blight Disease Control in Apples.	Lee Y, Kim DR, Kwak YS.	J Microbiol Biotechnol	10.4014/jmb.2501.01047	2025
	Seed Pelleting with Gum Arabic-Encapsulated Biocontrol Bacteria for Effective Control of Clubroot Disease in Pak Choi.	Abdukerim R, Xiang S, Shi Y, Xie X, Li L, Chai A, Li B, Fan T.	Plants (Basel)	10.3390/plants12213702	2023
	In vitro antagonism and biocontrol effects of Paenibacillus polymyxa JY1-5 against Botrytis cinerea in tomato	Zhang Q, Xing C, Li S, He L, Qu T, Chen X.	Biol Control	10.1016/j.biocontrol.2021.104689	2021
	Influence of C3'- and C4'-substitutions on fluorescence, crystal packing, and physicochemical properties of flavonol.	Demidov OO, Chepeleva LV, Shishkina SV, Gladkov ES, Kyrychenko A, Linnik RP, Roshal AD.	RSC Adv	10.1039/d5ra05790f	2025
	Paenibacillus polymyxa, a Jack of all trades.	Langendries S, Goormachtig S.	Environ Microbiol	10.1111/1462-2920.15450	2021
	Purification and characterization of two new antimicrobial molecules produced by an endophytic strain of Paenibacillus polymyxa.	Serrano NFG, Ferreira D, Rodrigues-Filho E, Teixeira JA, Dubreuil JD, Sousa CP.	An Acad Bras Cienc	10.1590/0001-3765202120200486	2021
	Biocontrol of Soft Rot Dickeya and Pectobacterium Pathogens by Broad-Spectrum Antagonistic Bacteria within Paenibacillus polymyxa Complex.	Hossain A, Ali MA, Lin L, Luo J, You Y, Masum MMI, Jiang Y, Wang Y, Li B, An Q.	Microorganisms	10.3390/microorganisms11040817	2023
Genetics	Genomics assisted functional characterization of Paenibacillus polymyxa HK4 as a biocontrol and plant growth promoting bacterium.	Soni R, Rawal K, Keharia H.	Microbiol Res	10.1016/j.micres.2021.126734	2021
	Characterization of Antagonistic Bacteria Paenibacillus polymyxa ZYPP18 and the Effects on Plant Growth.	Li X, Ma S, Meng Y, Wei W, Peng C, Ling C, Fan S, Liu Z.	Plants (Basel)	10.3390/plants12132504	2023
Metabolism	Antigenotoxic potential of the fermentation broth produced by Paenibacillus polymyxa RNC-D in vitro.	Bianchi J, Cavicchioli R, Kubota LT, Carrilho E, de Sousa CP, Freitas Anibal F.	Future Microbiol	10.2217/fmb-2020-0176	2021
	Development of a chemically defined medium for Paenibacillus polymyxa by parallel online monitoring of the respiration activity in microtiter plates.	Goldmanns J, Rohling GA, Lipa MK, Scholand T, Deitert A, May T, Haas EP, Boy M, Herold A, Buchs J.	BMC Biotechnol	10.1186/s12896-023-00793-7	2023
Metabolism	Exploration of GH94 Sequence Space for Enzyme Discovery Reveals a Novel Glucosylgalactose Phosphorylase Specificity.	De Doncker M, De Graeve C, Franceus J, Beerens K, Kren V, Pelantova H, Vercauteren R, Desmet T.	Chembiochem	10.1002/cbic.202100401	2021
	Ameliorative effects of biofertilizers on yield, water use efficiency and quality of bean under drought stress conditions.	Demir H, Kaman H, Saka AK, Ucan U, Kotan R, Akgun IH.	BMC Plant Biol	10.1186/s12870-025-07339-3	2025
	Pathogen Identification, Antagonistic Microbe Screening, and Biocontrol Strategies for Aconitum carmichaelii Root Rot.	Dai X, He Y, Su Y, Mo H, Li W, Li W, Zi S, Liu L, Di Y.	Microorganisms	10.3390/microorganisms13092202	2025
	Enzymatic modification of cotton fibre polysaccharides as an enabler of sustainable laundry detergents.	Yau HCL, Byard J, Thompson LE, Malekpour AK, Robson T, Bakshani CR, Lelanaite I, Willats WGT, Lant NJ.	Sci Rep	10.1038/s41598-024-73128-x	2024
	Characterization of Paenibacillus polymixa N179 as a robust and multifunctional biocontrol agent	Fallahzadeh-Mamaghani V, Golchin S, Shirzad A, Mohammadi H, Mohamadivand F.	Biol Control	10.1016/j.biocontrol.2020.104505	2022
Metabolism	Glutamine synthetase and GlnR regulate nitrogen metabolism in Paenibacillus polymyxa WLY78.	Zhao X, Song Y, Wang T, Hua C, Hu R, Shang Y, Shi H, Chen S.	Appl Environ Microbiol	10.1128/aem.00139-23	2023
	Characterization of a novel antifungal protein produced by Paenibacillus polymyxa isolated from the wheat rhizosphere	Ran J, Jiao L, Zhao R, Zhu M, Shi J, Xu B, Pan L.	Journal of the Science of Food and Agriculture.		2021
Pathogenicity	Effects of Enzamin, a Microbial Product, on Alterations of Intestinal Microbiota Induced by a High-Fat Diet.	Yasuzawa T, Nishi R, Ishitani S, Matsuo O, Ueshima S.	Nutrients	10.3390/nu14224743	2022
	Protein engineering of transaminase facilitating enzyme cascade reaction for the biosynthesis of azasugars.	Zhu Y, Chen P, Dong Q, Li Q, Liu D, Liu T, Liu W, Sun Y.	iScience	10.1016/j.isci.2024.109034	2024
	Comparative study of endophytic bacterial strains from non-host crops for enhancing plant growth and managing early blight in tomato.	Kukreti A, Siddabasappa CB, Krishnareddy PM, Devanna P, Basavapatna Subbanna Y, Channappa M, Reddy NK, Hashem A, Alsayed MF, Abd Allah EF.	Front Microbiol	10.3389/fmicb.2024.1487653	2024
	Bacillus and Paenibacillus as plant growth-promoting bacteria in soybean and cannabis.	Tariq H, Subramanian S, Geitmann A, Smith DL.	Front Plant Sci	10.3389/fpls.2025.1529859	2025
	Possible biocontrol of bacterial blight in pomegranate using native endophytic Bacillus spp. under field conditions.	Manjunatha N, Pokhare SS, Agarrwal R, Singh NV, Sharma J, Harsur MM, Marathe RA.	Front Microbiol	10.3389/fmicb.2024.1491124	2024
	Production of 2,3-Butanediol from non-detoxified wheat straw hydrolysate: Impact of microbial inhibitors on Paenibacillus polymyxa DSM 365	Okonkwo CC, Ujor V, Ezeji TC.	Industrial crops and products.	10.1016/j.indcrop.2020.113047	2021
	Characterization of active lead molecules from Lissocarinus orbicularis with potential antimicrobial resistance inhibition properties.	Harikrishnan S, Parivallal M, S Alsalhi M, Sudarshan S, Jayaraman N, Devanesan S, Rajasekar A, Jayalakshmi S.	J Infect Public Health	10.1016/j.jiph.2021.10.003	2021
Enzymology	Characterization of a novel antifungal protein produced by Paenibacillus polymyxa isolated from the wheat rhizosphere.	Ran J, Jiao L, Zhao R, Zhu M, Shi J, Xu B, Pan L.	J Sci Food Agric	10.1002/jsfa.10805	2021
	Elucidation of factors contributing to onset of Cercospora leaf blight during later reproductive development of soybean	Zivanovic M, Ward B, Price PP, Chen Z.	Plant Pathol		2021
Enzymology	Metagenomic analyses, isolation and characterization of endophytic bacteria associated with Eucalyptus urophylla BRS07-01 in vitro plants.	de Franca Bettencourt GM, Degenhardt J, Dos Santos GD, Vicente VA, Soccol CR.	World J Microbiol Biotechnol	10.1007/s11274-021-03127-x	2021
	Exploring the impact of plant growth-promoting bacteria in alleviating stress on Aptenia cordifolia subjected to irrigation with recycled water in multifunctional external green walls.	Jozay M, Zarei H, Khorasaninejad S, Miri T.	BMC Plant Biol	10.1186/s12870-024-05511-9	2024
	Nitrogen-Fixing Paenibacillus haidiansis and Paenibacillus sanfengchensis: Two Novel Species from Plant Rhizospheres.	Zhang W, Gao M, Hu R, Shang Y, Liu M, Lan P, Jiao S, Wei G, Chen S.	Microorganisms	10.3390/microorganisms12122561	2024
	Genome-wide mapping of GlnR-binding sites reveals the global regulatory role of GlnR in controlling the metabolism of nitrogen and carbon in Paenibacillus polymyxa WLY78.	Wang T, Zhao X, Wu X, Chen S.	BMC Genomics	10.1186/s12864-023-09147-1	2023
	Identification and verification of rhizosphere indicator microorganisms in tobacco root rot	Yao X, Huang K, Zhao S, Cheng Q, Zhang S, Yang L, Ding W, Zhang Y.	Agron J	10.1002/agj2.20547	2021
	Effects of a co-bacterial agent on the growth, disease control, and quality of ginseng based on rhizosphere microbial diversity.	Li X, Liu Q, Gao Y, Zang P, Zheng T.	BMC Plant Biol	10.1186/s12870-024-05347-3	2024
	Metagenomics and volatile metabolomics reveal microbial succession and flavor formation mechanisms during fermentation of Novel Pasture-style Laozao.	Miao Y, Sun M, Huo R, Chen Y, Xie J, Dong T, Zhang M.	Food Chem X	10.1016/j.fochx.2025.102598	2025
	Evaluation of the Antifungal and Biochemical Activities of Fungicides and Biological Agents against Ginseng Sclerotinia Root Rot Caused by Sclerotinia nivalis.	Feng S, Wang C, Xu Z, Dou B, Wang X, Yang L, Lu B, Gao J.	Microorganisms	10.3390/microorganisms12091761	2024
Genetics	Comparative genome analysis and mining of secondary metabolites of Paenibacillus polymyxa.	Wang B, Cheng H, Qian W, Zhao W, Liang C, Liu C, Cui G, Liu H, Zhang L.	Genes Genet Syst	10.1266/ggs.19-00053	2020
	Biocontrol Potential of a Mango-Derived Weissella paramesenteroides and Its Application in Managing Strawberry Postharvest Disease.	Zhang X, An B.	J Fungi (Basel)	10.3390/jof11070538	2025
Metabolism	Engineering of the 2,3-butanediol pathway of Paenibacillus polymyxa DSM 365.	Schilling C, Ciccone R, Sieber V, Schmid J.	Metab Eng	10.1016/j.ymben.2020.07.009	2020
	Occurrence and enumeration of rope-producing spore forming bacteria in flour and their spoilage potential in different bread formulations	Pereira APM, Stradiotto GC, Freire L, Alvarenga VO, Crucello A, Morassi LLP, Silva FP, Sant'Ana AS.	Lebensm Wiss Technol		2021
	Endophytic Paenibacillus polymyxa LMG27872 inhibits Meloidogyne incognita parasitism, promoting tomato growth through a dose-dependent effect.	Singh RR, Wesemael WML.	Front Plant Sci	10.3389/fpls.2022.961085	2022
Metabolism	MsmR1, a global transcription factor, regulates polymyxin synthesis and carbohydrate metabolism in Paenibacillus polymyxa SC2.	Zhao D, Li H, Cui Y, Tang S, Wang C, Du B, Ding Y.	Front Microbiol	10.3389/fmicb.2022.1039806	2022
	Exploring the agronomic traits, antioxidant and antifungal properties of Hermetia illucens frass extract in durum wheat (Triticum durum Desf.)	Vitti A, Coviello L, Falabella P, Mang S, Scieuzo C, Iannielli F, Ronga D, Nuzzaci M.	BMC Plant Biol		2025
	Biocontrol activity and action mechanism of Paenibacillus polymyxa strain Nl4 against pear Valsa canker caused by Valsa pyri.	Yuan H, Yuan M, Shi B, Wang Z, Huang T, Qin G, Hou H, Wang L, Tu H.	Front Microbiol	10.3389/fmicb.2022.950742	2022
Genetics	Pan-genome analysis of Paenibacillus polymyxa strains reveals the mechanism of plant growth promotion and biocontrol.	Zhou L, Zhang T, Tang S, Fu X, Yu S.	Antonie Van Leeuwenhoek	10.1007/s10482-020-01461-y	2020
Metabolism	Novel Prokaryotic CRISPR-Cas12a-Based Tool for Programmable Transcriptional Activation and Repression.	Schilling C, Koffas MAG, Sieber V, Schmid J.	ACS Synth Biol	10.1021/acssynbio.0c00424	2020
	Co-occurrence network analysis unveils the actual differential impact on the olive root microbiota by two Verticillium wilt biocontrol rhizobacteria.	Cardoni M, Fernandez-Gonzalez AJ, Valverde-Corredor A, Fernandez-Lopez M, Mercado-Blanco J.	Environ Microbiome	10.1186/s40793-023-00480-2	2023
	Polymyxin-induced neuromuscular weakness: a case report.	Chin AXY, Ng KWP, Chan YC, Goh Y, Rathakrishnan R.	Front Neurol	10.3389/fneur.2024.1342419	2024
Genetics	Metagenome analysis of Citrus sinensis rhizosphere infected with Candidatus liberibacter asiaticus reveals distinct structure in bacterial communities.	Arjmand E, Moghadam A, Afsharifar A, Faghihi MM, Izadpanah K, Taghavi SM.	Sci Rep	10.1038/s41598-025-21973-9	2025
Metabolism	Paenibacillus polymyxa biofertilizer application in a tea plantation reduces soil N₂O by changing denitrifier communities.	Zhou S, Zeng X, Xu Z, Bai Z, Xu S, Jiang C, Zhuang G, Xu S.	Can J Microbiol	10.1139/cjm-2019-0511	2020
Enzymology	Control of the polymyxin analog ratio by domain swapping in the nonribosomal peptide synthetase of Paenibacillus polymyxa.	Yuan Y, Xu QM, Yu SC, Sun HZ, Cheng JS, Yuan YJ.	J Ind Microbiol Biotechnol	10.1007/s10295-020-02275-7	2020
	Harnessing bacterial strain from rhizosphere to develop indigenous PGPR consortium for enhancing lobia (Vigna unguiculata) production.	Verma JP, Jaiswal DK, Gaurav AK, Mukherjee A, Krishna R, Prudencio de Araujo Pereira A.	Heliyon	10.1016/j.heliyon.2023.e13804	2023
	Microbial adaptation to spaceflight is correlated with bacteriophage-encoded functions.	Irby I, Broddrick JT.	Nat Commun	10.1038/s41467-023-42104-w	2024
	Phenazine 1-carboxylic acid Producing Seed Harbored Endophytic Bacteria from Cultivated Rice Variety of Kerala and Its Broad Range Antagonism to Diverse Plant Pathogens.	Radhakrishnan NA, Ravi A, Joseph BJ, Jose A, Jithesh O, Krishnankutty RE.	Probiotics Antimicrob Proteins	10.1007/s12602-021-09844-x	2023
Enzymology	Protective and Curative Activities of Paenibacillus polymyxa against Zucchini yellow mosaic virus Infestation in Squash Plants.	Abdelkhalek A, Al-Askar AA, Elbeaino T, Moawad H, El-Gendi H.	Biology (Basel)	10.3390/biology11081150	2022
	Forest Type, Bark Wounding, and Tapping: Their Combined Influence on Bacteria Biota of Styrax Paralleloneurus in Natural and Community Forest.	Susilowati A, Christita M, Larekeng SH, Lateef AA, Ren W, Azeez AA, Simarmata R, Khairina Y, Khumairah FH, Elfiati D, Asiegbu FO.	Environ Microbiol Rep	10.1111/1758-2229.70184	2025
	Pea-cucumber crop rotation suppresses Fusarium pathogens by reshaping soil microbial communities and enhancing nutrient availability.	Xu J, Yao Y, Pan L, Zhang N, Li D, Chen X.	Front Microbiol	10.3389/fmicb.2025.1697343	2025
Genetics	Control of Maize Sheath Blight and Elicit Induced Systemic Resistance Using Paenibacillus polymyxa Strain SF05.	Chen B, Han H, Hou J, Bao F, Tan H, Lou X, Wang G, Zhao F.	Microorganisms	10.3390/microorganisms10071318	2022
	Superiority of native seed core microbiomes in the suppression of bacterial wilt disease.	Dong Y, Gong J, Yang L, Jiang Q, Wen C, Zhang J, Yang R, Wang Y, Dai Y, Gao G, Li S, Cao Y, Ding W.	Front Microbiol	10.3389/fmicb.2024.1506059	2024
	Allelopathic Trade-Offs of Rye and Wheat Residues Versus 2-Benzoxazolinone: Impacts on Cotton Growth.	Li Y, Allen VG, Chen J, Wester DB.	Biology (Basel)	10.3390/biology14101321	2025
	Transcriptional landscape of Atractylodes chinensis contracting root rot.	Li Y, Liu Y, Zhang T, Ma S, Wang Y, Qiao C, Cao Y, Zhao C.	BMC Plant Biol	10.1186/s12870-025-07196-0	2025
	Assembly of nitrogenase biosynthetic pathway in Saccharomyces cerevisiae by using polyprotein strategy.	Wang M, Shang Y, Liu X, Chen S.	Front Microbiol	10.3389/fmicb.2023.1137355	2023
Metabolism	Effects of amino acids on the fermentation of inulin or glucose to produce R,R-2,3-butanediol using Paenibacillus polymyxa ZJ-9.	Gao J, Jiang RF, Cao C, Ni H, Zhang L, Deng LN, Xu H, Jiang RY.	Lett Appl Microbiol	10.1111/lam.13234	2019
	Optimization of curdlan production and ultrasound assisted extraction processes from Priestia megaterium.	Aquinas N, Ramananda BM, Selvaraj S.	Sci Rep	10.1038/s41598-024-77880-y	2024
	Suppression of Pepper Root Rot and Wilt Diseases Caused by Rhizoctonia solani and Fusarium oxysporum.	El-Kazzaz MK, Ghoneim KE, Agha MKM, Helmy A, Behiry SI, Abdelkhalek A, Saleem MH, Al-Askar AA, Arishi AA, Elsharkawy MM.	Life (Basel)	10.3390/life12040587	2022
Pathogenicity	Transfer of Nitrogen Fixation (nif) Genes to Non-diazotrophic Hosts.	Li Q, Chen S.	Chembiochem	10.1002/cbic.201900784	2020
	Polymyxin B₁ and E₂ From Paenibacillus polymyxa Y-1 for Controlling Rice Bacterial Disease.	Yi W, Chen C, Gan X.	Front Cell Infect Microbiol	10.3389/fcimb.2022.866357	2022
	Application Potential of Bacterial Volatile Organic Compounds in the Control of Root-Knot Nematodes.	Diyapoglu A, Oner M, Meng M.	Molecules	10.3390/molecules27144355	2022
	Biosynthetic Gene Clusters in Sequenced Genomes of Four Contrasting Rhizobacteria in Phytopathogen Inhibition and Interaction with Capsicum annuum Roots.	De la Cruz-Rodriguez Y, Adrian-Lopez J, Martinez-Lopez J, Neri-Marquez BI, Garcia-Pineda E, Alvarado-Gutierrez A, Fraire-Velazquez S.	Microbiol Spectr	10.1128/spectrum.03072-22	2023
Pathogenicity	Characterization of toxin systems of Paenibacillus strains isolated from honeybees.	Pannullo A, Muturi EJ, Dunlap CA.	Sci Rep	10.1038/s41598-025-12956-x	2025
	Probiotic Paenibacillus polymyxa 10 and Lactobacillus plantarum 16 enhance growth performance of broilers by improving the intestinal health.	Wang B, Gong L, Zhou Y, Tang L, Zeng Z, Wang Q, Zou P, Yu D, Li W.	Anim Nutr	10.1016/j.aninu.2021.03.008	2021
	Draft genome sequence data of Paenibacillus Polymyxa strain TH2H2, isolated from a tomato flower in Korea.	Cho G, Kim DR, Jeon CW, Kwak YS.	Data Brief	10.1016/j.dib.2020.105824	2020
	Prevalence of Deltaproteobacterial sequences in nifH gene pools associated with the rhizosphere of native switchgrass from Tall Grass Prairie (Oklahoma, USA).	Bahulikar RA.	3 Biotech	10.1007/s13205-023-03640-w	2023
	Light stress elicits soilborne disease suppression mediated by root-secreted flavonoids in Panax notoginseng.	Fang H, Guo C, Mei X, Hao M, Zhang J, Luo L, Liu H, Liu Y, Huang H, He X, Zhu Y, Yang M, Zhu S.	Hortic Res	10.1093/hr/uhae213	2024
	Use of beneficial bacterial endophytes: A practical strategy to achieve sustainable agriculture.	Medison RG, Tan L, Medison MB, Chiwina KE.	AIMS Microbiol	10.3934/microbiol.2022040	2022
	Exploring the effects of resveratrol and beta-hydroxy-beta-methylbutyric acid under different protein levels on the ileal health of tibetan sheep.	Gao W, Zhu K, Zhang X, Saren G, Zhang Y, Gan J, Hou S, Gui L.	Front Microbiol	10.3389/fmicb.2025.1612170	2025
	Native mixed microbe inoculants (M1H) optimize soil health to promote Cajanus cajan growth: the soil fungi are more sensitive than bacteria.	Liu Z, Luo C, Zheng K, Sun Y, Ru J, Ma Y, Zhang X, Zhou Y, Zhuang J.	Front Microbiol	10.3389/fmicb.2025.1521064	2025
	Quick In Vitro Screening of PGPMs for Salt Tolerance and Evaluation of Induced Tolerance to Saline Stress in Tomato Culture.	Arminjon L, Lefort F.	Microorganisms	10.3390/microorganisms13020246	2025
	Supplementing broiler diets with bacterial selenium nanoparticles enhancing performance, carcass traits, blood indices, antioxidant status, and caecal microbiota of Eimeria tenella-infected broiler chickens.	Alsulami MN, El-Saadony MT.	Poult Sci	10.1016/j.psj.2023.103111	2023
Enzymology	The inoculation with Pseudomonas simiae WCS417 strain promotes growth and the induction of iron-deficiency responses in cucumber plants (Cucumis sativus L.).	Aparicio MA, Ruiz-Castilla FJ, Ramos J, Romera FJ, Lucena C.	Planta	10.1007/s00425-025-04844-5	2025
	Draft Genome Sequences of Pantoea agglomerans, Paenibacillus polymyxa, and Pseudomonas sp. Strains, Seed Biogel-Associated Endophytes of Cucumis sativus L. (Cucumber) and Cucumis melo L. (Cantaloupe).	Khalaf EM, Raizada MN.	Microbiol Resour Announc	10.1128/mra.00667-20	2020
	In silico identification and characterization of antineoplastic asparaginase enzyme from endophytic bacteria.	Zadeh Hosseingholi E, Neghabi N, Molavi G, Gheibi Hayat SM, Shahriarpour H.	IUBMB Life	10.1002/iub.2237	2020
	Detection assay of polymyxin resistance coding mcr-1 gene based on CRISPR/Cas13a system.	Song Y, Hu Q, Han Y, Liu H, Huang Z, Niu M, Dong X, Yan K, Jin L, Li H, Sun Y.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1553681	2025
	Carrot Discard as a Promising Feedstock to Produce 2,3-Butanediol by Fermentation with P. polymyxa DSM 365.	Lopez-Linares JC, Mateo Martinez A, Coca M, Lucas S, Garcia-Cubero MT.	Bioengineering (Basel)	10.3390/bioengineering10080937	2023
	Geographically Disperse, Culturable Seed-Associated Microbiota in Forage Plants of Alfalfa (Medicago sativa L.) and Pitch Clover (Bituminaria bituminosa L.): Characterization of Beneficial Inherited Strains as Plant Stress-Tolerance Enhancers.	Niza-Costa M, Rodriguez-Dos Santos AS, Rebelo-Romao I, Ferrer MV, Sequero Lopez C, Vilchez JI.	Biology (Basel)	10.3390/biology11121838	2022
	Synergistic Antibacterial Activity of Amorolfine Combined with Colistin Against Acinetobacter baumannii.	Lin T, Liu S, Chen X, Gao F, Liu L, Chen D, Yin Y.	Int J Mol Sci	10.3390/ijms26073312	2025
Genetics	Microbiota Involved in the Degradation of Tremella fuciformis Polysaccharide and Microbial Enzymatic Potential Revealed by Microbiome and Metagenome.	Song X, Chen G, Zheng L, Shen J, Xue C, Chang Y.	Microorganisms	10.3390/microorganisms13020263	2025
Enzymology	Electrochemical detection of food-spoiling bacteria using interdigitated platinum microelectrodes.	Fysun O, Schmitt A, Auernhammer PT, Rauschnabel J, Langowski HC.	J Microbiol Methods	10.1016/j.mimet.2019.04.015	2019
	Active Metabolites From the Endophyte Paenibacillus polymyxa Y-1 of Dendrobium nobile for the Control of Rice Bacterial Diseases.	Yi W, Chen C, Gan X.	Front Chem	10.3389/fchem.2022.879724	2022
Genetics	Structure classification of the proteins from Salmonella enterica pangenome revealed novel potential pathogenicity islands.	Medvedev KE, Zhang J, Schaeffer RD, Kinch LN, Cong Q, Grishin NV.	Sci Rep	10.1038/s41598-024-60991-x	2024
	Inhibition of RNase to Attenuate Fungal-Manipulated Rhizosphere Microbiome and Diseases.	Yang B, Yang S, Wang X, Zhang Y, Zhao Y, Tao M, Zhu J, Zhang W, Wang Y, Duan K, Wang Y, Ye W, Guo Z, Wang Y.	Adv Sci (Weinh)	10.1002/advs.202503146	2025
Genetics	Exploring the Nature of the Antimicrobial Metabolites Produced by Paenibacillus ehimensis Soil Isolate MZ921932 Using a Metagenomic Nanopore Sequencing Coupled with LC-Mass Analysis.	Eltokhy MA, Saad BT, Eltayeb WN, Yahia IS, Aboshanab KM, Ashour MSE.	Antibiotics (Basel)	10.3390/antibiotics11010012	2021
	Potential mode of action of multispecies inoculums on wheat growth under water stress.	Agoussar A, Tremblay J, Yergeau E.	ISME Commun	10.1093/ismeco/ycaf095	2025
	Novel levan/bentonite/essential oil films: characterization and antimicrobial activity.	Kosarsoy Agceli G, Hammamchi H, Cihangir N.	J Food Sci Technol	10.1007/s13197-021-05009-4	2022
Metabolism	Identification of a native promoter P_LH-77 for gene expression in Paenibacillus polymyxa.	Li H, Ding Y, Zhao J, Ge R, Qiu B, Yang X, Yao L, Liu K, Wang C, Du B.	J Biotechnol	10.1016/j.jbiotec.2019.02.002	2019
	Inhibit the intrinsic bacteria from konjac glucomannan hydrosol for its improved viscosity stability	Hu L, Zhu X, Shang L, Teng Y, Li J, Li B.	Food hydrocolloids.		2020
Metabolism	Study on the simultaneous degradation of five pesticides by Paenibacillus polymyxa from Panax ginseng and the characteristics of their products.	Zhang X, Gao Y, Zang P, Zhao Y, He Z, Zhu H, Song S, Zhang L.	Ecotoxicol Environ Saf	10.1016/j.ecoenv.2018.10.093	2019
	Cannabis Seedlings Inherit Seed-Borne Bioactive and Anti-Fungal Endophytic Bacilli.	Dumigan CR, Deyholos MK.	Plants (Basel)	10.3390/plants11162127	2022
	Genomic annotation and validation of bacterial consortium NDMC-1 for enhanced degradation of sugarcane bagasse	Bohra V, Dafale NA, Hathi Z, Purohit HJ.	Ann Microbiol		2019
Metabolism	Occurrence of phenotypic variation in Paenibacillus polymyxa E681 associated with sporulation and carbohydrate metabolism.	Lee Y, Balaraju K, Kim SY, Jeon Y.	Biotechnol Rep (Amst)	10.1016/j.btre.2022.e00719	2022
Genetics	Genomic mechanisms of plant growth-promoting bacteria in the production of leguminous crops.	Adedayo AA, Babalola OO.	Front Genet	10.3389/fgene.2023.1276003	2023
	Maximizing Recovery of Paenibacillin, a Bacterially Produced Lantibiotic, Using Continuous Foam Separation from Bioreactors.	Campbell EP, Kasler DR, Yousef AE.	Foods	10.3390/foods11152290	2022
	Identification and characterization of a novel glucomannanase from Paenibacillus polymyxa.	Li K, Jiang C, Tan H, Li J, Xu Y, Tang D, Zhao X, Liu Q, Li J, Yin H.	3 Biotech	10.1007/s13205-021-02676-0	2021
	Evaluation of Paenibacillus polymyxa carboxymethylcellulose/poly (vinyl alcohol) formulation for control of Carya cathayensis canker caused by Botryosphaeria dothidea	Xu S, Yao J, Wu F, Mei L, Wang Y.	For Pathol	10.1111/efp.12464	2018
Genetics	Genetic and Nutritional Dynamics of SynCom in Suppressing Apple Fire Blight	Lee Y, Ko Y, Kwak Y.	Plant Pathol J		2025
	Biocontrol potential of Paenibacillus polymyxa against Verticillium dahliae infecting cotton plants	Zhang F, Li XL, Zhu SJ, Ojaghian MR, Zhang JZ.	Biol Control	10.1016/j.biocontrol.2018.08.021	2018
	Production optimization, purification, expression, and characterization of a novel alpha-l-arabinofuranosidase from Paenibacillus polymyxa	Gao J, Zhao Y, Zhang G, Li Y, Li Q.	Electron J Biotechnol	10.1016/j.ejbt.2018.09.002	2018
	Bioactive Nitrosylated and Nitrated N-(2-hydroxyphenyl)acetamides and Derived Oligomers: An Alternative Pathway to 2-Amidophenol-Derived Phytotoxic Metabolites.	Girel S, Schutz V, Bigler L, Dormann P, Schulz M.	Molecules	10.3390/molecules27154786	2022
Pathogenicity	The Selective Inhibitory Activity of a Fusaricidin Derivative on a Bloom-Forming Cyanobacterium, Microcystis sp.	Ko SR, Lee YK, Srivastava A, Park SH, Ahn CY, Oh HM.	J Microbiol Biotechnol	10.4014/jmb.1804.04031	2019
Metabolism	Two different restriction-modification systems for degrading exogenous DNA in Paenibacillus polymyxa.	Shen M, Chen Z, Mao X, Wang L, Liang J, Huo Q, Yin X, Qiu J, Sun D.	Biochem Biophys Res Commun	10.1016/j.bbrc.2018.09.016	2018
	Biofilm and dairy fouling detection in flexible tubing using low-field NMR	Fysun O, Anzmann T, Gschwind P, Rauschnabel J, Kohlus R, Langowski HC.	Eur Food Res Technol	10.1007/s00217-019-03371-4	2019
	Production of Different Biochemicals by Paenibacillus polymyxa DSM 742 From Pretreated Brewers' Spent Grains.	Didak Ljubas B, Novak M, Trontel A, Rajkovic A, Kelemen Z, Mardetko N, Grubisic M, Pavlecic M, Tominac VP, Santek B.	Front Microbiol	10.3389/fmicb.2022.812457	2022
	Soil warming increases the active antibiotic resistome in the gut of invasive giant African snails.	Zhang Y, Li HZ, Breed M, Tang Z, Cui L, Zhu YG, Sun X.	Microbiome	10.1186/s40168-025-02044-7	2025
	Fusaricidins, Polymyxins and Volatiles Produced by Paenibacillus polymyxa Strains DSM 32871 and M1.	Mulner P, Schwarz E, Dietel K, Herfort S, Jahne J, Lasch P, Cernava T, Berg G, Vater J.	Pathogens	10.3390/pathogens10111485	2021
	Molecular characterization of endophytic and ectophytic plant growth promoting bacteria isolated from tomato plants (Solanum lycopersicum L.) grown in different soil types.	Helal DS, El-Khawas H, Elsayed TR.	J Genet Eng Biotechnol	10.1186/s43141-022-00361-0	2022
	Evaluation of promoter sequences for the secretory production of a Clostridium thermocellum cellulase in Paenibacillus polymyxa.	Heinze S, Zimmermann K, Ludwig C, Heinzlmeir S, Schwarz WH, Zverlov VV, Liebl W, Kornberger P.	Appl Microbiol Biotechnol	10.1007/s00253-018-9369-7	2018
	Structural basis of the inhibition of GH1 beta-glucosidases by multivalent pyrrolidine iminosugars.	Martinez-Bailen M, Jimenez-Ortega E, Carmona AT, Robina I, Sanz-Aparicio J, Talens-Perales D, Polaina J, Matassini C, Cardona F, Moreno-Vargas AJ.	Bioorg Chem	10.1016/j.bioorg.2019.103026	2019
	A bibliometric analysis of biopesticides in corn pest management: Current trends and future prospects.	Krismawati A, Yustisia Y, Arifin Z, Purbiati T, Rachmawati D, Latifah E, Putra NR, Irianto I, Qomariyah L.	Heliyon	10.1016/j.heliyon.2024.e40196	2024
Phylogeny	Epiphytic Bacteria from Sweet Pepper Antagonistic In Vitro to Ralstonia solanacearum BD 261, a Causative Agent of Bacterial Wilt.	Mamphogoro TP, Kamutando CN, Maboko MM, Aiyegoro OA, Babalola OO.	Microorganisms	10.3390/microorganisms9091947	2021
	Effects of Paenibacillus polymyxa inoculation on below-ground nematode communities and plant growth	Finch EA, Caruso T, Engl C.	Soil Biol Biochem	10.1016/j.soilbio.2018.01.026	2018
Metabolism	Isolation and identification of cellulolytic bacteria from gastrointestinal tract of Arabian horse and investigation of their effect on the nutritional value of wheat straw.	Shakarami MH, Mohammadabadi T, Motamedi H, Sari M, Teimouri Yansari A.	J Appl Microbiol	10.1111/jam.14251	2019
	Auxin-producing bacteria promote barley rhizosheath formation.	Xu F, Liao H, Yang J, Zhang Y, Yu P, Cao Y, Fang J, Chen S, Li L, Sun L, Du C, Wang K, Dang X, Feng Z, Cao Y, Li Y, Zhang J, Xu W.	Nat Commun	10.1038/s41467-023-40916-4	2023
Enzymology	Production of R,R-2,3-butanediol of ultra-high optical purity from Paenibacillus polymyxa ZJ-9 using homologous recombination.	Zhang L, Cao C, Jiang R, Xu H, Xue F, Huang W, Ni H, Gao J.	Bioresour Technol	10.1016/j.biortech.2018.04.036	2018
Biotechnology	Bioprotective Strategies to Control Listeria monocytogenes in Food Products and Processing Environments.	Fliss O, Fliss I, Biron E.	Int J Mol Sci	10.3390/ijms262110481	2025
	An endophytic strain of genus Paenibacillus isolated from the fruits of Noni (Morinda citrifolia L.) has antagonistic activity against a Noni's pathogenic strain of genus Aspergillus.	Liu Y, Bai F, Li T, Yan H.	Microb Pathog	10.1016/j.micpath.2018.09.018	2018
Genetics	Genome Mining of the Lipopeptide Biosynthesis of Paenibacillus polymyxa E681 in Combination with Mass Spectrometry: Discovery of the Lipoheptapeptide Paenilipoheptin.	Vater J, Herfort S, Doellinger J, Weydmann M, Borriss R, Lasch P.	Chembiochem	10.1002/cbic.201700615	2018
	Growth-Promoting Characteristics of Fungal and Bacterial Endophytes Isolated from a Drought-Tolerant Mint Species Endostemon obtusifolius (E. Mey. ex Benth.) N. E. Br.	Ogbe AA, Gupta S, Stirk WA, Finnie JF, Van Staden J.	Plants (Basel)	10.3390/plants12030638	2023
	Erratum to Cytotoxic Effects and Production of Cytokines Induced by the Endophytic Paenibacillus polymyxa RNC-D In Vitro.	Debora M. Neris, Genoveva L.F. Luna, Joice M. de Almeida Rodolpho,Ana C. Urbaczek, Ricardo de Oliveira Correia, Karina A. Feitosa, Nadja F.G. Serrano, Cristina P. de Sousa andFernanda de Freitas Anibal.	Curr Pharm Biotechnol	10.2174/138920101914190111105915	2018
Enzymology	Bacterial polysaccharides inhibit sucrose-induced hyperglycemia in silkworms.	Ishii M, Matsumoto Y, Sekimizu K.	Drug Discov Ther	10.5582/ddt.2018.01040	2018
	Insights in the Complex DegU, DegS, and Spo0A Regulation System of Paenibacillus polymyxa by CRISPR-Cas9-Based Targeted Point Mutations.	Meliawati M, May T, Eckerlin J, Heinrich D, Herold A, Schmid J.	Appl Environ Microbiol	10.1128/aem.00164-22	2022
Pathogenicity	Paenibacillus polymyxa Associated with the Stingless Bee Melipona scutellaris Produces Antimicrobial Compounds against Entomopathogens.	Menegatti C, Da Paixao Melo WG, Carrao DB, De Oliveira ARM, Do Nascimento FS, Lopes NP, Pupo MT.	J Chem Ecol	10.1007/s10886-018-1028-z	2018
	Dissection of Paenibacillus polymyxa NSY50-Induced Defense in Cucumber Roots against Fusarium oxysporum f. sp. cucumerinum by Target Metabolite Profiling.	Du N, Yang Q, Guo H, Xue L, Fu R, Dong X, Dong H, Guo Z, Zhang T, Piao F, Shen S.	Biology (Basel)	10.3390/biology11071028	2022
	Influence of pH on Inulin Conversion to 2,3-Butanediol by Bacillus licheniformis 24: A Gene Expression Assay.	Tsigoriyna L, Arsov A, Gergov E, Petrova P, Petrov K.	Int J Mol Sci	10.3390/ijms241814065	2023
	A thermostable glycosyltransferase from Paenibacillus polymyxa NJPI29: recombinant expression, characterization, and application in synthesis of glycosides.	Chang S, Pan X, Zhao M, Li G, Wang X, Fan Y, Song W, Li B, Zhang S, He X.	3 Biotech	10.1007/s13205-021-02855-z	2021
	Detection of P. polymyxa biofilm, dairy biofouling and CIP-cleaning agents using low-field NMR	Fysun O, Anzmann T, Kleesattel A, Gschwind P, Rauschnabel J, Kohlus R, Langowski HC.	Eur Food Res Technol	10.1007/s00217-019-03288-y	2019
	In Vitro Modulator Effect of Total Extract from the Endophytic Paenibacillus polymyxa RNC-D in Leishmania (Leishmania) amazonensis and Macrophages.	Neris DM, Ortolani LG, de Castro CA, Correia RO, Rodolpho JMA, Camillo L, Nogueira CT, de Sousa CP, Anibal FF, Anibal FF.	Int J Microbiol	10.1155/2020/8895308	2020
Pathogenicity	Bacillus licheniformis Alleviates Clostridium perfringens-Induced Intestinal Injury in Mice Model by Modulating Inflammation, Apoptosis, and Cecal Microbial-Metabolic Responses.	Zhong Y, Zhang M, Xu H, Yu X, Hu Y, Xu Y, Xiao X, Yang C.	Animals (Basel)	10.3390/ani15101409	2025
Enzymology	Characterization of the PLP-dependent transaminase initiating azasugar biosynthesis.	Arciola JM, Horenstein NA.	Biochem J	10.1042/bcj20180340	2018
	Colistin: Lights and Shadows of an Older Antibiotic.	Diani E, Bianco G, Gatti M, Gibellini D, Gaibani P.	Molecules	10.3390/molecules29132969	2024
	Identifying bacterial and fungal communities associated with Fusarium-wilt symptomatic and non-symptomatic 'Gros Michel' banana plants in Ecuador.	Paredes Salgado EM, Guevara FE, Muentes C, Flores FJ, Magdama F.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1572860	2025
	Isolation and Screening of the Novel Multi-Trait Strains for Future Implications in Phytotechnology	Batykova Z, Pidlisnyuk V, Kistaubayeva A, Ust'ak S, Savitskaya I, Saidullayeva L, Mamirova A.	Microorganisms		2025
	Data on the ultrastructural characteristics of Paenibacillus polymyxa isolates and biocontrol efficacy of P. polymyxa ShX301.	Zhang F, Li XL, Zhu SJ, Ojaghian MR, Zhang JZ.	Data Brief	10.1016/j.dib.2018.09.058	2018
Pathogenicity	Antibacterial activity and probiotic characterization of autochthonous Paenibacillus polymyxa isolated from Anabas testudineus (Bloch, 1792).	Midhun SJ, Neethu S, Vysakh A, Arun D, Radhakrishnan EK, Jyothis M.	Microb Pathog	10.1016/j.micpath.2017.11.019	2017
	Microbial Enhancement of Plant Tolerance to Waterlogging: Mechanisms and Interplay with Biological Control of Pathogens	Maciag T, Krzyzanowska D.	Int J Mol Sci		2025
Proteome	A Rapid and Simple HPLC-MS/MS Method for the Quantitative Determination of Colistin for Therapeutic Drug Monitoring in Clinical Practice.	Zhang N, Xu Y, Liang B, Zeng J, Wang R, Cai Y.	Drug Des Devel Ther	10.2147/dddt.s479329	2024
	Compound of Lactobacillus reuteri and Candida rugosa supplementation alleviates intestinal barrier lesion via improving the gut microbiota in broilers infected with Salmonella Typhimurium.	Yang X, Fang H, Hu D, Chen P, Pan L, Wang K, Ni Y.	Poult Sci	10.1016/j.psj.2025.105417	2025
	Binding interactions of hydrophobically-modified flavonols with beta-glucosidase: fluorescence spectroscopy and molecular modelling study.	Chepeleva LV, Demidov OO, Snizhko AD, Tarasenko DO, Chumak AY, Kolomoitsev OO, Kotliar VM, Gladkov ES, Kyrychenko A, Roshal AD.	RSC Adv	10.1039/d3ra06276g	2023
	Exo-metabolome profiling of soybean endophytes: a road map of antagonism against Fusarium oxysporum.	Tariq H, Viau C, Subramanian S, Geitmann A, Smith DL.	mSystems	10.1128/msystems.00927-25	2025
	Protective Effects of Lactobacillus plantarum 16 and Paenibacillus polymyxa 10 Against Clostridium perfringens Infection in Broilers.	Gong L, Wang B, Zhou Y, Tang L, Zeng Z, Zhang H, Li W.	Front Immunol	10.3389/fimmu.2020.628374	2020
Pathogenicity	The toxic mode of action of cyclic lipodepsipeptide fusaricidins, produced by Paenibacillus polymyxa, toward mammalian cells.	Mikkola R, Andersson MA, Grigoriev P, Heinonen M, Salkinoja-Salonen MS.	J Appl Microbiol	10.1111/jam.13498	2017
	Analysis of Amyloid Fibrillation of Two Family 1 Glycoside Hydrolases.	Rodriguez-Lopez MA, Coll-Marques JM, Talens-Perales D, Marin-Navarro J, Polaina J, Vazquez-Contreras E.	Int J Mol Sci	10.3390/ijms25158536	2024
	Bacteriota and Antibiotic Resistance in Spiders.	Kacaniova M, Terentjeva M, Kowalczewski PL, Babosova M, Porhajasova JI, Hikal WM, Fedoriak M.	Insects	10.3390/insects13080680	2022
	Genomic Analysis of Endophytic Bacillus-Related Strains Isolated from the Medicinal Plant Origanum vulgare L. Revealed the Presence of Metabolic Pathways Involved in the Biosynthesis of Bioactive Compounds.	Semenzato G, Alonso-Vasquez T, Del Duca S, Vassallo A, Riccardi C, Zaccaroni M, Mucci N, Padula A, Emiliani G, Palumbo Piccionello A, Puglia AM, Fani R.	Microorganisms	10.3390/microorganisms10050919	2022
Genetics	Genome Insights into Beneficial Microbial Strains Composing SIMBA Microbial Consortia Applied as Biofertilizers for Maize, Wheat and Tomato.	Cangioli L, Tabacchioni S, Visca A, Fiore A, Aprea G, Ambrosino P, Ercole E, Sorensen S, Mengoni A, Bevivino A.	Microorganisms	10.3390/microorganisms12122562	2024
	In-vitro anti-inflammatory and antagonistic efficacy of polymyxin B capped silver nanoparticles in multi drug resistant Acinetobacter baumannii.	Siddiqui F, Zahra N, Amjad MF, Zeshan B, Alam R, Jaffar HM, Aziz T, Alshehri F, Al-Asmari F, Al-Joufi FA, Alwethaynani MS, Baothman BK.	Sci Rep	10.1038/s41598-025-01639-2	2025
	Novel gut bacteria species Paenibacillus ilasis with phosphorus degrading and soluble starch hydrolysis abilities isolated from fresh feces of rhinoceros.	Li X, Zuo S, Li M, Li Q, Su L.	Sci Rep	10.1038/s41598-025-06760-w	2025
	Identification of Genes Involved in Fe-S Cluster Biosynthesis of Nitrogenase in Paenibacillus polymyxa WLY78.	Li Q, Li Y, Li X, Chen S.	Int J Mol Sci	10.3390/ijms22073771	2021
Genetics	Whole genome-sequence analysis of Bacillus subtilis strain KC14-1 with broad-spectrum antifungal activity.	Li X, Chen Y, Yang S, Zhou Y, Yang C.	BMC Genomics	10.1186/s12864-025-11227-3	2025
	Functional Analysis and Genome Mining Reveal High Potential of Biocontrol and Plant Growth Promotion in Nodule-Inhabiting Bacteria Within Paenibacillus polymyxa Complex.	Ali MA, Lou Y, Hafeez R, Li X, Hossain A, Xie T, Lin L, Li B, Yin Y, Yan J, An Q.	Front Microbiol	10.3389/fmicb.2020.618601	2020
	Role of Cel5H protein surface amino acids in binding with clay minerals and measurements of its forces.	Math RK, Bharatham N, Javaregowda PK, Yun HD.	Appl Microsc	10.1186/s42649-021-00066-7	2021
Genetics	Cytosine Base Editor-Mediated Multiplex Genome Editing to Accelerate Discovery of Novel Antibiotics in Bacillus subtilis and Paenibacillus polymyxa.	Kim MS, Kim HR, Jeong DE, Choi SK.	Front Microbiol	10.3389/fmicb.2021.691839	2021
	Seasonal succession of endophyte and the association with active ingredients in Rheum palmatum.	Li N, Mao Y, Huang Y, Zhang L, Hou L, Liu X, Du Y, Chen D, Sun K.	Microbiol Spectr	10.1128/spectrum.01184-24	2024
Pathogenicity	Optimization of Protective Agents for The Freeze-Drying of Paenibacillus polymyxa Kp10 as a Potential Biofungicide.	Nasran HS, Mohd Yusof H, Halim M, Abdul Rahman N.	Molecules	10.3390/molecules25112618	2020
Metabolism	Combined Assembly and Targeted Integration of Multigene for Nitrogenase Biosynthetic Pathway in Saccharomyces cerevisiae.	Liu X, Wang M, Song Y, Li Y, Liu P, Shi H, Li Y, Hao T, Zhang H, Jiang W, Chen S, Li J.	ACS Synth Biol	10.1021/acssynbio.9b00060	2019
Metabolism	The ability of spore formers to degrade milk proteins, fat, phospholipids, common stabilizers, and exopolysaccharides.	Mehta DS, Metzger LE, Hassan AN, Nelson BK, Patel HA.	J Dairy Sci	10.3168/jds.2019-16623	2019
	Evaluation of Tunisian wheat endophytes as plant growth promoting bacteria and biological control agents against Fusarium culmorum.	Saadaoui M, Faize M, Rifai A, Tayeb K, Omri Ben Youssef N, Kharrat M, Roeckel-Drevet P, Chaar H, Venisse JS.	PLoS One	10.1371/journal.pone.0300791	2024
Metabolism	Plant-growth-promoting Bacillus and Paenibacillus species improve the nutritional status of Triticum aestivum L.	Hussain A, Ahmad M, Nafees M, Iqbal Z, Luqman M, Jamil M, Maqsood A, Mora-Poblete F, Ahmar S, Chen JT, Alyemeni MN, Ahmad P.	PLoS One	10.1371/journal.pone.0241130	2020
	Advances in Extraction Protocols, Degradation Methods, and Bioactivities of Proanthocyanidins.	Liang L, Liu Y, Wu L, Weng L, Qiu H, Zhong W, Meng F.	Molecules	10.3390/molecules29102179	2024
	A comprehensive analysis of human gut microbial biosynthesis gene clusters unveiling the dominant role of Paenibacillus.	Gao H, Zhuang D, Zhou H, Su Q, Hu X, Wang Y, Bao W, Zhu L.	mSystems	10.1128/msystems.00610-25	2025
Enzymology	Characterization of Bacillus megaterium, Bacillus pumilus, and Paenibacillus polymyxa isolated from a Pinot noir wine from Western Washington State.	von Cosmos NH, Watson BA, Fellman JK, Mattinson DS, Edwards CG.	Food Microbiol	10.1016/j.fm.2017.05.003	2017
	Zinc-solubilizing bacterial consortia: a promising approach for zinc biofortification of crops.	Upadhayay VK, Gangola S, Taj G, Gaurav K, Rani A, Kumar S, Garg S, Gupta G, Ali H, Siddiqui S, Alamri SAM, Alamri SAM, Mittal A, Alrumman SA, Pandey M.	Front Microbiol	10.3389/fmicb.2025.1575514	2025
	Production of a Recombinant Fibrinolytic Protease from an Isolate of Serratia marcescens from the Amazon Basin	Souza T, Schwarz M, Rezende Correa P, Melo M, Mota A, Fernandes O, Mendonca-Lima L, Degrave W.	ACS Omega
	Isolation and Biological Control of Colletotrichum sp. Causing Anthracnosis in Theobroma cacao L. in Chiapas, Mexico.	Rodriguez-Velazquez ND, Gomez-de la Cruz I, Lopez-Guillen G, Chavez-Ramirez B, Estrada-de Los Santos P.	J Fungi (Basel)	10.3390/jof11040312	2025
	Fusaricidins from Paenibacillus polymyxa M-1, a family of lipohexapeptides of unusual complexity-a mass spectrometric study.	Vater J, Herfort S, Doellinger J, Weydmann M, Dietel K, Faetke S, Lasch P.	J Mass Spectrom	10.1002/jms.3891	2017
Phylogeny	Isolation of a potential biocontrol agent Paenibacillus polymyxa NSY50 from vinegar waste compost and its induction of host defense responses against Fusarium wilt of cucumber.	Du N, Shi L, Yuan Y, Sun J, Shu S, Guo S.	Microbiol Res	10.1016/j.micres.2017.04.013	2017
	Alteration in the Morphological and Transcriptomic Profiles of Acinetobacter baumannii after Exposure to Colistin.	Yoon EJ, Mo JW, Kim JW, Jeong MC, Yoo JS.	Microorganisms	10.3390/microorganisms12081644	2024
	Global Variation in Escherichia coli mcr-1 Genes and Plasmids from Animal and Human Genomes Following Colistin Usage Restrictions in Livestock.	Garcias B, Flores MA, Fernandez M, Monteith W, Pascoe B, Sheppard SK, Martin M, Cortey M, Darwich L.	Antibiotics (Basel)	10.3390/antibiotics13080759	2024
	Microbiological Quality Assessment of Some Commercially Available Breads.	Gyorgy E, Laslo E.	Foods	10.3390/foods13203271	2024
	Growth, Health, Quality, and Production of Onions (Allium cepa L.) Inoculated with Systemic Biological Products.	Gutierrez-Benicio GM, Aguirre-Mancilla CL, Arreola-Tostado JM, Aguado-Santacruz GA.	Microorganisms	10.3390/microorganisms13040797	2025
Metabolism	Characterization of the Polymyxin D Synthetase Biosynthetic Cluster and Product Profile of Paenibacillus polymyxa ATCC 10401.	Galea CA, Han M, Zhu Y, Roberts K, Wang J, Thompson PE, L J, Velkov T.	J Nat Prod	10.1021/acs.jnatprod.6b00807	2017
	Inhibitory proteins of Bacillus subtilis interact within the membrane to block intramembrane protease activity.	Mandal S, Soriano A, Erpelding C, Ruffner J, Smith E, Orlando BJ, Kroos L.	J Bacteriol	10.1128/jb.00186-25	2025
	A Seed Endophytic Bacterium Cronobacter dublinensis BC-14 Enhances the Growth and Drought Tolerance of Echinochloa crus-galli.	Cheng S, Wang Q, Yang D, He Q, Deng J, Zhou Y, Zhang L, Jiang J.	Microorganisms	10.3390/microorganisms12122544	2024
	Transcriptome analysis of two near-isogenic lines of bell pepper (Capsicum annuum) infected with bell pepper endornavirus and pepper mild mottle virus.	Escalante C, Sela N, Valverde RA.	Front Genet	10.3389/fgene.2023.1182578	2023
	Implications of Below-Ground Allelopathic Interactions of Camelina sativa and Microorganisms for Phosphate Availability and Habitat Maintenance.	Hofmann D, Thiele B, Siebers M, Rahmati M, Schutz V, Jeong S, Cui J, Bigler L, Held F, Wu B, Babic N, Kovacic F, Hamacher J, Holzl G, Dormann P, Schulz M.	Plants (Basel)	10.3390/plants12152815	2023
	Microbiological characterization for a new wild strain of Paenibacillus polymyxa with antifungal activity against Botrytis cinerea	Santiago R, Huilinir C, Cottet L, Castillo A.	Biol Control	10.1016/j.biocontrol.2016.10.002	2016
	Concurrence of spores of Clostridium tyrobutyricum, Clostridium beijerinckii and Paenibacillus polymyxa in silage, dairy cow faeces and raw milk	Driehuis F, Hoolwerf J, Rademaker JLW.	Int Dairy J	10.1016/j.idairyj.2016.08.004	2016
Metabolism	Research on the Solid State Fermentation of Jerusalem Artichoke Pomace for Producing R,R-2,3-Butanediol by Paenibacillus polymyxa ZJ-9.	Cao C, Zhang L, Gao J, Xu H, Xue F, Huang W, Li Y.	Appl Biochem Biotechnol	10.1007/s12010-016-2354-7	2017
	Optimizing plant growth, nutrient uptake, and yield of onion through the application of phosphorus solubilizing bacteria and endophytic fungi.	Arunachalam T, Gade K, Mahadule PA, Soumia PS, Govindasamy V, Gawande SJ, Mahajan V.	Front Microbiol	10.3389/fmicb.2024.1442912	2024
	Non-native PGPB consortium consisting of Pseudomonas sp. G31 and Azotobacter sp. PBC2 promoted winter wheat growth and slightly altered the native bacterial community.	Dobrzynski J, Kulkova I, Jakubowska Z, Wrobel B.	Sci Rep	10.1038/s41598-025-86820-3	2025
	A review on the potential use of eubiotics in non-chicken poultry species.	Mnisi CM, Njeri FM, Maina AN, Waliaula PK, Cheng V, Kumalo I, Egbu CF, Kiarie EG.	Trop Anim Health Prod	10.1007/s11250-025-04466-9	2025
	AmiP from hyperthermophilic Thermus parvatiensis prophage is a thermoactive and ultrathermostable peptidoglycan lytic amidase.	Jasilionis A, Plotka M, Wang L, Dorawa S, Lange J, Watzlawick H, van den Bergh T, Vroling B, Altenbuchner J, Kaczorowska AK, Pohl E, Kaczorowski T, Nordberg Karlsson E, Freitag-Pohl S.	Protein Sci	10.1002/pro.4585	2023
Metabolism	The Serine Biosynthesis of Paenibacillus polymyxa WLY78 Is Regulated by the T-Box Riboswitch.	Zhang H, Li Q, Li Y, Chen S.	Int J Mol Sci	10.3390/ijms22063033	2021
Metabolism	Investigation of relationship between 2,3-butanediol toxicity and production during growth of Paenibacillus polymyxa.	Okonkwo CC, Ujor V, Ezeji TC.	N Biotechnol	10.1016/j.nbt.2016.10.006	2017
	Utilizing Microbial Inoculants to Alleviate Continuous Cropping Obstacles: Insights into the Metabolites and Transcriptomic Responses of Pinellia ternata.	Wang X, Alami MM, Gong S, Cheng Q, Chen C, Li X, Zhong S, He Z, Chen D, Feng S, Chen S, Shu S.	Metabolites	10.3390/metabo15030189	2025
Genetics	Comparative and Functional Analyses of Two Sequenced Paenibacillus polymyxa Genomes Provides Insights Into Their Potential Genes Related to Plant Growth-Promoting Features and Biocontrol Mechanisms.	Li JY, Gao TT, Wang Q.	Front Genet	10.3389/fgene.2020.564939	2020
	Isolation and characterization of antagonistic Paenibacillus polymyxa HX-140 and its biocontrol potential against Fusarium wilt of cucumber seedlings.	Zhai Y, Zhu JX, Tan TM, Xu JP, Shen AR, Yang XB, Li JL, Zeng LB, Wei L.	BMC Microbiol	10.1186/s12866-021-02131-3	2021
	Isolation and growth-promoting mechanisms of phosphate-solubilizing bacteria from Qinghai-Tibet Plateau in Lespedeza bicolor Turcz.	Zhang X, Liu W, Liu J, Mei X, Zhang J, Wang D, Zhang X, Zhuang J.	Front Microbiol	10.3389/fmicb.2025.1669774	2025
	Plant growth promotion via priming with volatile organic compounds emitted from Bacillus vallismortis strain EXTN-1.	Dutta S, Balaraju K, Oh SY, Lee MH, Lee SW, Lee YH, Park K.	Front Microbiol	10.3389/fmicb.2024.1524888	2024
	Metagenomic analysis reveals Bacillus cereus OTU8977 as a potential probiotic in promoting walnut growth.	Wang C, Song W, Li C, Cao Y, Li X, Zhao J, Yang F, Yu H, Liang Q, Yang KQ, Liu JN, Fang H.	BMC Plant Biol	10.1186/s12870-025-06812-3	2025
Metabolism	Transcriptomic and Hormonal Changes in Wheat Roots Enhance Growth under Moderate Soil Drying.	Li Y, Jiang S, Hong Y, Yao Z, Chen Y, Zhu M, Ding J, Li C, Zhu X, Xu W, Guo W, Zhu N, Zhang J.	Int J Mol Sci	10.3390/ijms25179157	2024
	Colistin-degrading proteases confer collective resistance to microbial communities during polymicrobial infections.	Lee DH, Cha JH, Kim DW, Lee K, Kim YS, Oh HY, Cho YH, Cha CJ.	Microbiome	10.1186/s40168-022-01315-x	2022
Metabolism	Magnesium aminoclay-based transformation of Paenibacillus riograndensis and Paenibacillus polymyxa and development of tools for gene expression.	Brito LF, Irla M, Walter T, Wendisch VF.	Appl Microbiol Biotechnol	10.1007/s00253-016-7999-1	2017
	Whole genome analysis of endophytic strain PM1 reveals promising plant Growth-Promoting mechanisms in pomegranate.	Patel P, Patel F, Joshi C, Joshi M.	J Genet Eng Biotechnol	10.1016/j.jgeb.2025.100486	2025
Enzymology	Immobilization of alginate C-5 epimerases using Bacillus subtilis spore display.	Spannenkrebs JB, Beenfeldt Petersen A, Aachmann FL, Kabisch J.	Appl Environ Microbiol	10.1128/aem.00298-25	2025
	Plasmid pPNptGreen Expression of Green Fluorescent Protein in Pseudomonas chlororaphis Strain S1Bt23 Abrogates Biocontrol Activity Against Pythium ultimum.	Akuma M, Chi SI, Xu R, Thapa I, Blackwell B, Tambong JT.	Environ Microbiol Rep	10.1111/1758-2229.70083	2025
	Unraveling the Intricacies of Powdery Mildew: Insights into Colonization, Plant Defense Mechanisms, and Future Strategies.	Gan CM, Tang T, Zhang ZY, Li M, Zhao XQ, Li SY, Yan YW, Chen MX, Zhou X.	Int J Mol Sci	10.3390/ijms26083513	2025
	Microbial diversity in soils suppressive to Fusarium diseases.	Todorovic I, Moenne-Loccoz Y, Raicevic V, Jovicic-Petrovic J, Muller D.	Front Plant Sci	10.3389/fpls.2023.1228749	2023
	Efficacy and safety of polymyxin B sulfate versus colistin sulfate in ICU patients with nosocomial pneumonia caused by carbapenem-resistant Acinetobacter baumannii: a multicenter, propensity score-matched, real-world cohort study.	Bu W, Wang C, Wu Y, Zhang P, Zhang N, Han Y, Xu X, Li S, Cai Y.	BMC Infect Dis	10.1186/s12879-025-10773-1	2025
Metabolism	A single amino acid mutation in Spo0A results in sporulation deficiency of Paenibacillus polymyxa SC2.	Hou X, Yu X, Du B, Liu K, Yao L, Zhang S, Selin C, Fernando WG, Wang C, Ding Y.	Res Microbiol	10.1016/j.resmic.2016.05.002	2016
	Biocontrol of fungal phytopathogens by Bacillus pumilus.	Dobrzynski J, Jakubowska Z, Kulkova I, Kowalczyk P, Kramkowski K.	Front Microbiol	10.3389/fmicb.2023.1194606	2023
Genetics	Identification, Genome Characterization, and Growth Optimization of Paenibacillus peoriae MHJL1 for Biocontrol and Growth Promotion of Cotton Seedlings.	Zheng T, Li M, Kong Z, Ji L, Fu X, Dai L, Kan J, Men Q, Wang H, Du B, Liu K, Mei X, Wang C.	Microorganisms	10.3390/microorganisms13020261	2025
	Identification and combinatorial engineering of indole-3-acetic acid synthetic pathways in Paenibacillus polymyxa.	Sun H, Zhang J, Liu W, E W, Wang X, Li H, Cui Y, Zhao D, Liu K, Du B, Ding Y, Wang C.	Biotechnol Biofuels Bioprod	10.1186/s13068-022-02181-3	2022
	Effect of four trace elements on Paenibacillus polymyxa Pp-7250 proliferation, activity and colonization in ginseng.	Gao Y, Liang J, Xiao R, Zang P, Zhao Y, Zhang L.	AMB Express	10.1186/s13568-018-0694-0	2018
	Effects of an EPS Biosynthesis Gene Cluster of Paenibacillus polymyxa WLY78 on Biofilm Formation and Nitrogen Fixation under Aerobic Conditions.	He X, Li Q, Wang N, Chen S.	Microorganisms	10.3390/microorganisms9020289	2021
	Identification of Volatile Organic Compounds Emitted by Two Beneficial Endophytic Pseudomonas Strains from Olive Roots.	Montes-Osuna N, Cernava T, Gomez-Lama Cabanas C, Berg G, Mercado-Blanco J.	Plants (Basel)	10.3390/plants11030318	2022
	Synergistic interactions of nanoparticles and plant growth promoting rhizobacteria enhancing soil-plant systems: a multigenerational perspective.	Verma KK, Joshi A, Song XP, Singh S, Kumari A, Arora J, Singh SK, Solanki MK, Seth CS, Li YR.	Front Plant Sci	10.3389/fpls.2024.1376214	2024
	Establishment and characterization of the first immortalized vocal cord leukoplakia epithelial cell line.	Fu ZM, Bao YY, Chen Z, Zhong JT, Chen HC, Cao ZZ, Zhou SH.	Cancer Gene Ther	10.1038/s41417-024-00859-4	2025
	Elevational microhabitats influence some endolichenic traits of Umbilicaria aprina, an alpine lichen species.	Rahimi-Rizi M, Norouzi H, Sohrabi M, Dashtipoor S, Omidi Nasab M, Boustie J.	Sci Rep	10.1038/s41598-025-03162-w	2025
	Draft Genome Sequence of Paenibacillus polymyxa KF-1, an Excellent Producer of Microbicides.	Li Y, Li Q, Li Y, Gao J, Fan X.	Genome Announc	10.1128/genomea.00727-16	2016
	Efficiency of Nannochloropsis oculata and Bacillus polymyxa symbiotic composite at ammonium and phosphate removal from synthetic wastewater.	Wang S, Liu J, Li C, Chung BM.	Environ Technol	10.1080/09593330.2018.1444103	2019
	Complete Genome Sequence of Paenibacillus polymyxa YC0573, a Plant Growth-Promoting Rhizobacterium with Antimicrobial Activity.	Liu H, Wang C, Li Y, Liu K, Hou Q, Xu W, Fan L, Zhao J, Gou J, Du B, Ding Y.	Genome Announc	10.1128/genomea.01636-16	2017
	Enhancing drought tolerance in Pisum sativum and Vicia faba through interspecific interactions with a mixed inoculum of Rhizobium laguerreae and non-host beneficial rhizobacteria.	Hami A, El Attar I, Mghazli N, Ennajeh S, Ait-Ouakrim EH, Bennis M, Oulghazi S, Badaoui B, Aurag J, Sbabou L, Taha K.	Front Plant Sci	10.3389/fpls.2025.1528923	2025
	Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications	Gallardo-Camarena M, Reverchon F, Mendez-Bravo A, Torres-Acosta M, Licona-Cassani C.	AMB Express		2025
	Relations Between Core Taxa and Metabolic Characteristics of Bacterial Communities in Litopenaeus vannamei Ponds and Their Probiotic Potential.	Zhao Q, Zhou K, Zhang F, Wang Y, Hao J, Xie F, Yang Q.	Microorganisms	10.3390/microorganisms13020466	2025
Genetics	Novel Plant-Associated Brevibacillus and Lysinibacillus Genomospecies Harbor a Rich Biosynthetic Potential of Antimicrobial Compounds.	Jahne J, Le Thi TT, Blumenscheit C, Schneider A, Pham TL, Le Thi PT, Blom J, Vater J, Schweder T, Lasch P, Borriss R.	Microorganisms	10.3390/microorganisms11010168	2023
	Metabolic engineering of Corynebacterium glutamicum for efficient production of optically pure (2R,3R)-2,3-butanediol.	Kou M, Cui Z, Fu J, Dai W, Wang Z, Chen T.	Microb Cell Fact	10.1186/s12934-022-01875-5	2022
	Mitigation of Copper Stress in Maize by Inoculation with Paenibacillus polymyxa and Bacillus circulans.	Abdel Latef AAH, Zaid A, Abo-Baker AA, Salem W, Abu Alhmad MF.	Plants (Basel)	10.3390/plants9111513	2020
	Complete Genome Sequence of Paenibacillus polymyxa YC0136, a Plant Growth-Promoting Rhizobacterium Isolated from Tobacco Rhizosphere.	Liu H, Liu K, Li Y, Wang C, Hou Q, Xu W, Fan L, Zhao J, Gou J, Du B, Ding Y.	Genome Announc	10.1128/genomea.01635-16	2017
	Isolation and Characterization of Plant Growth-Promoting Endophytic Bacteria Paenibacillus polymyxa SK1 from Lilium lancifolium.	Khan MS, Gao J, Chen X, Zhang M, Yang F, Du Y, Moe TS, Munir I, Xue J, Zhang X.	Biomed Res Int	10.1155/2020/8650957	2020
Metabolism	Paenibacillus polymyxa BFKC01 enhances plant iron absorption via improved root systems and activated iron acquisition mechanisms.	Zhou C, Guo J, Zhu L, Xiao X, Xie Y, Zhu J, Ma Z, Wang J.	Plant Physiol Biochem	10.1016/j.plaphy.2016.04.025	2016
	Noncytotoxic polymyxin derivatives enhance antibiotic action against multidrug-resistant Gram-negative bacteria.	Ramirez D, Ramirez DM, Arora R, Arthur G, Schweizer F.	Antimicrob Agents Chemother	10.1128/aac.00712-25	2025
	Effect of GFP tagging of Paenibacillus polymyxa P2b-2R on its ability to promote growth of canola and tomato seedlings	Padda KP, Puri A, Chanway CP.	Biol Fertil Soils	10.1007/s00374-015-1083-3	2016
	The impact of salinization on soil bacterial diversity, yield and quality of Glycyrrhiza uralensis Fisch.	Bao Y, Ma B, McLaughlin NB, Niu Y, Wang D, Liu H, Li M, Sun Z.	Front Microbiol	10.3389/fmicb.2024.1448301	2024
	Aqueous extract from urucum (Bixa orellana L.): antimicrobial, antioxidant, and healing activity.	Franklin VA, Bach Hi EM, Wadt NSY, Bach EE.	Porto Biomed J	10.1097/j.pbj.0000000000000183	2023
	Bacillus amyloliquefaciens promotes cluster root formation of white lupin under low phosphorus by mediating auxin levels.	Yang J, Li S, Zhou X, Du C, Fang J, Li X, Zhao J, Ding F, Wang Y, Zhang Q, Wang Z, Liu J, Dong G, Zhang J, Xu F, Xu W.	Plant Physiol	10.1093/plphys/kiae676	2025
	Rheological characterization of the exopolysaccharide Paenan in surfactant systems.	Rutering M, Schmid J, Gansbiller M, Braun A, Kleinen J, Schilling M, Sieber V.	Carbohydr Polym	10.1016/j.carbpol.2017.11.086	2018
	Heterologous Expression and Enzymatic Properties of beta-Glucuronidase from Clostridium perfringens and Its Application in Bilirubin Transformation.	Wu Q, Guo Q, Yang F, Li M, Zhu Y, Xu B, Zhao L, Zhang S, Xie Y, Li F, Wu X, Xu D.	Microorganisms	10.3390/microorganisms13051043	2025
	The Characterization of Lactic Acid Bacteria Strains as Components of a Biopreparation for Chickens for Slaughter.	Zamojska D, Rosicka-Kaczmarek J, Macierzynska-Piotrowska E, Nowak A.	Microorganisms	10.3390/microorganisms13020317	2025
	Functional and genomic analyses of plant growth promoting traits in Priestia aryabhattai and Paenibacillus sp. isolates from tomato rhizosphere.	Almiron C, Petitti TD, Ponso MA, Romero AM, Areco VA, Bianco MI, Espariz M, Yaryura PM.	Sci Rep	10.1038/s41598-025-87390-0	2025
	Structure predictions and functional insights into Amidase_3 domain containing N-acetylmuramyl-L-alanine amidases from Deinococcus indicus DR1.	Modi M, Thambiraja M, Cherukat A, Yennamalli RM, Priyadarshini R.	BMC Microbiol	10.1186/s12866-024-03225-4	2024
	Evidence of nitrogen fixation and growth promotion in canola (Brassica napus L.) by an endophytic diazotroph Paenibacillus polymyxa P2b-2R	Puri A, Padda KP, Chanway CP.	Biol Fertil Soils	10.1007/s00374-015-1051-y	2016
	Characterisation of Soil Bacterial Communities That Exhibit Chemotaxis to Root Exudates from Phosphorus-Limited Plants.	Weigh KV, Batista BD, Hoang H, Dennis PG.	Microorganisms	10.3390/microorganisms11122984	2023
Genetics	Genomic, functional, and metabolic enhancements in multidrug-resistant Enterobacter bugandensis facilitating its persistence and succession in the International Space Station.	Sengupta P, Muthamilselvi Sivabalan SK, Singh NK, Raman K, Venkateswaran K.	Microbiome	10.1186/s40168-024-01777-1	2024
Metabolism	Biosynthesis of paenibacillin, a lantibiotic with N-terminal acetylation, by Paenibacillus polymyxa.	Huang E, Yousef AE.	Microbiol Res	10.1016/j.micres.2015.08.001	2015
Metabolism	Production of D-tagatose and bioethanol from onion waste by an intergrating bioprocess.	Kim HM, Song Y, Wi SG, Bae HJ.	J Biotechnol	10.1016/j.jbiotec.2017.09.013	2017
Genetics	Genome-guided purification and characterization of polymyxin A1 from Paenibacillus thiaminolyticus SY20: A rarely explored member of polymyxins.	Wu YP, Liu DM, Liang MH, Huang YY, Lin J, Xiao LF.	Front Microbiol	10.3389/fmicb.2022.962507	2022
Metabolism	Proteomic analyses of the interaction between the plant-growth promoting rhizobacterium Paenibacillus polymyxa E681 and Arabidopsis thaliana.	Kwon YS, Lee DY, Rakwal R, Baek SB, Lee JH, Kwak YS, Seo JS, Chung WS, Bae DW, Kim SG.	Proteomics	10.1002/pmic.201500196	2016
	Characterization and Biocontrol Efficacy of Bacillus velezensis GYUN-1190 against Apple Bitter Rot.	Park H, Lee Y, Balaraju K, Kim J, Jeon Y.	Plant Pathol J	10.5423/ppj.oa.05.2024.0076	2024
	Ligilactobacillus agilis W70: a probiotic with capacity to enhance ammonia assimilation in the rumen.	Duan X, Vigors S, Ma R, Ma L, Gu J, Bu D.	Front Microbiol	10.3389/fmicb.2024.1498109	2024
Metabolism	[Breeding of high-producing LI-F lipopeptide Paenibacillus polymyxa by protoplast fusion and differential expression analysis of fusion strains].	Yan D, Han J, Bie X, Lu Z, Lu F, Zhao H, Zhang C.	Sheng Wu Gong Cheng Xue Bao		2015
	Compositional differences between gut microbiota of adult patients with asthma and healthy controls.	Hoffmann A, Strozik T, Wasiak T, Buczylko K, Pawliczak R.	Postepy Dermatol Alergol	10.5114/ada.2022.117998	2023
	Four Decades of Bacillus Biofertilizers: Advances and Future Prospects in Agriculture.	Wu X, Liu Y, Jia B, Tao L, Li H, Wang J, Yuan Z, Sun X, Yao Y.	Microorganisms	10.3390/microorganisms13010187	2025
Metabolism	The Role of Fnr Paralogs in Controlling Anaerobic Metabolism in the Diazotroph Paenibacillus polymyxa WLY78.	Shi H, Li Y, Hao T, Liu X, Zhao X, Chen S.	Appl Environ Microbiol	10.1128/aem.03012-19	2020
	l-2,3-Diaminopropionate Binding Mode of the SulM Adenylation Domain Limits Engineering Monobactam Analogue Biosynthesis with Larger Substrates.	Kahlert L, Patel KD, Lichstrahl MS, Li R, He C, Gulick AM, Townsend CA.	JACS Au	10.1021/jacsau.5c00231	2025
	Expression of Paenibacillus polymyxa beta-1,3-1,4-glucanase in Streptomyces lydicus A01 improves its biocontrol effect against Botrytis cinerea	Li J, Liu W, Luo L, Dong D, Liu T, Zhang T, Lu C, Liu D, Zhang D, Wu H.	Biol Control	10.1016/j.biocontrol.2015.06.008	2015
	Enhancing the Mechanical Properties and Water Permeability of Pervious Planting Concrete: A Study on Additives and Plant Growth.	He J, Xu S, Sang G, Wu Y, Liu S.	Materials (Basel)	10.3390/ma17102301	2024
	Rare occurrence of polymyxin B-induced hyperpigmentation in a child with ventriculitis.	Fitzrol DN, Ang SY, Suhaimi A, Yeap TB.	BMJ Case Rep	10.1136/bcr-2022-253959	2023
Genetics	Unveiling a New Antimicrobial Peptide with Efficacy against P. aeruginosa and K. pneumoniae from Mangrove-Derived Paenibacillus thiaminolyticus NNS5-6 and Genomic Analysis.	Sermkaew N, Atipairin A, Krobthong S, Aonbangkhen C, Yingchutrakul Y, Uchiyama J, Songnaka N.	Antibiotics (Basel)	10.3390/antibiotics13090846	2024
Phylogeny	Phylogenomic and molecular marker based studies to clarify the evolutionary relationships amongst Anoxybacillus species and demarcation of the family Anoxybacillaceae and some of its constituent genera.	Patel I, Bello S, Gupta RS.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006528	2024
	Interactional mechanisms of Paenibacillus polymyxa SC2 and pepper (Capsicum annuum L.) suggested by transcriptomics.	Liu H, Li Y, Ge K, Du B, Liu K, Wang C, Ding Y.	BMC Microbiol	10.1186/s12866-021-02132-2	2021
	Physicochemical and Rheological Properties of Degraded Konjac Gum by Abalone (Haliotis discus hannai) Viscera Enzyme.	Lin ZM, Wen JX, Lin DQ, Liu K, Chen YL, Miao S, Cao MJ, Sun LC.	Foods	10.3390/foods13132158	2024
Phylogeny	The Phylogenomic Characterization of Planotetraspora Species and Their Cellulases for Biotechnological Applications.	Bouras N, Bakli M, Dif G, Smaoui S, Smuleac L, Pascalau R, Menendez E, Nouioui I.	Genes (Basel)	10.3390/genes15091202	2024
	Inactivation of sacB Gene Allows Higher 2,3-Butanediol Production by Bacillus licheniformis from Inulin.	Gergov E, Petrova P, Arsov A, Ignatova I, Tsigoriyna L, Armenova N, Petrov K.	Int J Mol Sci	10.3390/ijms252211983	2024
Metabolism	Introduction of the exogenous NADH coenzyme regeneration system and its influence on intracellular metabolic flux of Paenibacillus polymyxa.	Zhang L, Xu Y, Gao J, Xu H, Cao C, Xue F, Ding G, Peng Y.	Bioresour Technol	10.1016/j.biortech.2015.11.067	2016
Pathogenicity	The antibacterial activity of LI-F type peptide against methicillin-resistant Staphylococcus aureus (MRSA) in vitro and inhibition of infections in murine scalded epidermis.	Han J, Ma Z, Gao P, Lu Z, Liu H, Gao L, Lu W, Ju X, Lv F, Zhao H, Bie X.	Appl Microbiol Biotechnol	10.1007/s00253-017-8669-7	2018
	Food Waste from Campus Dining Hall as a Potential Feedstock for 2,3-Butanediol Production via Non-Sterilized Fermentation.	Caldwell A, Su X, Jin Q, Hemphill P, Jaha D, Nard S, Tiriveedhi V, Huang H, OHair J.	Foods	10.3390/foods13030452	2024
	Molecular changes associated with spontaneous phenotypic variation of Paenibacillus polymyxa, a commonly used biocontrol agent, and temperature-dependent control of variation.	Lee Y, Kim YS, Balaraju K, Seo YS, Park J, Ryu CM, Park SH, Kim JF, Kang S, Jeon Y.	Sci Rep	10.1038/s41598-020-73716-7	2020
	Dynamics of Bacterial Communities by Apple Tissue: Implications for Apple Health.	Lee HJ, Kim SH, Kim DR, Cho G, Kwak YS.	J Microbiol Biotechnol	10.4014/jmb.2305.05003	2023
Pathogenicity	Sources of antibiotics: Hot springs.	Mahajan GB, Balachandran L.	Biochem Pharmacol	10.1016/j.bcp.2016.11.021	2017
Pathogenicity	Paenibacillus polymyxa biofilm polysaccharides antagonise Fusarium graminearum.	Timmusk S, Copolovici D, Copolovici L, Teder T, Nevo E, Behers L.	Sci Rep	10.1038/s41598-018-37718-w	2019
	The efficacy of polymyxin B in treating stroke-associated pneumonia with carbapenem-resistant Gram-negative bacteria infections: a multicenter real-world study using propensity score matching.	Zhuang HH, Chen QH, Wang W, Qu Q, Xu WX, Hu Q, Wu XL, Chen Y, Wan Q, Xu TT, Long WM, Luo Y, Zhang HN, Qu J.	Front Pharmacol	10.3389/fphar.2025.1413563	2025
	Bioprocess development of 2, 3-butanediol production using agro-industrial residues.	Hazeena SH, Shurpali NJ, Siljanen H, Lappalainen R, Anoop P, Adarsh VP, Sindhu R, Pandey A, Binod P.	Bioprocess Biosyst Eng	10.1007/s00449-022-02761-5	2022
	Antifungal characterizations of a novel endo-beta-1,6-glucanase from Flavobacterium sp. NAU1659.	Xie T, Shen J, Geng Z, Wu F, Dong Y, Cui Z, Liang Y, Ye X.	Appl Microbiol Biotechnol	10.1007/s00253-024-13269-1	2024
Metabolism	Enhanced Production of Polymyxin E in Paenibacillus polymyxa by Replacement of Glucose by Starch.	Yu Z, Sun Z, Yin J, Qiu J.	Biomed Res Int	10.1155/2018/1934309	2018
Metabolism	Streptomyces fungicidicus-derived secondary metabolites as an antiviral agent to alleviate zucchini yellow mosaic virus in squash.	Behiry S, Nabil R, Younes H, Heflish A, Philip B, Abdelkhalek A.	Sci Rep	10.1038/s41598-025-24821-y	2025
Enzymology	Enhancing N use Efficiency, Increasing Wheat Yield and Reducing Chemical Fertilizer Dependence via Beneficial Bacteria.	Shaaban M, Younas A, Mehmood MA, Shi Z, Wang X.	Rice (N Y)	10.1186/s12284-025-00849-6	2025
Enzymology	Isolation and characterization of Paenibacillus polymyxa LY214, a camptothecin-producing endophytic bacterium from Camptotheca acuminata.	Pu X, Chen F, Yang Y, Qu X, Zhang G, Luo Y.	J Ind Microbiol Biotechnol	10.1007/s10295-015-1643-4	2015
Metabolism	Comprehensive utilization of glycerol from sugarcane bagasse pretreatment to fermentation.	Jiang L, Zheng A, Zhao Z, He F, Li H.	Bioresour Technol	10.1016/j.biortech.2015.07.078	2015
	Characterization of a Thermostable Lichenase from Bacillus subtilis B110 and Its Effects on beta-Glucan Hydrolysis.	Huang Z, Ni G, Wang F, Zhao X, Chen Y, Zhang L, Qu M.	J Microbiol Biotechnol	10.4014/jmb.2111.11017	2022
	Development of a novel biological control agent targeting the phytopathogen Erwinia amylovora.	Dagher F, Olishevska S, Philion V, Zheng J, Deziel E.	Heliyon	10.1016/j.heliyon.2020.e05222	2020
	Probiotic bacteria inhibit the bovine respiratory pathogen Mannheimia haemolytica serotype 1 in vitro.	Amat S, Subramanian S, Timsit E, Alexander TW.	Lett Appl Microbiol	10.1111/lam.12723	2017
	Non-Catalytic Domains of Glycoside Hydrolase Family 5 from Paenibacillus curdlanolyticus are Important for Promoting Multifunctional Enzyme Activities and Degradation of Agricultural Residues.	Fatmawati NV, Singkhala A, Ketbot P, Baramee S, Waeonukul R, Tachaapaikoon C, Uke A, Kosugi A, Ratanakhanokchai K, Pason P.	J Microbiol Biotechnol	10.4014/jmb.2501.01046	2025
	Effect of sodium diacetate on fermentation, aerobic stability, and microbial diversity of alfalfa silage.	Esen S, Koc F, Isik R.	3 Biotech	10.1007/s13205-023-03853-z	2024
	Draft Genome Sequence of Paenibacillus polymyxa EBL06, a Plant Growth-Promoting Bacterium Isolated from Wheat Phyllosphere.	Liang S, Jin D, Wang X, Fan H, Bai Z.	Genome Announc	10.1128/genomea.00414-15	2015
	Functional investigation of Zur in metal ion homeostasis, motility and multiple stresses resistance in cyanobacteria Synechocystis sp. PCC 6803.	Jin H, Han X, Zheng C, Xu J, Zhang W, Gu Y, Peng Y, Han J, Xu L, Shen X, Yang Y.	Stress Biol	10.1007/s44154-025-00224-x	2025
	Outcome and safety of colistin usage in pediatric cancer patients with carbapenem-resistant enterobacteriaceae bacteremia at children cancer hospital Egypt.	Adel N, Khedr R, Elanany M, Zaki HF, Hafez H, El-Abhar H.	Ann Afr Med	10.4103/aam.aam_209_21	2023
Metabolism	Efficient production of (R,R)-2,3-butanediol from cellulosic hydrolysate using Paenibacillus polymyxa ICGEB2008.	Adlakha N, Yazdani SS.	J Ind Microbiol Biotechnol	10.1007/s10295-014-1542-0	2015
	The Prevention of Bio-Organic Fertilizer Fermented from Cow Manure Compost by Bacillus sp. XG-1 on Watermelon Continuous Cropping Barrier.	Zhang H, Hua ZW, Liang WZ, Niu QH, Wang X.	Int J Environ Res Public Health	10.3390/ijerph17165714	2020
Genetics	Genome analysis of colistin-resistant Salmonella isolates from human sources in Guizhou of southwestern China, 2019-2023.	Wu J, Wen Y, You L, Wei X, Wang J, Zhu G, Li S.	Front Microbiol	10.3389/fmicb.2025.1498995	2025
	Evaluation of three sample preparation methods for the identification of clinical strains by using two MALDI-TOF MS systems.	Wang J, Wang H, Cai K, Yu P, Liu Y, Zhao G, Chen R, Xu R, Yu M.	J Mass Spectrom	10.1002/jms.4696	2021
	Colistin exerts potent activity against mcr+ Enterobacteriaceae via synergistic interactions with the host defense.	Kumaraswamy M, Riestra AM, Flores A, Dahesh S, Askarian F, Uchiyama S, Monk J, Jung S, Bondsater G, Nilsson V, Chang M, Bulitta JB, Lang Y, Kousha A, Bjanes E, Chavarria N, Clark T, Seo H, Sakoulas G, Nizet V.	J Clin Invest	10.1172/jci170690	2025
	Construction of an efficient electroporation transformation system promotes the application of Targetron in wild-type Paenibacillus elgii 219.	Yang G, Li S, Ma Y, Peng S, Zeng X, Huang J, Deng A, Qiao S, Yu H.	Appl Environ Microbiol	10.1128/aem.02041-24	2025
	Reviews of taxonomy, epidemiology, and management practices of the barley scald (Rhynchosporium graminicola) disease.	Ababa G, Kesho A, Tadesse Y, Amare D.	Heliyon	10.1016/j.heliyon.2023.e14315	2023
Enzymology	Structure and Properties of Exopolysaccharide Produced by Gluconobacter frateurii and Its Potential Applications.	Ning Y, Cao H, Zhao S, Gao D, Zhao D.	Polymers (Basel)	10.3390/polym16071004	2024
Enzymology	Screening of a Novel Polysaccharide Lyase Family 10 Pectate Lyase from Paenibacillus polymyxa KF-1: Cloning, Expression and Characterization.	Zhao Y, Yuan Y, Zhang X, Li Y, Li Q, Zhou Y, Gao J.	Molecules	10.3390/molecules23112774	2018
	Application of Nuclear Magnetic Resonance to Detect Toxigenic Clostridium difficile from Stool Specimens: A Proof of Concept.	Yang P, Hash S, Park K, Wong C, Doraisamy L, Petterson J, Petti CA, Ward PM, Lee SH, Menon S, She RC.	J Mol Diagn	10.1016/j.jmoldx.2016.09.012	2017
	Identification and antagonistic activity of endophytic bacterial strain Paenibacillus sp. 5 L8 isolated from the seeds of maize (Zea mays L., Jingke 968)	Liu Y, Wang R, Cao Y, Chen C, Bai F, Xu T, Zhao R, Zhang X, Zhao J, Cheng C.	Ann Microbiol		2016
Metabolism	A Novel PL9 Pectate Lyase from Paenibacillus polymyxa KF-1: Cloning, Expression, and Its Application in Pectin Degradation.	Yuan Y, Zhang XY, Zhao Y, Zhang H, Zhou YF, Gao J.	Int J Mol Sci	10.3390/ijms20123060	2019
Metabolism	Inactivation of the phosphoglucomutase gene pgm in Paenibacillus polymyxa leads to overproduction of fusaricidin.	Kim HR, Park SY, Kim SB, Jeong H, Choi SK, Park SH.	J Ind Microbiol Biotechnol	10.1007/s10295-014-1470-z	2014
	Feeding differing direct-fed microbials and its influence on growth and haematological parameters of growing lambs.	Antwi C, Mensa PA, Arthur FKN, Frimpong YO, Baah J.	Transl Anim Sci	10.1093/tas/txz053	2019
Pathogenicity	Fusaricidin Produced by Paenibacillus polymyxa WLY78 Induces Systemic Resistance against Fusarium Wilt of Cucumber.	Li Y, Chen S.	Int J Mol Sci	10.3390/ijms20205240	2019
Biotechnology	Industrial Microbial Technologies for Feed Protein Production from Non-Protein Nitrogen.	Ye Y, Cai Y, Wang F, He Y, Yang Y, Guo Z, Liu M, Ren H, Wang S, Liu D, Xu J, Wang Z.	Microorganisms	10.3390/microorganisms13040742	2025
	Bacterial social interactions in synthetic Bacillus consortia enhance plant growth.	Liu Y, Jia B, Ren Y, Xun W, Stefanic P, Yang T, Miao Y, Zhang N, Yao Y, Zhang R, Xu Z, Shen Q, Mandic-Mulec I.	Imeta	10.1002/imt2.70053	2025
	Stress-relieving plant growth-promoting bacterial co-inoculation enhances nodulation and nitrogen uptake in black gram under nitrogen-free saline conditions.	Tiwari PK, Srivastava AK, Singh R, Srivastava AK.	Front Microbiol	10.3389/fmicb.2024.1516748	2024
	Bile Salt-Stimulated Lipase Activity in Donor Breast Milk Influenced by Pasteurization Techniques.	Koh J, Victor AF, Howell ML, Yeo JG, Qu Y, Selover B, Waite-Cusic J, Dallas DC.	Front Nutr	10.3389/fnut.2020.552362	2020
Metabolism	Extracellular endoglucanase activity from Paenibacillus polymyxa BEb-40: production, optimization and enzymatic characterization.	Gastelum-Arellanez A, Paredes-Lopez O, Olalde-Portugal V.	World J Microbiol Biotechnol	10.1007/s11274-014-1723-z	2014
Enzymology	Cloning and characterization of a cold-adapted endo-1,5-alpha-L-arabinanase from Paenibacillus polymyxa and rational design for acidic applicability.	Wang S, Yang Y, Yang R, Zhang J, Chen M, Matsukawa S, Xie J, Wei D.	J Agric Food Chem	10.1021/jf501328n	2014
	The Effects of Gluconacin on Bacterial Tomato Pathogens and Protection against Xanthomonas perforans, the Causal Agent of Bacterial Spot Disease.	Ramos ETA, Olivares FL, Rocha LOD, Silva RFD, Carmo MGFD, Lopes MTG, Meneses CHSG, Vidal MS, Baldani JI.	Plants (Basel)	10.3390/plants12183208	2023
	Synthesis and Degradation of the Phytohormone Indole-3-Acetic Acid by the Versatile Bacterium Paraburkholderia xenovorans LB400 and Its Growth Promotion of Nicotiana tabacum Plant.	Vega-Celedon P, Castillo-Novales D, Bravo G, Cardenas F, Romero-Silva MJ, Seeger M.	Plants (Basel)	10.3390/plants13243533	2024
Metabolism	Regulation of extracellular oxidoreduction potential enhanced (R,R)-2,3-butanediol production by Paenibacillus polymyxa CJX518.	Dai JJ, Cheng JS, Liang YQ, Jiang T, Yuan YJ.	Bioresour Technol	10.1016/j.biortech.2014.06.044	2014
Phylogeny	Production of antibacterial compounds using Bacillus spp. isolated from thermal springs in Saudi Arabia.	Alqahtani O, Stapleton P, Gibbons S.	Saudi Pharm J	10.1016/j.jsps.2023.05.015	2023
	Co-expression of nitrogenase proteins in cotton (Gossypium hirsutum L.).	Shang Y, Guo W, Liu X, Ma L, Liu D, Chen S.	PLoS One	10.1371/journal.pone.0290556	2023
	Egg-laying by female Aedes aegypti shapes the bacterial communities of breeding sites.	Mosquera KD, Martinez Villegas LE, Rocha Fernandes G, Rocha David M, Maciel-de-Freitas R, A Moreira L, Lorenzo MG.	BMC Biol	10.1186/s12915-023-01605-2	2023
	The Bio-Synthesis of Three Metal Oxide Nanoparticles (ZnO, MnO₂, and MgO) and Their Antibacterial Activity Against the Bacterial Leaf Blight Pathogen.	Ogunyemi SO, Zhang M, Abdallah Y, Ahmed T, Qiu W, Ali MA, Yan C, Yang Y, Chen J, Li B.	Front Microbiol	10.3389/fmicb.2020.588326	2020
	Mechanism study of the impact of Escherichia coli on coal flotation.	Li J, Wang X, Meng D, Xia L, Song S, Arauz Lara BJL.	PLoS One	10.1371/journal.pone.0272841	2022
Metabolism	Gene cloning, expression, and characterization of an exo-inulinase from Paenibacillus polymyxa ZJ-9.	Gao J, Xu YY, Yang HM, Xu H, Xue F, Li S, Feng XH.	Appl Biochem Biotechnol	10.1007/s12010-014-0950-y	2014
	Gene sdaB Is Involved in the Nematocidal Activity of Enterobacter ludwigii AA4 Against the Pine Wood Nematode Bursaphelenchus xylophilus.	Zhao Y, Yuan Z, Wang S, Wang H, Chao Y, Sederoff RR, Sederoff H, Yan H, Pan J, Peng M, Wu D, Borriss R, Niu B.	Front Microbiol	10.3389/fmicb.2022.870519	2022
	Root-Associated Bacteria Are Biocontrol Agents for Multiple Plant Pests.	Lee JH, Anderson AJ, Kim YC.	Microorganisms	10.3390/microorganisms10051053	2022
	Effect of Selected Factors Influencing Biogenic Amines Degradation by Bacillus subtilis Isolated from Food.	Butor I, Jancova P, Purevdorj K, Klementova L, Kluz M, Hunova I, Pistekova H, Bunka F, Bunkova L.	Microorganisms	10.3390/microorganisms11041091	2023
Metabolism	Promoter analysis and transcription regulation of fus gene cluster responsible for fusaricidin synthesis of Paenibacillus polymyxa SQR-21.	Li S, Zhang R, Wang Y, Zhang N, Shao J, Qiu M, Shen B, Yin X, Shen Q.	Appl Microbiol Biotechnol	10.1007/s00253-013-5157-6	2013
	Suppression of hesA mutation on nitrogenase activity in Paenibacillus polymyxa WLY78 with the addition of high levels of molybdate or cystine.	Liu X, Zhao X, Li X, Chen S.	PeerJ	10.7717/peerj.6294	2019
	Breast milk preservation: thermal and non-thermal processes and their effect on microorganism inactivation and the content of bioactive and nutritional compounds.	Nunez-Delgado A, Mizrachi-Chavez VM, Welti-Chanes J, Macher-Quintana ST, Chuck-Hernandez C.	Front Nutr	10.3389/fnut.2023.1325863	2023
	Inactivation of Escherichia coli O157:H7 on stainless steel upon exposure to Paenibacillus polymyxa biofilms.	Kim S, Bang J, Kim H, Beuchat LR, Ryu JH.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2013.10.004	2013
	Transcriptional alterations of peanut root during interaction with growth-promoting Tsukamurella tyrosinosolvens strain P9.	Bai X, Han Y, Han L.	PLoS One	10.1371/journal.pone.0298303	2024
	Effects of Grazing and Leaf Spot Disease on the Structure and Diversity of Phyllosphere Microbiome Communities in Leymus chinensis.	Qian Y, Jin Y, Han X, Malik K, Li C, Yu B.	Plants (Basel)	10.3390/plants13152128	2024
	Transcriptome Profiles Reveal the Growth-Promoting Mechanisms of Paenibacillus polymyxa YC0136 on Tobacco (Nicotiana tabacum L.).	Liu H, Wang J, Sun H, Han X, Peng Y, Liu J, Liu K, Ding Y, Wang C, Du B.	Front Microbiol	10.3389/fmicb.2020.584174	2020
Enzymology	A mixture of Lactobacillus casei, Lactobacillus lactis, and Paenibacillus polymyxa reduces Escherichia coli O157:H7 in finishing feedlot cattle.	Stanford K, Bach S, Baah J, McAllister T.	J Food Prot	10.4315/0362-028x.jfp-13-433	2014
	Genome analysis of Paenibacillus polymyxa A18 gives insights into the features associated with its adaptation to the termite gut environment.	Pasari N, Gupta M, Eqbal D, Yazdani SS.	Sci Rep	10.1038/s41598-019-42572-5	2019
	Inhibitory activity of Paenibacillus polymyxa on the biofilm formation of Cronobacter spp. on stainless steel surfaces.	Yang S, Kim S, Ryu JH, Kim H.	J Food Sci	10.1111/1750-3841.12168	2013
Enzymology	Components of rhizospheric bacterial communities of barley and their potential for plant growth promotion and biocontrol of Fusarium wilt of watermelon.	Yang W.	Braz J Microbiol	10.1007/s42770-019-00089-z	2019
	Auxin-Producing Pseudomonas Recruited by Root Flavonoids Increases Rice Rhizosheath Formation through the Bacterial Histidine Kinase Under Soil Drying.	Xu F, Wang Y, Yang J, Zhang X, Wang K, Ding F, Pang J, Tong L, Bai C, Chen S, Sun L, Du C, Fang J, Xu M, Li L, Yu X, Gengli J, Liu J, Zhang Q, Wang Z, Zhu Y, Zhang-Zheng H, Zhang J, Xu W.	Adv Sci (Weinh)	10.1002/advs.202500607	2025
	Improved rock phosphate dissolution from organic acids is driven by nitrate assimilation of bacteria isolated from nitrate and CaCO3-rich soil.	Garcia-Sanchez M, Bertrand I, Barakat A, Zeroual Y, Oukarroum A, Plassard C.	PLoS One	10.1371/journal.pone.0283437	2023
Pathogenicity	Green Synthesis of Silver Nanoparticles with Culture Supernatant of a Bacterium Pseudomonas rhodesiae and Their Antibacterial Activity against Soft Rot Pathogen Dickeya dadantii.	Hossain A, Hong X, Ibrahim E, Li B, Sun G, Meng Y, Wang Y, An Q.	Molecules	10.3390/molecules24122303	2019
	A molecular dynamics study of Beta-Glucosidase B upon small substrate binding.	Mazlan NS, Ahmad Khairudin NB.	J Biomol Struct Dyn	10.1080/07391102.2015.1081570	2016
	Comparative Transcriptome Analysis and Genetic Methods Revealed the Biocontrol Mechanism of Paenibacilluspolymyxa NSY50 against Tomato Fusarium Wilt.	Du N, Guo H, Fu R, Dong X, Xue D, Piao F.	Int J Mol Sci	10.3390/ijms231810907	2022
	Dietary Supplementation With Lactobacillus plantarum Ameliorates Compromise of Growth Performance by Modulating Short-Chain Fatty Acids and Intestinal Dysbiosis in Broilers Under Clostridium perfringens Challenge.	Wang B, Zhou Y, Mao Y, Gong L, Li X, Xu S, Wang F, Guo Q, Zhang H, Li W.	Front Nutr	10.3389/fnut.2021.706148	2021
	Can a diazotrophic endophyte originally isolated from lodgepole pine colonize an agricultural crop (corn) and promote its growth?	Puri A, Padda KP, Chanway CP.	Soil Biol Biochem	10.1016/j.soilbio.2015.07.012	2015
	Impact of Plant Growth-Promoting Microorganism (PGPM) Consortium on Biochemical Properties and Yields of Tomato Under Drought Stress.	Krishna R, Ansari WA, Altaf M, Jaiswal DK, Pandey S, Singh AK, Kumar S, Verma JP.	Life (Basel)	10.3390/life14101333	2024
	Research progress and hotspot analysis of rhizosphere microorganisms based on bibliometrics from 2012 to 2021.	Sun S, Xue R, Liu M, Wang L, Zhang W.	Front Microbiol	10.3389/fmicb.2023.1085387	2023
	Endophytic fungus Biscogniauxia petrensis produces antibacterial substances.	Han L, Zheng W, He Z, Qian S, Ma X, Kang J.	PeerJ	10.7717/peerj.15461	2023
	Bioinspired Adhesive and Antibacterial Microneedles for Versatile Transdermal Drug Delivery.	Zhang X, Chen G, Yu Y, Sun L, Zhao Y.	Research (Wash D C)	10.34133/2020/3672120	2020
	Colonization of Wheat, Maize and Cucumber by Paenibacillus polymyxa WLY78.	Hao T, Chen S.	PLoS One	10.1371/journal.pone.0169980	2017
Genetics	Genomic and phenotypic biology of a novel Dickeya zeae WH1 isolated from rice in China: Insights into pathogenicity and virulence factors.	Tan XJ, Zhang ZW, Xiao JJ, Wang W, He F, Gao X, Jiang B, Shen L, Wang X, Sun Y, Zhu GP.	Front Microbiol	10.3389/fmicb.2022.997486	2022
	Impact of artisanal refining activities on bacterial diversity in a Niger Delta fallow land.	Fenibo EO, Nkuna R, Matambo T.	Sci Rep	10.1038/s41598-024-53147-4	2024
	Required characteristics of Paenibacillus polymyxa JB-0501 as potential probiotic.	Naghmouchi K, Baah J, Cudennec B, Drider D.	Arch Microbiol	10.1007/s00203-013-0905-7	2013
Metabolism	Enhanced production of (R,R)-2,3-butanediol by metabolically engineered Klebsiella oxytoca.	Park JM, Rathnasingh C, Song H.	J Ind Microbiol Biotechnol	10.1007/s10295-015-1648-z	2015
	DJK-5, an anti-biofilm peptide, increases Staphylococcus aureus sensitivity to colistin killing in co-biofilms with Pseudomonas aeruginosa.	Wardell SJT, Yung DBY, Gupta A, Bostina M, Overhage J, Hancock REW, Pletzer D.	NPJ Biofilms Microbiomes	10.1038/s41522-024-00637-y	2025
Pathogenicity	Fusaricidin-Type Compounds Create Pores in Mitochondrial and Plasma Membranes of Mammalian Cells.	Mikkola R, Andersson M, Kharechkina E, Kruglova S, Kruglov A.	Biomolecules	10.3390/biom9090433	2019
Metabolism	Production of S-acetoin from diacetyl by Escherichia coli transformant cells that express the diacetyl reductase gene of Paenibacillus polymyxa ZJ-9.	Gao J, Xu YY, Li FW, Ding G.	Lett Appl Microbiol	10.1111/lam.12107	2013
Metabolism	N2-fixation and seedling growth promotion of lodgepole pine by endophytic Paenibacillus polymyxa.	Anand R, Grayston S, Chanway C.	Microb Ecol	10.1007/s00248-013-0196-1	2013
	Preparation of Polymyxin B-Functionalized Cryogels for Efficient Endotoxin Removal from Protein Solutions.	Liu P, Lin H, Wang J.	Gels	10.3390/gels11060402	2025
Metabolism	Production of autoinducer-2 by aerobic endospore-forming bacteria isolated from the West African fermented foods.	Qian Y, Kando CK, Thorsen L, Larsen N, Jespersen L.	FEMS Microbiol Lett	10.1093/femsle/fnv186	2015
	Transport of Phage in Melon Plants and Inhibition of Progression of Bacterial Fruit Blotch.	Rahimi-Midani A, Choi TJ.	Viruses	10.3390/v12040477	2020
Phylogeny	Isolation and identification of methanethiol-utilizing bacterium CZ05 and its application in bio-trickling filter of biogas.	Zhang CZ, Zhang WJ, Xu J.	Bioresour Technol	10.1016/j.biortech.2013.10.024	2013
	Recent Advances in the Development of Polymyxin Antibiotics: 2010-2023.	Slingerland CJ, Martin NI.	ACS Infect Dis	10.1021/acsinfecdis.3c00630	2024
	Comparison of the effects of dietary single and multi-probiotics on growth, non-specific immune responses and disease resistance in starry flounder, Platichthys stellatus.	Park Y, Moniruzzaman M, Lee S, Hong J, Won S, Lee JM, Yun H, Kim KW, Ko D, Bai SC.	Fish Shellfish Immunol	10.1016/j.fsi.2016.11.006	2016
Metabolism	Paenibacillus polymyxa rhizobacteria and their synthesized exoglycans in interaction with wheat roots: colonization and root hair deformation.	Yegorenkova IV, Tregubova KV, Ignatov VV.	Curr Microbiol	10.1007/s00284-012-0297-y	2013
	Detection of GFP-labeled Paenibacillus polymyxa in autofluorescing pine seedling tissues	Anand R, Chanway CP.	Biol Fertil Soils	10.1007/s00374-012-0727-9	2013
	Exploring China stepping into the dawn of chemical pesticide-free agriculture in 2050.	Wang X, Chi Y, Li F.	Front Plant Sci	10.3389/fpls.2022.942117	2022
Phylogeny	The Status of Soil Microbiome as Affected by the Application of Phosphorus Biofertilizer: Fertilizer Enriched with Beneficial Bacterial Strains.	Macik M, Gryta A, Sas-Paszt L, Frac M.	Int J Mol Sci	10.3390/ijms21218003	2020
	Gramicidin A is hydrolyzed by a d-stereospecific peptidase produced by Bacillus anthracis.	Kaman WE, Nazmi K, Voskamp-Visser AI, Bikker FJ.	Environ Microbiol Rep	10.1111/1758-2229.13069	2022
	Engineering Nitrogenases for Synthetic Nitrogen Fixation: From Pathway Engineering to Directed Evolution.	Bennett EM, Murray JW, Isalan M.	Biodes Res	10.34133/bdr.0005	2023
Enzymology	A 2,3-butanediol dehydrogenase from Paenibacillus polymyxa ZJ-9 for mainly producing R,R-2,3-butanediol: purification, characterization and cloning.	Gao J, Yang HH, Feng XH, Li S, Xu H.	J Basic Microbiol	10.1002/jobm.201200152	2013
	Comparative genomic analysis of azasugar biosynthesis.	Beal HE, Horenstein NA.	AMB Express	10.1186/s13568-021-01279-5	2021
	Exploration of the Biocontrol Activity of Bacillus atrophaeus Strain HF1 against Pear Valsa Canker Caused by Valsa pyri.	Yuan H, Shi B, Wang Z, Qin G, Hou H, Tu H, Wang L.	Int J Mol Sci	10.3390/ijms242015477	2023
	Spectroscopic and in silico investigation of the interaction between GH1 beta-glucosidase and ginsenoside Rb₁.	Zhong S, Yan M, Zou H, Zhao P, Ye H, Zhang T, Zhao C.	Food Sci Nutr	10.1002/fsn3.2153	2021
	Quantitative real-time PCR assay for detection of Paenibacillus polymyxa using membrane-fusion protein-based primers.	Cho MS, Park DS, Lee JW, Chi HY, Sohn SI, Jeon BK, Ma JB.	J Microbiol Biotechnol	10.4014/jmb.1207.07018	2012
Metabolism	Development of a New Paenibacillin-Producing Strain and Testing its Usability in Improving Food Safety.	Gerst MM, Huang E, Zhang L, Yousef AE.	J Food Sci	10.1111/1750-3841.12921	2015
	Antibacterial Regularity Mining Beneath the Systematic Activity Database of Lipopeptides Brevilaterins: An Instructive Activity Handbook for Its Food Application.	Liu Y, Han P, Jia Y, Chen Z, Li S, Ma A.	Foods	10.3390/foods11192991	2022
	Qualitative analysis of biosurfactants from Bacillus species exhibiting antifungal activity.	Sarwar A, Brader G, Corretto E, Aleti G, Ullah MA, Sessitsch A, Hafeez FY.	PLoS One	10.1371/journal.pone.0198107	2018
	The Lipid- and Polysaccharide-Rich Extracellular Polymeric Substances of Rhodococcus Support Biofilm Formation and Protection from Toxic Hydrocarbons.	Krivoruchko A, Nurieva D, Luppov V, Kuyukina M, Ivshina I.	Polymers (Basel)	10.3390/polym17141912	2025
Transcriptome	Bacterial Tolerance to 1-Butanol and 2-Butanol: Quantitative Assessment and Transcriptomic Response.	Arsov A, Petrova P, Gerginova M, Tsigoriyna L, Armenova N, Ignatova I, Petrov K.	Int J Mol Sci	10.3390/ijms252413336	2024
Metabolism	Soil microorganism colonization influenced the growth and secondary metabolite accumulation of Bletilla striata (Thunb.) Rchb. F.	Xu Q, Fu Y, Zhang J, Xu C, Yang C, Yuan Q, Xu J, Jiang W, Zhang Y, Zhou T, Xiao C.	BMC Microbiol	10.1186/s12866-025-03960-2	2025
	Comparison of the spores of Paenibacillus polymyxa prepared at different temperatures	Huo Z, Zhang N, Raza W, Huang X, Yong X, Liu Y, Wang D, Li S, Shen Q, Zhang R.	Biotechnol Lett		2012
	15N foliar dilution of western red cedar in response to seed inoculation with diazotrophic Paenibacillus polymyxa	Bal A, Chanway CP.	Biol Fertil Soils	10.1007/s00374-012-0699-9	2012
Transcriptome	Unraveling the Mechanism of the Endophytic Bacterial Strain Pseudomonas oryzihabitans GDW1 in Enhancing Tomato Plant Growth Through Modulation of the Host Transcriptome and Bacteriome.	Ahmed W, Wang Y, Ji W, Liu S, Zhou S, Pan J, Li Z, Wang F, Wang X.	Int J Mol Sci	10.3390/ijms26051922	2025
	Paenibacillus sp. Strain UY79, Isolated from a Root Nodule of Arachis villosa, Displays a Broad Spectrum of Antifungal Activity.	Costa A, Corallo B, Amarelle V, Stewart S, Pan D, Tiscornia S, Fabiano E.	Appl Environ Microbiol	10.1128/aem.01645-21	2022
	Colistin Resistance and Management of Drug Resistant Infections.	Sharma J, Sharma D, Singh A, Sunita K.	Can J Infect Dis Med Microbiol	10.1155/2022/4315030	2022
Metabolism	Investigations into the Biosynthesis, Regulation, and Self-Resistance of Toxoflavin in Pseudomonas protegens Pf-5.	Philmus B, Shaffer BT, Kidarsa TA, Yan Q, Raaijmakers JM, Begley TP, Loper JE.	Chembiochem	10.1002/cbic.201500247	2015
	Bioremediation of Pb contaminated water using a novel Bacillus sp. strain MHSD_36 isolated from Solanum nigrum.	Maumela P, Magida S, Serepa-Dlamini MH.	PLoS One	10.1371/journal.pone.0302460	2024
	Purification, structural characterization, and bioactive properties of exopolysaccharides from Saccharomyces cerevisiae HD-01.	Yang R, Liu L, Gao D, Zhao D.	Front Bioeng Biotechnol	10.3389/fbioe.2024.1455708	2024
	Enhancing carrot (Daucus carota var. sativa Hoffm.) plant productivity with combined rhizosphere microbial consortium.	Zhu L, Zhang P, Ma S, Yu Q, Wang H, Liu Y, Yang S, Chen Y.	Front Microbiol	10.3389/fmicb.2024.1466300	2024
	Comparison of the spores of Paenibacillus polymyxa prepared at different temperatures.	Huo Z, Zhang N, Raza W, Huang X, Yong X, Liu Y, Wang D, Li S, Shen Q, Zhang R.	Biotechnol Lett	10.1007/s10529-012-0853-3	2012
	Screening the Rumen of Balochi Camel (Camelus dromedarius) and Cashmere Goat (Capra hircus) to Isolate Enzyme-Producing Bacteria as Potential Additives for Animal Feed.	Gheibipour M, Ghiasi SE, Bashtani M, Torbati MBM, Motamedi H.	Indian J Microbiol	10.1007/s12088-024-01197-7	2024
	Specific labeling of outer membrane vesicles with antibiotic-conjugated probe reveals early bacterial infections in blood.	Li Q, Ou Z, Lin J, Tang D, He B, Wu Y, Huang X, Huang X, Ru B, Wang Q, Yao W, Situ B, Zheng L.	Nat Commun	10.1038/s41467-025-58676-8	2025
	Bacillus velezensis TB918 mitigates garlic dry rot disease by forming consortia with Pseudomonas in the rhizosphere and bulb.	Shi H, Sun B, Sun B, Wang X, Li B, Wu F, Tian T.	Front Microbiol	10.3389/fmicb.2025.1567108	2025
Enzymology	Characterization of sporulation histidine kinases of Paenibacillus polymyxa.	Park SY, Park SH, Choi SK.	Res Microbiol	10.1016/j.resmic.2012.02.003	2012
Metabolism	Active inclusion body formation using Paenibacillus polymyxa PoxB as a fusion partner in Escherichia coli.	Park SY, Park SH, Choi SK.	Anal Biochem	10.1016/j.ab.2012.04.002	2012
	Conversion of Food Waste into 2,3-Butanediol via Thermophilic Fermentation: Effects of Carbohydrate Content and Nutrient Supplementation.	Yu D, O'Hair J, Poe N, Jin Q, Pinton S, He Y, Huang H.	Foods	10.3390/foods11020169	2022
	Isolation, Characterization, and Evaluation of Native Rhizobacterial Consortia Developed From the Rhizosphere of Rice Grown in Organic State Sikkim, India, and Their Effect on Plant Growth.	Sherpa MT, Sharma L, Bag N, Das S.	Front Microbiol	10.3389/fmicb.2021.713660	2021
	Comparative study of polymyxin B and colistin sulfate in the treatment of severe comorbid patients infected with CR-GNB.	Wang J, Shah BK, Zhao J, Xiong J, Wang C, Xie S.	BMC Infect Dis	10.1186/s12879-023-08339-0	2023
	Phyllosphere microbial diversity and specific taxa mediate within-cultivar resistance to Phytophthora palmivora in cacao.	Schmidt JE, Puig AS, DuVal AE, Pfeufer EE.	mSphere	10.1128/msphere.00013-23	2023
	Plant Growth-Promoting Rhizobacteria Eliminate the Effect of Drought Stress in Plants: A Review.	Ahmad HM, Fiaz S, Hafeez S, Zahra S, Shah AN, Gul B, Aziz O, Mahmood-Ur-Rahman, Fakhar A, Rafique M, Chen Y, Yang SH, Wang X.	Front Plant Sci	10.3389/fpls.2022.875774	2022
Metabolism	Reconstitution and Substrate Specificity of the Thioether-Forming Radical S-Adenosylmethionine Enzyme in Freyrasin Biosynthesis.	Precord TW, Mahanta N, Mitchell DA.	ACS Chem Biol	10.1021/acschembio.9b00457	2019
Phylogeny	Clinicopathologic Features and Pathogens of Granulomatous Lobular Mastitis.	Li Y, Chen L, Zhang C, Wang Y, Hu J, Zhou M, Zhang X.	Breast Care (Basel)	10.1159/000529391	2023
	First Report on the Streptococcusgallolyticus (S. bovis Biotype I) DSM 13808 Exopolysaccharide Structure.	Maciejewska A, Lugowski C, Lukasiewicz J.	Int J Mol Sci	10.3390/ijms231911797	2022
Biotechnology	Mangrove soil as a source for novel xylanase and amylase as determined by cultivation-dependent and cultivation-independent methods.	Alves KJ, da Silva MCP, Cotta SR, Ottoni JR, van Elsas JD, de Oliveira VM, Andreote FD.	Braz J Microbiol	10.1007/s42770-019-00162-7	2020
	Natural Products and Pharmacological Properties of Symbiotic Bacillota (Firmicutes) of Marine Macroalgae.	Chukwudulue UM, Barger N, Dubovis M, Luzzatto Knaan T.	Mar Drugs	10.3390/md21110569	2023
	Enhancing Water Status and Nutrient Uptake in Drought-Stressed Lettuce Plants (Lactuca sativa L.) via Inoculation with Different Bacillus spp. Isolated from the Atacama Desert.	Santander C, Gonzalez F, Perez U, Ruiz A, Aroca R, Santos C, Cornejo P, Vidal G.	Plants (Basel)	10.3390/plants13020158	2024
Metabolism	Medium optimization and proteome analysis of (R,R)-2,3-butanediol production by Paenibacillus polymyxa ATCC 12321.	Li J, Wang W, Ma Y, Zeng AP.	Appl Microbiol Biotechnol	10.1007/s00253-012-4331-6	2013
	Evidence for Beneficial Physiological Responses of the Land Snail Cornu aspersum to Probiotics' (Lactobacillus plantarum) Dietary Intervention.	Efstratiou E, Feidantsis K, Makri V, Staikou A, Giantsis IA.	Animals (Basel)	10.3390/ani14060857	2024
Pathogenicity	Volatile organic compounds from Paenibacillus polymyxa KM2501-1 control Meloidogyne incognita by multiple strategies.	Cheng W, Yang J, Nie Q, Huang D, Yu C, Zheng L, Cai M, Thomashow LS, Weller DM, Yu Z, Zhang J.	Sci Rep	10.1038/s41598-017-16631-8	2017
	The Extracellular Lipopeptides and Volatile Organic Compounds of Bacillus subtilis DHA41 Display Broad-Spectrum Antifungal Activity against Soil-Borne Phytopathogenic Fungi.	Al-Mutar DMK, Noman M, Alzawar NSA, Qasim HH, Li D, Song F.	J Fungi (Basel)	10.3390/jof9080797	2023
	Genome Sequence of Paenibacillus polymyxa ATCC 12321, a Promising Strain for Optically Active (R,R)-2,3-Butanediol Production.	Tong YJ, Ji XJ, Liu LG, Shen MQ, Huang H.	Genome Announc	10.1128/genomea.00572-13	2013
Enzymology	Production and characterization of carboxymethyl cellulase from Paenibacillus polymyxa using mango peel as substrate.	Kumar D, Ashfaque M, Muthukumar M, Singh M, Garg N.	J Environ Biol		2012
	Innovative Microencapsulation of Polymyxin B for Enhanced Antimicrobial Efficacy via Coated Spray Drying.	Yousfan A, Al Khatib AO, Salman AMH, Abu Elella MH, Barrett G, Michael N, Zariwala MG, Al-Obaidi H.	Mol Pharm	10.1021/acs.molpharmaceut.4c00594	2025
	How thyme thrives under drought: insights into photosynthetic and membrane-protective mechanisms.	Kamyab A, Samsampour D.	BMC Biotechnol	10.1186/s12896-025-01026-9	2025
	Use of Phosphorus-Solubilizing Microorganisms as a Biotechnological Alternative: A Review.	Ramos Cabrera EV, Delgado Espinosa ZY, Solis Pino AF.	Microorganisms	10.3390/microorganisms12081591	2024
Metabolism	Isolation and partial characterization of antibacterial lipopeptide produced by Paenibacillus polymyxa HKA-15 against phytopathogen Xanthomonas campestris pv. phaseoli M-5.	Mageshwaran V, Walia S, Annapurna K.	World J Microbiol Biotechnol	10.1007/s11274-011-0888-y	2012
	Unlocking the hidden potential of Mexican teosinte seeds: revealing plant growth-promoting bacterial and fungal biocontrol agents.	De-la-Vega-Camarillo E, Hernandez-Garcia JA, Villa-Tanaca L, Hernandez-Rodriguez C.	Front Plant Sci	10.3389/fpls.2023.1247814	2023
Metabolism	Fermentative hydrogen production from Jerusalem artichoke by Clostridium tyrobutyricum expressing exo-inulinase gene.	Jiang L, Wu Q, Xu Q, Zhu L, Huang H.	Sci Rep	10.1038/s41598-017-07207-7	2017
	A novel major facilitator superfamily-type tripartite efflux system CprABC mediates resistance to polymyxins in Chryseobacterium sp. PL22-22A.	Zhang L, Wang M, Qi R, Yang Y, Liu Y, Ren N, Feng Z, Liu Q, Cao G, Zong G.	Front Microbiol	10.3389/fmicb.2024.1346340	2024
Metabolism	Treatment of waste gas containing low concentration of dimethyl sulphide in a high performance biotrickling filter.	Giri BS, Juwarkar A, Mudliar SN, Pandey RA.	Indian J Exp Biol		2013
	Effects of rhizobacteria Paenibacillus polymyxa APEC136 and >Bacillus subtilis APEC170 on biocontrol of postharvest pathogens of apple fruits.	Kim YS, Balaraju K, Jeon Y.	J Zhejiang Univ Sci B	10.1631/jzus.b1600117	2016
Metabolism	Paenibacillus polymyxa PKB1 produces variants of polymyxin B-type antibiotics.	Shaheen M, Li J, Ross AC, Vederas JC, Jensen SE.	Chem Biol	10.1016/j.chembiol.2011.09.017	2011
	First Report and Characterization of the mcr-1 Positive Multidrug-Resistant Escherichia coli Strain Isolated from Pigs in Croatia.	Kompes G, Duvnjak S, Reil I, Hendriksen RS, Sorensen LH, Zdelar-Tuk M, Habrun B, Cvetnic L, Bagaric A, Spicic S.	Microorganisms	10.3390/microorganisms11102442	2023
	Biological Control of Apple Anthracnose by Paenibacillus polymyxa APEC128, an Antagonistic Rhizobacterium.	Kim YS, Balaraju K, Jeon Y.	Plant Pathol J	10.5423/ppj.oa.01.2016.0015	2016
	Bacterial community-emitted volatiles regulate Arabidopsis growth and root architecture in a distinct manner of those from individual strains.	Turksoy GM, Berka M, Wippel K, Koprivova A, Carron RA, Ruger L, Cerny M, Andersen TG, Kopriva S.	Plant Commun	10.1016/j.xplc.2025.101351	2025
Pathogenicity	Lipopeptide biosurfactants from Paenibacillus polymyxa inhibit single and mixed species biofilms.	Quinn GA, Maloy AP, McClean S, Carney B, Slater JW.	Biofouling	10.1080/08927014.2012.738292	2012
	Analysis of endophyte diversity of two Gentiana plants species and the association with secondary metabolite.	Hou QZ, Chen DW, Wang YP, Ehmet N, Ma J, Sun K.	BMC Microbiol	10.1186/s12866-022-02510-4	2022
	Bio-organic fertilizer application significantly reduces the Fusarium oxysporum population and alters the composition of fungi communities of watermelon Fusarium wilt rhizosphere soil	Zhao S, Liu D, Ling N, Chen F, Fang W, Shen Q.	Biol Fertil Soils	10.1007/s00374-014-0898-7	2014
Pathogenicity	Antibacterial activity of metabolite produced by Paenibacillus polymyxa strain HKA-15 against Xanthomonas campestris pv. phaseoli.	Mageshwaran V, Walia S, Govindasamy V, Annapurna K.	Indian J Exp Biol		2011
	Strategies for Controlling the Sporulation in Fusarium spp.	Ajmal M, Hussain A, Ali A, Chen H, Lin H.	J Fungi (Basel)	10.3390/jof9010010	2022
Genetics	Complete Genome Sequence of Industrial Biocontrol Strain Paenibacillus polymyxa HY96-2 and Further Analysis of Its Biocontrol Mechanism.	Luo Y, Cheng Y, Yi J, Zhang Z, Luo Q, Zhang D, Li Y.	Front Microbiol	10.3389/fmicb.2018.01520	2018
	An experimental study to evaluate the effect of polymixin E (Colistin) alone or in combination with gentamicin in McCarey-Kaufman corneal preservation medium on various drug resistant bacterial and fungal isolates.	Sushmasri K, Joseph J, Chaurasia SR, Ramachandran C, Roy S.	Indian J Ophthalmol	10.4103/ijo.ijo_12_22	2022
	Performance Testing of Bacillus cereus Chromogenic Agar Media for Improved Detection in Milk and Other Food Samples.	Fuchs E, Raab C, Brugger K, Ehling-Schulz M, Wagner M, Stessl B.	Foods	10.3390/foods11030288	2022
Metabolism	The Paenibacillus polymyxa species is abundant among hydrogen-producing facultative anaerobic bacteria in Lake Averno sediment.	Lal S, Romano S, Chiarini L, Signorini A, Tabacchioni S.	Arch Microbiol	10.1007/s00203-011-0763-0	2012
Phylogeny	Screening of bacterial biocontrols against sapstain fungus (Lasiodiplodia theobromae Pat.) of rubberwood (Hevea brasiliensis Muell.Arg.).	Sajitha KL, Maria Florence EJ, Dev SA.	Res Microbiol	10.1016/j.resmic.2014.07.002	2014
	Parameter evaluation for developing phosphate-solubilizing Bacillus inoculants.	Bini D, Mattos BB, Figueiredo JEF, Dos Santos FC, Marriel IE, Dos Santos CA, de Oliveira-Paiva CA.	Braz J Microbiol	10.1007/s42770-023-01182-0	2024
	Critical-Illness: Combined Effects of Colistin and Vasoactive Drugs: A Pilot Study.	Stamatiou R, Vasilaki A, Tzini D, Tsolaki V, Zacharouli K, Ioannou M, Fotakopoulos G, Sgantzos M, Makris D.	Antibiotics (Basel)	10.3390/antibiotics12061057	2023
	Volatile Organic Compounds from a Lichen-Associated Bacterium, Paenibacillus etheri, Interact with Plant-Parasitic Cyst Nematodes.	Miral A, Fournet S, Porte C, Sauvager A, Montarry J, Tomasi S, Tranchimand S.	ACS Omega	10.1021/acsomega.2c05453	2022
	The carRS-ompV-virK operon of Vibrio cholerae senses antimicrobial peptides and activates the expression of multiple resistance systems.	Mathieu-Denoncourt A, Whitfield GB, Vincent AT, Berne C, Pauze-Foixet J, Mahieddine FC, Brun YV, Duperthuy M.	Sci Rep	10.1038/s41598-025-98217-3	2025
Enzymology	Hydrolytic Enzymes Producing Bacterial Endophytes of Some Poaceae Plants.	Dogan G, Taskin B.	Pol J Microbiol	10.33073/pjm-2021-026	2021
	Profiling of the beta-glucosidases identified in the genome of Penicillium funiculosum: insights from genomics, transcriptomics, proteomics, and homology-modeling studies.	Okereke OE, Gupta M, Ogunyewo OA, Sharma K, Kapoor S, Sinha T, Yazdani SS.	Appl Environ Microbiol	10.1128/aem.00704-23	2023
	Integrated genomics and proteomics analysis of Paenibacillus peoriae IBSD35 and insights into its antimicrobial characteristics.	Ngashangva N, Mukherjee PK, Sharma C, Kalita MC, Sarangthem I.	Sci Rep	10.1038/s41598-022-23613-y	2022
Genetics	Reprogramming Microbial CO₂-Metabolizing Chassis With CRISPR-Cas Systems.	Yu HY, Wang SG, Xia PF.	Front Bioeng Biotechnol	10.3389/fbioe.2022.897204	2022
	Expression of beta-Glucosidases from the Yak Rumen in Lactic Acid Bacteria: A Genetic Engineering Approach.	Wang C, Yang Y, Ma C, Sunkang Y, Tang S, Zhang Z, Wan X, Wei Y.	Microorganisms	10.3390/microorganisms11061387	2023
	Lettuce Contamination and Survival of Salmonella Typhimurium and Listeria monocytogenes in Hydroponic Nutrient Film Technique Systems.	Ilic S, Moodispaw MR, Madden LV, Lewis Ivey ML.	Foods	10.3390/foods11213508	2022
	Multi-year crop rotation and quicklime application promote stable peanut yield and high nutrient-use efficiency by regulating soil nutrient availability and bacterial/fungal community.	Yang L, Wang C, He X, Liang H, Wu Q, Sun X, Liu M, Shen P.	Front Microbiol	10.3389/fmicb.2024.1367184	2024
	Meta-analysis of plant growth-promoting rhizobacteria interaction with host plants: implications for drought stress response gene expression.	Ferrante R, Campagni C, Vettori C, Checcucci A, Garosi C, Paffetti D.	Front Plant Sci	10.3389/fpls.2023.1282553	2023
Metabolism	Identification of LI-F type antibiotics and di-n-butyl phthalate produced by Paenibacillus polymyxa.	Deng Y, Lu Z, Lu F, Zhang C, Wang Y, Zhao H, Bie X.	J Microbiol Methods	10.1016/j.mimet.2011.02.013	2011
	Effect of a Bacillus velezensis and Lysinibacillus fusiformis-based biofertilizer on phosphorus acquisition and grain yield of soybean.	Vitorino LC, da Silva EJ, Oliveira MS, Silva IO, Santos LDS, Mendonca MAC, Oliveira TCS, Bessa LA.	Front Plant Sci	10.3389/fpls.2024.1433828	2024
	Molecular Traits Underlying the Growth Promotion and Metabolite Accumulation in Rheum palmatum Inoculated with Endophytic Trichoderma citrinoviride HT-1.	Chen D, Shi W, Wang Y, Zhao J, Zhang H, Jia L, Sun K.	Int J Mol Sci	10.3390/ijms232113132	2022
Enzymology	Thermal denaturation of beta-glucosidase B from Paenibacillus polymyxa proceeds through a Lumry-Eyring mechanism.	Camarillo-Cadena M, Garza-Ramos G, Peimbert M, Perez-Hernandez G, Zubillaga RA.	Protein J	10.1007/s10930-011-9334-0	2011
	Detection and characterization of broad-spectrum antipathogen activity of novel rhizobacterial isolates and suppression of Fusarium crown and root rot disease of tomato.	Zhang L, Khabbaz SE, Wang A, Li H, Abbasi PA.	J Appl Microbiol	10.1111/jam.12728	2015
	Polymyxin B and ethylenediaminetetraacetic acid act synergistically against Pseudomonas aeruginosa and Staphylococcus aureus.	Hale SJM, Cameron AJ, Lux CA, Biswas K, Kim R, O'Carroll M, Harris PWR, Douglas RG, Wagner Mackenzie B.	Microbiol Spectr	10.1128/spectrum.01709-23	2024
Genetics	Whole-Genome Sequence Insight into the Plant-Growth-Promoting Bacterium Priestia filamentosa Strain AZC66 Obtained from Zygophyllum coccineum Rhizosphere.	Khalifa A, Alsowayeh N.	Plants (Basel)	10.3390/plants12101944	2023
	Screening and identification of abiotic stress-responsive efficient antifungal Pseudomonas spp. from rice rhizospheric soil.	Karnwal A.	BioTechnologia (Pozn)	10.5114/bta.2021.103758	2021
	A Mini-Review on the Co-growth and Interactions Among Microorganisms (Fungi and Bacteria) From Rhizosphere of Metal-Hyperaccumulators.	Cecchi G, Di Piazza S, Rosatto S, Mariotti MG, Roccotiello E, Zotti M.	Front Fungal Biol	10.3389/ffunb.2021.787381	2021
	Biofilm formation by Paenibacillus polymyxa strains differing in the production and rheological properties of their exopolysaccharides.	Yegorenkova IV, Tregubova KV, Matora LY, Burygin GL, Ignatov VV.	Curr Microbiol	10.1007/s00284-011-9896-2	2011
Phylogeny	Introducing key microbes from high productive soil transforms native soil microbial community of low productive soil.	Kandasamy S, Liu EYR, Patterson G, Saldias S, Ali S, Lazarovits G.	Microbiologyopen	10.1002/mbo3.895	2019
	Isolation and Characterization of Bacterial Endophytes from Small Nodules of Field-Grown Peanut.	Hossain MS, Frith C, Bhattacharyya SS, DeLaune PB, Gentry TJ.	Microorganisms	10.3390/microorganisms11081941	2023
Pathogenicity	Oxidative Stress Induced by Polymyxin E Is Involved in Rapid Killing of Paenibacillus polymyxa.	Yu Z, Zhu Y, Qin W, Yin J, Qiu J.	Biomed Res Int	10.1155/2017/5437139	2017
Pathogenicity	Chemical Transformation of Humic Acid Molecules under the Influence of Mineral, Fungal and Bacterial Fertilization in the Context of the Agricultural Use of Degraded Soils.	Boguta P, Skic K, Sokolowska Z, Frac M, Sas-Paszt L.	Molecules	10.3390/molecules26164921	2021
	Paenibacillus polymyxa NSY50 suppresses Fusarium wilt in cucumbers by regulating the rhizospheric microbial community.	Shi L, Du N, Shu S, Sun J, Li S, Guo S.	Sci Rep	10.1038/srep41234	2017
	Effects of Bacillus velezensis GUAL210 control on edible rose black spot disease and soil fungal community structure.	Dong W, Long T, Ma J, Wu N, Mo W, Zhou Z, Jin J, Zhou H, Ding H.	Front Microbiol	10.3389/fmicb.2023.1199024	2023
Metabolism	Development of a novel compound microbial agent for degradation of kitchen waste.	Zhao K, Xu R, Zhang Y, Tang H, Zhou C, Cao A, Zhao G, Guo H.	Braz J Microbiol	10.1016/j.bjm.2016.12.011	2017
	Bio-Organic Fertilizer: A Green Technology to Reduce Synthetic N and P Fertilizer for Rice Production.	Naher UA, Biswas JC, Maniruzzaman M, Khan FH, Sarkar MIU, Jahan A, Hera MHR, Hossain MB, Islam A, Islam MR, Kabir MS.	Front Plant Sci	10.3389/fpls.2021.602052	2021
Pathogenicity	Changes in Bacterial Endophyte Community Following Aspergillus flavus Infection in Resistant and Susceptible Maize Kernels.	Majumdar R, Kandel SL, Cary JW, Rajasekaran K.	Int J Mol Sci	10.3390/ijms22073747	2021
Pathogenicity	Dietary supplementation of probiotics affects growth, immune response and disease resistance of Cyprinus carpio fry.	Gupta A, Gupta P, Dhawan A.	Fish Shellfish Immunol	10.1016/j.fsi.2014.08.023	2014
Metabolism	A novel cold-adapted type I pullulanase of Paenibacillus polymyxa Nws-pp2: in vivo functional expression and biochemical characterization of glucans hydrolyzates analysis.	Wei W, Ma J, Chen SQ, Cai XH, Wei DZ.	BMC Biotechnol	10.1186/s12896-015-0215-z	2015
	Effects of milling and surfactants on suspensibility and spore viability in Paenibacillus polymyxa powder formulations	Liu Z, Wei H, Li Y, Li S, Zhang L, Chen H.	Biocontrol science and technology.	10.1080/09583157.2011.603408	2011
Metabolism	Effectively Converting Cane Molasses into 2,3-Butanediol Using Clostridiumljungdahlii by an Integrated Fermentation and Membrane Separation Process.	Yang Y, Deng T, Cao W, Shen F, Liu S, Zhang J, Liang X, Wan Y.	Molecules	10.3390/molecules27030954	2022
Pathogenicity	Polymyxin E Induces Rapid Paenibacillus polymyxa Death by Damaging Cell Membrane while Ca2+ Can Protect Cells from Damage.	Yu Z, Cai Y, Qin W, Lin J, Qiu J.	PLoS One	10.1371/journal.pone.0135198	2015
	Bacillus vallismortis LRB-5: a promising biocontrol agent for mitigating apple replant disease through pathogen suppression and growth promotion.	Duan Y, Ma Z, Jia Y, Xing H, Mao Z, Mao K, Zhang Z, Li C, Ma F.	Stress Biol	10.1007/s44154-025-00246-5	2025
	Paenibacillus polymyxa A26 Sfp-type PPTase inactivation limits bacterial antagonism against Fusarium graminearum but not of F. culmorum in kernel assay.	Abd El Daim IA, Haggblom P, Karlsson M, Stenstrom E, Timmusk S.	Front Plant Sci	10.3389/fpls.2015.00368	2015
	Chronic Collection of Cerebrospinal Fluid from Rhesus Macaques (Macaca mulatta) with Cisterna Magna Ports: Update on Refinements.	Gilberto DB, Michener MS, Smith BE, Szczerba PJ, Holahan MA, Gray TL, Motzel SL.	Comp Med	10.30802/aalas-cm-21-000060	2022
	Combating iron and zinc malnutrition through mineral biofortification in maize through plant growth promoting Bacillus and Paenibacillus species.	Ahmad M, Hussain A, Dar A, Luqman M, Ditta A, Iqbal Z, Ahmad HT, Nazli F, Soufan W, Almutairi K, Sabagh AE.	Front Plant Sci	10.3389/fpls.2022.1094551	2022
	Analysis of endophyte diversity of Gentiana officinalis among different tissue types and ages and their association with four medicinal secondary metabolites.	Hou Q, Chen D, Wang YP, Ehmet N, Ma J, Sun K.	PeerJ	10.7717/peerj.13949	2022
	Therapeutic and protective approaches to combat Campylobacter jejuni infections.	Sharafutdinov I, Linz B, Tegtmeyer N, Backert S.	Front Pharmacol	10.3389/fphar.2025.1572616	2025
	PGPR strain Paenibacillus polymyxa SQR-21 potentially benefits watermelon growth by re-shaping root protein expression.	E Y, Yuan J, Yang F, Wang L, Ma J, Li J, Pu X, Raza W, Huang Q, Shen Q.	AMB Express	10.1186/s13568-017-0403-4	2017
	Volatiles of Shiraia fruiting body-associated Pseudomonas putida No.24 stimulate fungal hypocrellin production.	Xu R, Huang QY, Shen WH, Li XP, Zheng LP, Wang JW.	Synth Syst Biotechnol	10.1016/j.synbio.2023.06.004	2023
Genetics	scMAR-Seq: a novel workflow for targeted single-cell genomics of microorganisms using radioactive labeling.	Lo H-Y, Wink K, Nitz H, Kastner M, Belder D, Muller JA, Kaster A-K.	mSystems	10.1128/msystems.00998-23	2023
	Effect of the Nonpathogenic Strain Fusarium oxysporum FO12 on Fe Acquisition in Rice (Oryza sativa L.) Plants.	Nunez-Cano J, Romera FJ, Prieto P, Garcia MJ, Sevillano-Cano J, Agusti-Brisach C, Perez-Vicente R, Ramos J, Lucena C.	Plants (Basel)	10.3390/plants12173145	2023
	Hyperproduction of extracellular polymeric substance in Pseudomonas fluorescens for efficient chromium (VI) absorption.	Yang L, Chen Z, Zhang Y, Lu F, Liu Y, Cao M, He N.	Bioresour Bioprocess	10.1186/s40643-023-00638-3	2023
Genetics	Tailor-made exopolysaccharides-CRISPR-Cas9 mediated genome editing in Paenibacillus polymyxa.	Rutering M, Cress BF, Schilling M, Ruhmann B, Koffas MAG, Sieber V, Schmid J.	Synth Biol (Oxf)	10.1093/synbio/ysx007	2017
	Combining antagonistic endophytic bacteria in different growth stages of cotton for control of Verticillium wilt	Yang P, Sun Zx, Liu Sy, Lu Hx, Zhou Y, Sun M.	Crop Prot	10.1016/j.cropro.2012.12.020	2013
	Systematic review on microbiome-related nutritional interventions interfering with the colonization of foodborne pathogens in broiler gut to prevent contamination of poultry meat.	Mekonnen YT, Savini F, Indio V, Seguino A, Giacometti F, Serraino A, Candela M, De Cesare A.	Poult Sci	10.1016/j.psj.2024.103607	2024
Metabolism	[Fusion expression of fibrinolytic enzyme gene PPFE-I from endophytic Paenibacillus polymyxa in Escherichia coli and activity analysis].	Lu F, Lu Z, Bie X, Lin Q, Zhang C, Cao L, Guo Y, Tang Y.	Sheng Wu Gong Cheng Xue Bao		2010
	Use of ELISA with antiexopolysaccharide antibodies to evaluate wheat-root colonization by the rhizobacterium Paenibacillus polymyxa.	Yegorenkova IV, Tregubova KV, Matora LY, Burygin GL, Ignatov VV.	Curr Microbiol	10.1007/s00284-010-9622-5	2010
Enzymology	Isolation and molecular identification of endophytic diazotrophs from seeds and stems of three cereal crops.	Liu H, Zhang L, Meng A, Zhang J, Xie M, Qin Y, Faulk DC, Zhang B, Yang S, Qiu L.	PLoS One	10.1371/journal.pone.0187383	2017
	Promotion of growth, health and stress tolerance of Styrian oil pumpkins by bacterial endophytes	Furnkranz M, Adam E, Muller H, Grube M, Huss H, Winkler J, Berg G.	Eur J Plant Pathol	10.1007/s10658-012-0033-2	2012
	Isolation and characterisation of fusaricidin-type compound-producing strain of Paenibacillus polymyxa SQR-21 active against Fusarium oxysporum f.sp. nevium	Raza W, Yang X, Wu H, Wang Y, Xu Y, Shen Q.	Eur J Plant Pathol	10.1007/s10658-009-9496-1	2009
Metabolism	Optimization of medium for one-step fermentation of inulin extract from Jerusalem artichoke tubers using Paenibacillus polymyxa ZJ-9 to produce R,R-2,3-butanediol.	Gao J, Xu H, Li QJ, Feng XH, Li S.	Bioresour Technol	10.1016/j.biortech.2010.03.143	2010
	Physiological response of North China red elder container seedlings to inoculation with plant growth-promoting rhizobacteria under drought stress.	Liu F, Ma H, Du Z, Ma B, Liu X, Peng L, Zhang W.	PLoS One	10.1371/journal.pone.0226624	2019
	Investigation and Assessment for an effective approach to the reclamation of Polycyclic Aromatic Hydrocarbon (PAHs) contaminated site: SIN Bagnoli, Italy.	Guarino C, Zuzolo D, Marziano M, Conte B, Baiamonte G, Morra L, Benotti D, Gresia D, Stacul ER, Cicchella D, Sciarrillo R.	Sci Rep	10.1038/s41598-019-48005-7	2019
Metabolism	Precursor Amino Acids Inhibit Polymyxin E Biosynthesis in Paenibacillus polymyxa, Probably by Affecting the Expression of Polymyxin E Biosynthesis-Associated Genes.	Yu Z, Guo C, Qiu J.	Biomed Res Int	10.1155/2015/690830	2015
Metabolism	The genome of the plant growth-promoting rhizobacterium Paenibacillus polymyxa M-1 contains nine sites dedicated to nonribosomal synthesis of lipopeptides and polyketides.	Niu B, Rueckert C, Blom J, Wang Q, Borriss R.	J Bacteriol	10.1128/jb.05806-11	2011
	Mechanism on the promotion of host growth and enhancement of salt tolerance by Bacillaceae isolated from the rhizosphere of Reaumuria soongorica.	Bao X, Chong P, He C, Wang X, Zhang F.	Front Microbiol	10.3389/fmicb.2024.1408622	2024
	Evaluation of Agar Dilution Method in Susceptibility Testing of Polymyxins for Enterobacteriaceae and Non-Fermentative Rods: Advantages Compared to Broth Microdilution and Broth Macrodilution.	Hu X, Sun L, Nie T, Yang Y, Wang X, Pang J, Lu X, Li X, Lu Y, Li C, Yang X, Meng Y, Li G, You X.	Antibiotics (Basel)	10.3390/antibiotics11101392	2022
	Effect of soil bioremediation on soil microbial community structure aimed at controlling tobacco bacterial wilt.	Liu Y, Li H, Li X, Zhang H, Zhu J, Peng Y, Sun G, Xu J.	Appl Microbiol Biotechnol	10.1007/s00253-023-12753-4	2023
	Investigation of factors influencing spore germination of Paenibacillus polymyxa ACCC10252 and SQR-21.	Huo Z, Yang X, Raza W, Huang Q, Xu Y, Shen Q.	Appl Microbiol Biotechnol	10.1007/s00253-010-2520-8	2010
	Organic mulch can suppress litchi downy blight through modification of soil microbial community structure and functional potentials.	Xu D, Ling J, Qiao F, Xi P, Zeng Y, Zhang J, Lan C, Jiang Z, Peng A, Li P.	BMC Microbiol	10.1186/s12866-022-02492-3	2022
	Evaluating the potential of Bacillus licheniformis YZCUO202005 isolated from lichens in maize growth promotion and biocontrol.	Medison RG, Jiang J, Medison MB, Tan LT, Kayange CDM, Sun Z, Zhou Y.	Heliyon	10.1016/j.heliyon.2023.e20204	2023
	Broad spectrum antimicrobial activities from spore-forming bacteria isolated from the Vietnam Sea.	Chau KM, Van Quyen D, Fraser JM, Smith AT, Van TTH, Moore RJ.	PeerJ	10.7717/peerj.10117	2020
Enzymology	Variation of rhizosphere bacterial community in watermelon continuous mono-cropping soil by long-term application of a novel bioorganic fertilizer.	Ling N, Deng K, Song Y, Wu Y, Zhao J, Raza W, Huang Q, Shen Q.	Microbiol Res	10.1016/j.micres.2013.10.004	2014
	Screening and Characterization of Probiotics Isolated from Traditional Fermented Products of Ethnic-Minorities in Northwest China and Evaluation Replacing Antibiotics Breeding Effect in Broiler.	Ye Z, Ji B, Peng Y, Song J, Zhao T, Wang Z.	Pol J Microbiol	10.33073/pjm-2024-025	2024
Metabolism	Additive effect of single amino acid replacements on the kinetic stability of beta-glucosidase B.	Camarillo-Cadena M, Garza-Ramos G, Peimbert M, Polaina J, Perez-Hernandez G, Zubillaga RA.	Protein J	10.1007/s10930-012-9445-2	2012
	Aerial Warfare: A Volatile Dialogue between the Plant Pathogen Verticillium longisporum and Its Antagonist Paenibacillus polymyxa.	Rybakova D, Rack-Wetzlinger U, Cernava T, Schaefer A, Schmuck M, Berg G.	Front Plant Sci	10.3389/fpls.2017.01294	2017
	Site-directed modification of the adenylation domain of the fusaricidin nonribosomal peptide synthetase for enhanced production of fusaricidin analogs	Han JW, Kim EY, Lee JM, Kim YS, Bang E, Kim BS.	Biotechnol Lett		2012
	A new textile-based approach to assess the antimicrobial activity of volatiles	Liebminger S, Gabriele Berg, Lisa Oberauner, Martin Aichner, Massimiliano Cardinale, Michael FA 1/4rnkranz.	Text Res J	10.1177/0040517511429607	2012
	Use of response surface methodology to evaluate the effect of metal ions (Ca2+, Ni2+, Mn2+, Cu2+) on production of antifungal compounds by Paenibacillus polymyxa.	Raza W, Hongsheng W, Qirong S.	Bioresour Technol	10.1016/j.biortech.2009.10.029	2010
	Influence of Endogenous Factors of Food Matrices on Avidin-Biotin Immunoassays for the Detection of Bacitracin and Colistin in Food.	Burkin MA, Galvidis IA, Eremin SA.	Foods	10.3390/foods11020219	2022
	Efficacy of root-associated fungi and PGPR on the growth of Pisum sativum (cv. Arkil) and reproduction of the root-knot nematode Meloidogyne incognita.	Akhtar MS, Panwar J.	J Basic Microbiol	10.1002/jobm.201100610	2013
Metabolism	Production of a newly isolated Paenibacillus polymyxa biocontrol agent using monosodium glutamate wastewater and potato wastewater.	Gu L, Bai Z, Jin B, Zhang J, Li W, Zhuang G, Zhang H.	J Environ Sci (China)	10.1016/s1001-0742(09)60267-9	2010
	Bacteria, yeasts, and fungi associated with larval food of Brazilian native stingless bees.	Santos ACC, Borges LDF, Rocha NDC, de Carvalho Azevedo VA, Bonetti AM, Dos Santos AR, da Rocha Fernandes G, Dantas RCC, Ueira-Vieira C.	Sci Rep	10.1038/s41598-023-32298-w	2023
	Cyclic Lipopeptides of Bacillus amyloliquefaciens DHA6 Are the Determinants to Suppress Watermelon Fusarium Wilt by Direct Antifungal Activity and Host Defense Modulation.	Al-Mutar DMK, Noman M, Abduljaleel Alzawar NS, Azizullah, Li D, Song F.	J Fungi (Basel)	10.3390/jof9060687	2023
	Limited effectiveness of selected bioeffectors combined with recycling phosphorus fertilizers for maize cultivation under Swiss farming conditions.	Symanczik S, Lipp C, Mader P, Thonar C, Kundel D.	Front Plant Sci	10.3389/fpls.2023.1239393	2023
	Scaling Catalytic Contributions of Small Self-Cleaving Ribozymes.	Egger M, Bereiter R, Mair S, Micura R.	Angew Chem Int Ed Engl	10.1002/anie.202207590	2022
Metabolism	Effects of initial inoculation density of Paenibacillus polymyxa on colony formation and starch-hydrolytic activity in relation to root rot in ginseng.	Jeon YH, Kim SG, Hwang I, Kim YH.	J Appl Microbiol	10.1111/j.1365-2672.2010.04674.x	2010
Enzymology	Removal of Cadmium from aqueous solution by polysaccharide produced from Paenibacillus polymyxa.	Mokaddem H, Sadaoui Z, Boukhelata N, Azouaou N, Kaci Y.	J Hazard Mater	10.1016/j.jhazmat.2009.07.116	2009
	Endophytic bacteria isolated from Urtica dioica L.- preliminary screening for enzyme and polyphenols production.	Marchut-Mikolajczyk O, Chlebicz M, Kawecka M, Michalak A, Prucnal F, Nielipinski M, Filipek J, Jankowska M, Perek Z, Drozdzynski P, Rutkowska N, Otlewska A.	Microb Cell Fact	10.1186/s12934-023-02167-2	2023
Metabolism	Phylogeny of 16S rRNA and nifH genes and regulation of nitrogenase activity by oxygen and ammonium in the genus Paenibacillus.	Xie JB, Bai LQ, Wang LY, Chen SF.	Mikrobiologiia	10.1134/s0026261712060173	2012
	Genome-based analyses to learn from and about Paenibacillus sonchi genomovar Riograndensis SBR5T.	Wendisch VF, Brito LF, Passaglia LMP.	Genet Mol Biol	10.1590/1678-4685-gmb-2023-0115	2024
	Biological Control of Bacterial Fruit Blotch of Watermelon Pathogen (Acidovorax citrulli) with Rhizosphere Associated Bacteria.	Adhikari M, Yadav DR, Kim SW, Um YH, Kim HS, Lee SC, Song JY, Kim HG, Lee YS.	Plant Pathol J	10.5423/ppj.oa.09.2016.0187	2017
Metabolism	Assessment of root-associated paenibacillus polymyxa groups on growth promotion and induced systemic resistance in pepper.	Phi QT, Park YM, Seul KJ, Ryu CM, Park SH, Kim JG, Ghim SY.	J Microbiol Biotechnol		2010
Genetics	Mining biosynthetic gene clusters in Virgibacillus genomes.	Othoum G, Bougouffa S, Bokhari A, Lafi FF, Gojobori T, Hirt H, Mijakovic I, Bajic VB, Essack M.	BMC Genomics	10.1186/s12864-019-6065-7	2019
	Fungal Inhibition of Agricultural Soil Pathogen Stimulated by Nitrogen-Reducing Fertilization.	Shen MC, Shi YZ, Bo GD, Liu XM.	Front Bioeng Biotechnol	10.3389/fbioe.2022.866419	2022
	[Effect of Paenibacillus polymyxa lectin on cytokine status of animals].	Gorel'nikova EA, Tikhomirova EI, Karpunina LV.	Zh Mikrobiol Epidemiol Immunobiol		2009
Genetics	Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity.	Ma M, Wang C, Ding Y, Li L, Shen D, Jiang X, Guan D, Cao F, Chen H, Feng R, Wang X, Ge Y, Yao L, Bing X, Yang X, Li J, Du B.	J Bacteriol	10.1128/jb.01234-10	2011
	Coinoculation impact on plant growth promotion: a review and meta-analysis on coinoculation of rhizobia and plant growth-promoting bacilli in grain legumes.	Kaschuk G, Auler AC, Vieira CE, Dakora FD, Jaiswal SK, da Cruz SP.	Braz J Microbiol	10.1007/s42770-022-00800-7	2022
Enzymology	Detection and quantification of Paenibacillus polymyxa in the rhizosphere of wild barley (Hordeum spontaneum) with real-time PCR.	Timmusk S, Paalme V, Lagercrantz U, Nevo E.	J Appl Microbiol	10.1111/j.1365-2672.2009.04265.x	2009
Metabolism	Insight into metabolic pathways of the potential biofuel producer, Paenibacillus polymyxa ICGEB2008.	Adlakha N, Pfau T, Ebenhoh O, Yazdani SS.	Biotechnol Biofuels	10.1186/s13068-015-0338-4	2015
Metabolism	Determination of ammonia-oxidizing bacteria based on time-resolved fluorescence and tandem probe.	Lv X, Li Z, Niu C, Ruan M, Hang D, Zeng G.	Water Sci Technol	10.2166/wst.2012.335	2012
	Inhibitory Effect of Paenibacillus polymyxa GBR-462 on Phytophthora capsici Causing Phytophthora Blight in Chili Pepper	Kim Sg, Khan Z, Jeon YH, Kim YH.	Journal of phytopathology.	10.1111/j.1439-0434.2008.01490.x	2009
	Norwegian Soils and Waters Contain Mesophilic, Plastic-Degrading Bacteria.	Charnock C.	Microorganisms	10.3390/microorganisms9010094	2021
Metabolism	Site-directed modification of the adenylation domain of the fusaricidin nonribosomal peptide synthetase for enhanced production of fusaricidin analogs.	Han JW, Kim EY, Lee JM, Kim YS, Bang E, Kim BS.	Biotechnol Lett	10.1007/s10529-012-0913-8	2012
Enzymology	The current strategies and parameters for the enhanced microbial production of 2,3-butanediol.	Hakizimana O, Matabaro E, Lee BH.	Biotechnol Rep (Amst)	10.1016/j.btre.2019.e00397	2020
	Lipid Microenvironment Modulates the Pore-Forming Ability of Polymyxin B.	Zakharova AA, Efimova SS, Ostroumova OS.	Antibiotics (Basel)	10.3390/antibiotics11101445	2022
	Maize stalk rot caused by Fusarium graminearum alters soil microbial composition and is directly inhibited by Bacillus siamensis isolated from rhizosphere soil.	Zhang K, Wang L, Si H, Guo H, Liu J, Jia J, Su Q, Wang Y, Zang J, Xing J, Dong J.	Front Microbiol	10.3389/fmicb.2022.986401	2022
	[The role of Paenibacillus polymyxa lectin in the macrophages-mediated killing of bacteria].	Abrosimova OV, Tikhomirova EI, Karpunina LV.	Zh Mikrobiol Epidemiol Immunobiol		2008
Pathogenicity	Autotoxins in continuous tobacco cropping soils and their management.	Chen Y, Yang L, Zhang L, Li J, Zheng Y, Yang W, Deng L, Gao Q, Mi Q, Li X, Zeng W, Ding X, Xiang H.	Front Plant Sci	10.3389/fpls.2023.1106033	2023
Metabolism	Use of bottom ash of waste coal as an effective microbial carrier.	Kim MK, Islam SM, Yun MG, Kim JM, Cho JJ, Kang TH, Yun HD.	Biosci Biotechnol Biochem	10.1271/bbb.110495	2011
Genetics	Draft genome sequence of Paenibacillus peoriae strain KCTC 3763T.	Jeong H, Choi SK, Park SY, Kim SH, Park SH.	J Bacteriol	10.1128/jb.06577-11	2012
Metabolism	Isolation and characterization of dimethyl sulfide (DMS)-degrading bacteria from soil and biofilter treating waste gas containing DMS from the laboratory and pulp and paper industry.	Giri BS, Juwarkar AA, Satpute DB, Mudliar SN, Pandey RA.	Appl Biochem Biotechnol	10.1007/s12010-012-9647-2	2012
	Volatile emission compounds from plant growth-promoting bacteria are responsible for the antifungal activity against F. solani.	Gutierrez-Santa Ana A, Carrillo-Cerda HA, Rodriguez-Campos J, Kirchmayr MR, Contreras-Ramos SM, Velazquez-Fernandez JB.	3 Biotech	10.1007/s13205-020-02290-6	2020
Genetics	Discovery and Characterization of Polymyxin-Resistance Genes pmrE and pmrF from Sediment and Seawater Microbiome.	Joo H, Eom H, Cho Y, Rho M, Song WJ.	Microbiol Spectr	10.1128/spectrum.02736-22	2023
	Paenibacillus polymyxa antagonizes oomycete plant pathogens Phytophthora palmivora and Pythium aphanidermatum.	Timmusk S, van West P, Gow NA, Huffstutler RP.	J Appl Microbiol	10.1111/j.1365-2672.2009.04123.x	2009
	Succession and potential role of bacterial communities during Pleurotus ostreatus production.	Banfi R, Pohner Z, Szabo A, Herczeg G, Kovacs GM, Nagy A, Marialigeti K, Vajna B.	FEMS Microbiol Ecol	10.1093/femsec/fiab125	2021
Pathogenicity	Determination of Colistin Resistance by Simple Disk Diffusion Test Using Modified Mueller-Hinton Agar.	Uwizeyimana JD, Kim D, Lee H, Byun JH, Yong D.	Ann Lab Med	10.3343/alm.2020.40.4.306	2020
	Identification and molecular characterization of a psychrophilic GH1 beta-glucosidase from the subtropical soil microorganism Exiguobacterium sp. GXG2.	Yin B, Gu H, Mo X, Xu Y, Yan B, Li Q, Ou Q, Wu B, Guo C, Jiang C.	AMB Express	10.1186/s13568-019-0873-7	2019
	The Integrated Effect of Microbial Inoculants and Biochar Types on Soil Biological Properties, and Plant Growth of Lettuce (Lactuca sativa L.).	Ma H, Shurigin V, Jabborova D, Dela Cruz JA, Dela Cruz TE, Wirth S, Bellingrath-Kimura SD, Egamberdieva D.	Plants (Basel)	10.3390/plants11030423	2022
	Biocontrol activity of Bacillus halotolerans strain Pl7 against Botryosphaeria dothidea causing apple postharvest decay and potential mechanisms.	Yuan H, Yuan M, Shi B, Wang Z, Huang T, Zhu J, Hou H, Wang L, Tu H.	Front Microbiol	10.3389/fmicb.2022.1058167	2022
	Extended Plant Metarhizobiome: Understanding Volatile Organic Compound Signaling in Plant-Microbe Metapopulation Networks.	Raza W, Wei Z, Jousset A, Shen Q, Friman VP.	mSystems	10.1128/msystems.00849-21	2021
	Identification of Putative Novel Class-I Lanthipeptides in Firmicutes: A Combinatorial In Silico Analysis Approach Performed on Genome Sequenced Bacteria and a Close Inspection of Z-Geobacillin Lanthipeptide Biosynthesis Gene Cluster of the Thermophilic Geobacillus sp. Strain ZGt-1.	Alkhalili RN, Canback B.	Int J Mol Sci	10.3390/ijms19092650	2018
	Plant growth-promoting rhizobacteria, Paenibacillus polymyxa and Paenibacillus lentimorbus suppress disease complex caused by root-knot nematode and fusarium wilt fungus.	Son SH, Khan Z, Kim SG, Kim YH.	J Appl Microbiol	10.1111/j.1365-2672.2009.04238.x	2009
	Root exudates and chemotactic strains mediate bacterial community assembly in the rhizosphere soil of Casuarina equisetifolia L.	Lin Q, Li M, Wang Y, Xu Z, Li L.	Front Plant Sci	10.3389/fpls.2022.988442	2022
Metabolism	[Composition and immunochemical characteristics of exopolysaccharides from the rhizobacterium Paenibacillus polymyxa 1465].	Egorenkova IV, Tregubova KV, Matora LIu, Burygin GL, Ignatov VV.	Mikrobiologiia	10.1134/s002626170805007x	2008
	An integrated high throughput strategy to screen mutants of Paenibacillus polymyxa with high polymyxin E-productivity	Wang J, Tao Y, Xu Z, Xu R, Cen P, Wang X.	World J Microbiol Biotechnol	10.1007/s11274-008-9686-6	2008
	Effects of Humic Substances on the Growth of Pseudomonas plecoglossicida 2,4-D and Wheat Plants Inoculated with This Strain.	Feoktistova A, Bakaeva M, Timergalin M, Chetverikova D, Kendjieva A, Rameev T, Hkudaygulov G, Nazarov A, Kudoyarova G, Chetverikov S.	Microorganisms	10.3390/microorganisms10051066	2022
	Evaluation and identification of metabolites produced by Cytobacillus firmus in the interaction with Arabidopsis thaliana plants and their effect on Solanum lycopersicum.	Arteaga-Rios IG, Mendez-Rodriguez KB, Ocampo-Perez R, Guerrero-Gonzalez ML, Rodriguez-Guerra R, Delgado-Sanchez P.	Curr Res Microb Sci	10.1016/j.crmicr.2024.100312	2025
	Soybean and Cotton Spermosphere Soil Microbiome Shows Dominance of Soilborne Copiotrophs.	Olofintila OE, Noel ZA.	Microbiol Spectr	10.1128/spectrum.00377-23	2023
	Isolation of entomopathogenic Bacillus from a biodynamic olive farm and their pathogenicity to lepidopteran and coleopteran insect pests	Blibech I, Ksantini M, Chaieb I, Jlassi B, Rhouma A, Jaoua S, Aifa S.	Crop Prot	10.1016/j.cropro.2011.09.020	2012
	Elicitation of Bacillus cereus-Amazcala (B.c-A) with SiO₂ Nanoparticles Improves Its Role as a Plant Growth-Promoting Bacteria (PGPB) in Chili Pepper Plants.	Ferrusquia-Jimenez NI, Gonzalez-Arias B, Rosales A, Esquivel K, Escamilla-Silva EM, Ortega-Torres AE, Guevara-Gonzalez RG.	Plants (Basel)	10.3390/plants11243445	2022
	Pharmacokinetic/Pharmacodynamic Based Breakpoints of Polymyxin B for Bloodstream Infections Caused by Multidrug-Resistant Gram-Negative Pathogens.	Bian X, Liu X, Hu F, Feng M, Chen Y, Bergen PJ, Li J, Li X, Guo Y, Zhang J.	Front Pharmacol	10.3389/fphar.2021.785893	2021
	Production status and research advancement on root rot disease of faba bean (Vicia faba L.) in China.	Yu H, Yang F, Hu C, Yang X, Zheng A, Wang Y, Tang Y, He Y, Lv M.	Front Plant Sci	10.3389/fpls.2023.1165658	2023
	Rapid Determination of 21 Chinese Domestically Registered Pesticides in Ginseng Using Cleanup Based on Zirconium-Oxide-Modified Silica and Ultrahigh-Performance Liquid Chromatography-Tandem Mass Spectrometry.	Zhang Z, Lu Z, Fang N, Fang N, Hou Z, Hou Z, Ren W, Li Y, Lu Z.	J Anal Methods Chem	10.1155/2021/5516563	2021
	Molecular Engineering of Polymyxin B for Imaging and Treatment of Bacterial Infections.	Wu M, He S, Tang H, Hu H, Shi Y.	Front Chem	10.3389/fchem.2021.809584	2021
Metabolism	Hydrogen production and anaerobic decolorization of wastewater containing Reactive Blue 4 by a bacterial consortium of Salmonella subterranea and Paenibacillus polymyxa.	Watanapokasin RY, Boonyakamol A, Sukseree S, Krajarng A, Sophonnithiprasert T, Kanso S, Imai T.	Biodegradation	10.1007/s10532-008-9232-0	2009
Metabolism	Functional analysis of multiple nifB genes of Paenibacillus strains in synthesis of Mo-, Fe- and V-nitrogenases.	Li Q, Zhang H, Zhang L, Chen S.	Microb Cell Fact	10.1186/s12934-021-01629-9	2021
Metabolism	Alterins Produced by Oyster-Associated Pseudoalteromonas Are Antibacterial Cyclolipopeptides with LPS-Binding Activity.	Desriac F, El Harras A, Simon M, Bondon A, Brillet B, Le Chevalier P, Pugniere M, Got P, Destoumieux-Garzon D, Fleury Y.	Mar Drugs	10.3390/md18120630	2020
Biotechnology	Biocontrol of Fusarium graminearum, a Causal Agent of Fusarium Head Blight of Wheat, and Deoxynivalenol Accumulation: From In Vitro to In Planta.	Abbas A, Yli-Mattila T.	Toxins (Basel)	10.3390/toxins14050299	2022
Metabolism	Antimicrobial activity of Paenibacillus polymyxa SCE2 against some mycotoxin-producing fungi.	Tupinamba G, da Silva AJ, Alviano CS, Souto-Padron T, Seldin L, Alviano DS.	J Appl Microbiol	10.1111/j.1365-2672.2008.03844.x	2008
	In vitro antifungal activity of pelgipeptins against human pathogenic fungi and Candida albicans biofilms.	Fulgencio DLA, da Costa RA, Guilhelmelli F, Silva CMS, Ortega DB, de Araujo TF, Silva PS, Silva-Pereira I, Albuquerque P, Barreto CC.	AIMS Microbiol	10.3934/microbiol.2021003	2021
Enzymology	Cloning of two cellulase genes from endophytic Paenibacillus polymyxa GS01 and comparison with cel 44C-man 26A.	Cho KM, Hong SJ, Math RK, Islam SM, Kim JO, Lee YH, Kim H, Yun HD.	J Basic Microbiol	10.1002/jobm.200700281	2008
	Selection of phosphorus solubilizing bacteria with biocontrol potential for growth in phosphorus rich animal bone charcoal	Postma J, Nijhuis EH, Someus E.	Appl Soil Ecol	10.1016/j.apsoil.2010.08.016	2010
	Efficacy of Coniothyrium minitans on lettuce drop caused by Sclerotinia minor in desert agroecosystem	Chitrampalam P, Cox CA, Turini TA, Pryor BM.	Biol Control	10.1016/j.biocontrol.2010.07.003	2010
Enzymology	Microbial diversity inside pumpkins: microhabitat-specific communities display a high antagonistic potential against phytopathogens.	Furnkranz M, Lukesch B, Muller H, Huss H, Grube M, Berg G.	Microb Ecol	10.1007/s00248-011-9942-4	2012
	Changes in the activity of the multifunctional beta-glycosyl hydrolase (Cel44C-Man26A) from Paenibacillus polymyxa by removal of the C-terminal region to minimum size	Cho KM, Math RK, Hong SY, Asraful Islam SM, Kim JO, Hong SJ, Kim H, Yun HD.	Biotechnol Lett		2008
	Effects Induced by the Agricultural Application of Probiotics on Antioxidant Potential of Strawberries.	Mockeviciute R, Jurkoniene S, Gaveliene V, Jankovska-Bortkevic E, Socik B, Armalyte G, Budrys R.	Plants (Basel)	10.3390/plants11060831	2022
	Endophytic Bacteria and Essential Oil from Origanum vulgare ssp. vulgare Share Some VOCs with an Antibacterial Activity.	Polito G, Semenzato G, Del Duca S, Castronovo LM, Vassallo A, Chioccioli S, Borsetti D, Calabretta V, Puglia AM, Fani R, Palumbo Piccionello A.	Microorganisms	10.3390/microorganisms10071424	2022
Metabolism	Comparative genomic analysis of Paenibacillus sp. SSG-1 and its closely related strains reveals the effect of glycometabolism on environmental adaptation.	Xu H, Qin S, Lan Y, Liu M, Cao X, Qiao D, Cao Y, Cao Y.	Sci Rep	10.1038/s41598-017-06160-9	2017
Enzymology	The critical roles of propanethiol oxidoreductase and sulfide-quinone oxidoreductase in the propanethiol catabolism pathway in Pseudomonas putida S-1.	Qiao P, Ning L, Chen J, Tang Y, Zhao R, Chen G, Ye Q, Zhou T, Chen J, Zhong W.	Appl Environ Microbiol	10.1128/aem.01959-23	2024
	Prevalence, diversity and applications potential of nodules endophytic bacteria: a systematic review.	Hnini M, Aurag J.	Front Microbiol	10.3389/fmicb.2024.1386742	2024
	Methanol bioconversion into C3, C4, and C5 platform chemicals by the yeast Ogataea polymorpha.	Wefelmeier K, Schmitz S, Kosters BJ, Liebal UW, Blank LM.	Microb Cell Fact	10.1186/s12934-023-02283-z	2024
Metabolism	Nonribosomal biosynthesis of fusaricidins by Paenibacillus polymyxa PKB1 involves direct activation of a D-amino acid.	Li J, Jensen SE.	Chem Biol	10.1016/j.chembiol.2007.12.014	2008
Metabolism	Citrinin, a mycotoxin from Penicillium citrinum, plays a role in inducing motility of Paenibacillus polymyxa.	Park SY, Kim R, Ryu CM, Choi SK, Lee CH, Kim JG, Park SH.	FEMS Microbiol Ecol	10.1111/j.1574-6941.2008.00492.x	2008
Metabolism	The 184th residue of beta-glucosidase Bgl1B plays an important role in glucose tolerance.	Liu J, Zhang X, Fang Z, Fang W, Peng H, Xiao Y.	J Biosci Bioeng	10.1016/j.jbiosc.2011.07.017	2011
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Genetics	Molecular dynamics and simulation analysis against superoxide dismutase (SOD) target of Micrococcus luteus with secondary metabolites from Bacillus licheniformis recognized by genome mining approach.	Bagewadi ZK, Yunus Khan TM, Gangadharappa B, Kamalapurkar A, Mohamed Shamsudeen S, Yaraguppi DA.	Saudi J Biol Sci	10.1016/j.sjbs.2023.103753	2023
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Enzymology	Crystal structures of Paenibacillus polymyxa beta-glucosidase B complexes reveal the molecular basis of substrate specificity and give new insights into the catalytic machinery of family I glycosidases.	Isorna P, Polaina J, Latorre-Garcia L, Canada FJ, Gonzalez B, Sanz-Aparicio J.	J Mol Biol	10.1016/j.jmb.2007.05.082	2007
Genetics	Machine learning algorithm to characterize antimicrobial resistance associated with the International Space Station surface microbiome.	Madrigal P, Singh NK, Wood JM, Gaudioso E, Hernandez-Del-Olmo F, Mason CE, Venkateswaran K, Beheshti A.	Microbiome	10.1186/s40168-022-01332-w	2022
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Enzymology	Influence of growth conditions on the production of extracellular proteolytic enzymes in Paenibacillus peoriae NRRL BD-62 and Paenibacillus polymyxa SCE2.	Alvarez VM, von der Weid I, Seldin L, Santos AL.	Lett Appl Microbiol	10.1111/j.1472-765x.2006.02015.x	2006
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Genetics	Wild bees and their nests host Paenibacillus bacteria with functional potential of avail.	Keller A, Brandel A, Becker MC, Balles R, Abdelmohsen UR, Ankenbrand MJ, Sickel W.	Microbiome	10.1186/s40168-018-0614-1	2018
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Transcriptome	Large effect of phosphate-solubilizing bacteria on the growth and gene expression of Salix spp. at low phosphorus levels.	Koczorski P, Furtado BU, Baum C, Weih M, Ingvarsson P, Hulisz P, Hrynkiewicz K.	Front Plant Sci	10.3389/fpls.2023.1218617	2023
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Metabolism	Fast identification of thermostable beta-glucosidase mutants on cellobiose by a novel combinatorial selection/screening approach.	Liu W, Hong J, Bevan DR, Zhang YH.	Biotechnol Bioeng	10.1002/bit.22340	2009
Enzymology	A cel44C-man26A gene of endophytic Paenibacillus polymyxa GS01 has multi-glycosyl hydrolases in two catalytic domains.	Cho KM, Hong SY, Lee SM, Kim YH, Kahng GG, Kim H, Yun HD.	Appl Microbiol Biotechnol	10.1007/s00253-006-0523-2	2006
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Genetics	Development and validation of an rDNA operon based primer walking strategy applicable to de novo bacterial genome finishing.	Eastman AW, Yuan ZC.	Front Microbiol	10.3389/fmicb.2014.00769	2014
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Pathogenicity	Induced resistance by a long-chain bacterial volatile: elicitation of plant systemic defense by a C13 volatile produced by Paenibacillus polymyxa.	Lee B, Farag MA, Park HB, Kloepper JW, Lee SH, Ryu CM.	PLoS One	10.1371/journal.pone.0048744	2012
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Metabolism	Toxinogenic and spoilage potential of aerobic spore-formers isolated from raw milk.	De Jonghe V, Coorevits A, De Block J, Van Coillie E, Grijspeerdt K, Herman L, De Vos P, Heyndrickx M.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2009.11.007	2010
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Phylogeny	A Review of Resistance to Polymyxins and Evolving Mobile Colistin Resistance Gene (mcr) among Pathogens of Clinical Significance.	Shahzad S, Willcox MDP, Rayamajhee B.	Antibiotics (Basel)	10.3390/antibiotics12111597	2023
Metabolism	Influence of rhizobacterial volatiles on the root system architecture and the production and allocation of biomass in the model grass Brachypodium distachyon (L.) P. Beauv.	Delaplace P, Delory BM, Baudson C, Mendaluk-Saunier de Cazenave M, Spaepen S, Varin S, Brostaux Y, du Jardin P.	BMC Plant Biol	10.1186/s12870-015-0585-3	2015
	The nonpathogenic strain of Fusarium oxysporum FO12 induces Fe deficiency responses in cucumber (Cucumis sativus L.) plants.	Aparicio MA, Lucena C, Garcia MJ, Ruiz-Castilla FJ, Jimenez-Adrian P, Lopez-Berges MS, Prieto P, Alcantara E, Perez-Vicente R, Ramos J, Romera FJ.	Planta	10.1007/s00425-023-04079-2	2023
Enzymology	Phenotypic and genetic diversity of rice seed-associated bacteria and their role in pathogenicity and biological control.	Cottyn B, Debode J, Regalado E, Mew TW, Swings J.	J Appl Microbiol	10.1111/j.1365-2672.2009.04268.x	2009
	In Vitro Activity of MRX-8 and Comparators Against Clinical Isolated Gram-Negative Bacilli in China.	Wu S, Yin D, Zhi P, Guo Y, Yang Y, Zhu D, Hu F.	Front Cell Infect Microbiol	10.3389/fcimb.2022.829592	2022
Enzymology	Structure of gentlyase, the neutral metalloprotease of Paenibacillus polymyxa.	Ruf A, Stihle M, Benz J, Schmidt M, Sobek H.	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444912041169	2013
Genetics	Paenibacillus larvae bacteriophages: obscure past, promising future.	Tsourkas PK.	Microb Genom	10.1099/mgen.0.000329	2020
	Endophytic bacteria from in vitro culture of Leucojum aestivum L. a new source of galanthamine and elicitor of alkaloid biosynthesis.	Ptak A, Moranska E, Warchol M, Gurgul A, Skrzypek E, Dziurka M, Laurain-Mattar D, Spina R, Jaglarz A, Simlat M.	Sci Rep	10.1038/s41598-022-17992-5	2022
Metabolism	Bioconversion of wastewater from sweet potato starch production to Paenibacillus polymyxa biofertilizer for tea plants.	Xu S, Bai Z, Jin B, Xiao R, Zhuang G.	Sci Rep	10.1038/srep04131	2014
	Characterization of Two alpha-l-Arabinofuranosidases from Acetivibrio mesophilus and Their Synergistic Effect in Degradation of Arabinose-Containing Substrates.	Liu Y, Vanderhaeghen S, Feiler W, Angelov A, Baudrexl M, Zverlov V, Liebl W.	Microorganisms	10.3390/microorganisms9071467	2021
	Diversity of Fast-Growth Spore-Forming Microbes and Their Activity as Plant Partners.	Artigas Ramirez MD, Agake SI, Maeda M, Kojima K, Ohkama-Ohtsu N, Yokoyama T.	Microorganisms	10.3390/microorganisms11020232	2023
	Hordeum vulgare differentiates its response to beneficial bacteria.	Duan Y, Han M, Grimm M, Schierstaedt J, Imani J, Cardinale M, Le Jean M, Nesme J, Sorensen SJ, Schikora A.	BMC Plant Biol	10.1186/s12870-023-04484-5	2023
Metabolism	Biocatalytic synthesis of lactosucrose using a recombinant thermostable beta-fructofuranosidase from Arthrobacter sp. 10138.	Chen C, Deng J, Lv X, Li J, Du G, Li H, Liu L.	Bioengineered	10.1080/21655979.2020.1739404	2020
Metabolism	Lactosucrose bioconversion from lactose and sucrose by whole cells of Paenibacillus polymyxa harboring levansucrase activity.	Choi HJ, Kim CS, Kim P, Jung HC, Oh DK.	Biotechnol Prog	10.1021/bp049770v	2004
	Effect of disease severity on the structure and diversity of the phyllosphere microbial community in tobacco.	Sun M, Shi C, Huang Y, Wang H, Li J, Cai L, Luo F, Xiang L, Wang F.	Front Microbiol	10.3389/fmicb.2022.1081576	2022
	Replacing conventional decontamination of hatching eggs with a natural defense strategy based on antimicrobial, volatile pyrazines.	Kusstatscher P, Cernava T, Liebminger S, Berg G.	Sci Rep	10.1038/s41598-017-13579-7	2017
Metabolism	Airborne Bacterial Interactions: Functions Out of Thin Air?	Audrain B, Letoffe S, Ghigo JM.	Front Microbiol	10.3389/fmicb.2015.01476	2015
Enzymology	Isolation and identification of an endophytic strain EJS-3 producing novel fibrinolytic enzymes.	Lu F, Sun L, Lu Z, Bie X, Fang Y, Liu S.	Curr Microbiol	10.1007/s00284-006-0591-7	2007
	An update on novel taxa and revised taxonomic status of bacteria isolated from aquatic host species described in 2022-2023.	Burbick CR, Lawhon SD, Bukouras B, Lazzerini G, Munson E.	J Clin Microbiol	10.1128/jcm.01043-24	2024
	Fermentation and kinetics characteristics of a bioflocculant from potato starch wastewater and its application.	Guo J, Liu J, Yang Y, Zhou Y, Jiang S, Chen C.	Sci Rep	10.1038/s41598-018-21796-x	2018
	Cyclic Isothiocyanate Goitrin Impairs Lotus japonicus Nodulation, Affects the Proteomes of Nodules and Free Mesorhizobium loti, and Induces the Formation of Caffeic Acid Derivatives in Bacterial Cultures.	Jeong S, Schutz V, Demir F, Preusche M, Huesgen P, Bigler L, Kovacic F, Gutbrod K, Dormann P, Schulz M.	Plants (Basel)	10.3390/plants13202897	2024
Enzymology	Isolation of an antifungal Paenibacillus strain HT16 from locusts and purification of its medium-dependent antagonistic component.	Zhou WW, Huang JX, Niu TG.	J Appl Microbiol	10.1111/j.1365-2672.2008.03822.x	2008
Genetics	Epilithic Biofilms in Lake Baikal: Screening and Diversity of PKS and NRPS Genes in the Genomes of Heterotrophic Bacteria.	Sukhanova E, Zimens E, Kaluzhnaya O, Parfenova V, Belykh O.	Pol J Microbiol	10.21307/pjm-2018-060	2018
	Impact of Fungal Hyphae on Growth and Dispersal of Obligate Anaerobic Bacteria in Aerated Habitats.	Xiong BJ, Kleinsteuber S, Strauber H, Dusny C, Harms H, Wick LY.	mBio	10.1128/mbio.00769-22	2022
Enzymology	Isolation and analysis of bacteria associated with spores of Gigaspora margarita.	Cruz AF, Horii S, Ochiai S, Yasuda A, Ishii T.	J Appl Microbiol	10.1111/j.1365-2672.2007.03695.x	2008
	Molecular Crowding Alters the Interactions of Polymyxin Lipopeptides within the Periplasm of E. coli: Insights from Molecular Dynamics.	Smith IPS, Pedebos C, Khalid S.	J Phys Chem B	10.1021/acs.jpcb.3c07985	2024
	Paenibacillus polymyxa purified bacteriocin to control Campylobacter jejuni in chickens.	Stern NJ, Svetoch EA, Eruslanov BV, Kovalev YN, Volodina LI, Perelygin VV, Mitsevich EV, Mitsevich IP, Levchuk VP.	J Food Prot	10.4315/0362-028x-68.7.1450	2005
Metabolism	Use of metabolic and molecular methods for the identification of a Bacillus strain isolated from paper affected by foxing.	De Paolis MR, Lippi D.	Microbiol Res	10.1016/j.micres.2007.06.002	2008
	Intercropping with Achyranthes bidentata alleviates Rehmannia glutinosa consecutive monoculture problem by reestablishing rhizosphere microenvironment.	Liu Y, Liu Y, Zeng C, Wang J, Nyimbo WJ, Jiao Y, Wu L, Chen T, Fang C, Lin W.	Front Plant Sci	10.3389/fpls.2022.1041561	2022
	Microbiome Modulation-Toward a Better Understanding of Plant Microbiome Response to Microbial Inoculants.	Berg G, Kusstatscher P, Abdelfattah A, Cernava T, Smalla K.	Front Microbiol	10.3389/fmicb.2021.650610	2021
Stress	Role of Bacillus spp. in antagonism between Pleurotus ostreatus and Trichoderma harzianum in heat-treated wheat-straw substrates.	Velazquez-Cedeno M, Farnet AM, Mata G, Savoie JM.	Bioresour Technol	10.1016/j.biortech.2008.01.022	2008
Metabolism	Metabolic analysis of acetate accumulation during xylose consumption by Paenibacillus polymyxa.	Marwoto B, Nakashimada Y, Kakizono T, Nishio N.	Appl Microbiol Biotechnol	10.1007/s00253-003-1435-z	2004
Enzymology	[Purification and cloning of an antifungal protein from the rice diseases controlling bacterial strain Paenibacillus polymyxa WY110].	Yao WL, Wang YS, Han JG, Li LB, Song W.	Yi Chuan Xue Bao		2004
	Ecology and biotechnological potential of Paenibacillus polymyxa: a minireview.	Lal S, Tabacchioni S.	Indian J Microbiol	10.1007/s12088-009-0008-y	2009
Enzymology	Bee Pollen and Bee Bread as a Source of Bacteria Producing Antimicrobials.	Pelka K, Pelka K, Worobo RW, Walkusz J, Szweda P.	Antibiotics (Basel)	10.3390/antibiotics10060713	2021
	Novel Chronic Wound Healing by Anti-biofilm Peptides and Protease.	Ghoreishi FS, Roghanian R, Emtiazi G.	Adv Pharm Bull	10.34172/apb.2022.047	2022
	An agroecological structure model of compost-soil-plant interactions for sustainable organic farming.	Miyamoto H, Shigeta K, Suda W, Ichihashi Y, Nihei N, Matsuura M, Tsuboi A, Tominaga N, Aono M, Sato M, Taguchi S, Nakaguma T, Tsuji N, Ishii C, Matsushita T, Shindo C, Ito T, Kato T, Kurotani A, Shima H, Moriya S, Wada S, Horiuchi S, Satoh T, Mori K, Nishiuchi T, Miyamoto H, Kodama H, Hattori M, Ohno H, Kikuchi J, Hirai MY.	ISME Commun	10.1038/s43705-023-00233-9	2023
	Biocontrol of plant parasitic nematodes by bacteria and fungi: a multi-omics approach for the exploration of novel nematicides in sustainable agriculture.	Ayaz M, Zhao JT, Zhao W, Chi YK, Ali Q, Ali F, Khan AR, Yu Q, Yu JW, Wu WC, Qi RD, Huang WK.	Front Microbiol	10.3389/fmicb.2024.1433716	2024
Metabolism	Impact of Module-X2 and Carbohydrate Binding Module-3 on the catalytic activity of associated glycoside hydrolases towards plant biomass.	Pasari N, Adlakha N, Gupta M, Bashir Z, Rajacharya GH, Verma G, Munde M, Bhatnagar R, Yazdani SS.	Sci Rep	10.1038/s41598-017-03927-y	2017
	Allelic diversity uncovers protein domains contributing to the emergence of antimicrobial resistance.	Grant TA, Lopez-Perez M, Haro-Moreno JM, Almagro-Moreno S.	PLoS Genet	10.1371/journal.pgen.1010490	2023
	Maize-soybean relay strip intercropping reshapes the rhizosphere bacterial community and recruits beneficial bacteria to suppress Fusarium root rot of soybean.	Chang X, Wei D, Zeng Y, Zhao X, Hu Y, Wu X, Song C, Gong G, Chen H, Yang C, Zhang M, Liu T, Chen W, Yang W.	Front Microbiol	10.3389/fmicb.2022.1009689	2022
Enzymology	Mechanism of imidazole inhibition of a GH1 beta-glucosidase.	Chagas RS, Otsuka FAM, Pineda MAR, Salinas RK, Marana SR.	FEBS Open Bio	10.1002/2211-5463.13595	2023
	Antibiotic polymyxin arranges lipopolysaccharide into crystalline structures to solidify the bacterial membrane.	Manioglu S, Modaresi SM, Ritzmann N, Thoma J, Overall SA, Harms A, Upert G, Luther A, Barnes AB, Obrecht D, Muller DJ, Hiller S.	Nat Commun	10.1038/s41467-022-33838-0	2022
Pathogenicity	Identification and Characterization of Nematicidal Volatile Organic Compounds from Deep-Sea Virgibacillus dokdonensis MCCC 1A00493.	Huang D, Yu C, Shao Z, Cai M, Li G, Zheng L, Yu Z, Zhang J.	Molecules	10.3390/molecules25030744	2020
Enzymology	Biological role of lectins from the nitrogen-fixing Paenibacillus polymyxa strain 1460 during bacterial-plant-root interactions.	Karpunina LV, Mel'nikova UY, Konnova SA.	Curr Microbiol	10.1007/s00284-002-3987-z	2003
	Can Grafting Manage Fusarium Wilt Disease of Cucumber and Increase Productivity under Heat Stress?	Shalaby TA, Taha NA, Rakha MT, El-Beltagi HS, Shehata WF, Ramadan KMA, El-Ramady H, Bayoumi YA.	Plants (Basel)	10.3390/plants11091147	2022
	Proteomic Analysis Reveals the Positive Roles of the Plant-Growth-Promoting Rhizobacterium NSY50 in the Response of Cucumber Roots to Fusarium oxysporum f. sp. cucumerinum Inoculation.	Du N, Shi L, Yuan Y, Li B, Shu S, Sun J, Guo S.	Front Plant Sci	10.3389/fpls.2016.01859	2016
	A Systematic Review of Pharmacokinetic Studies of Colistin and Polymyxin B in Adult Populations.	Zamri PJ, Lim SMS, Sime FB, Roberts JA, Abdul-Aziz MH.	Clin Pharmacokinet	10.1007/s40262-025-01488-2	2025
	Screening and evaluation of probiotics as a biocontrol agent against pathogenic Vibrios in marine aquaculture.	Ravi AV, Musthafa KS, Jegathammbal G, Kathiresan K, Pandian SK.	Lett Appl Microbiol	10.1111/j.1472-765x.2007.02180.x	2007
	"An apple a day keeps the doctor away": The potentials of apple bioactive constituents for chronic disease prevention.	Oyenihi AB, Belay ZA, Mditshwa A, Caleb OJ.	J Food Sci	10.1111/1750-3841.16155	2022
	Characterization of a novel cysteine-less Cu/Zn-superoxide dismutase in Paenibacillus lautus missing a conserved disulfide bond.	Furukawa Y, Shintani A, Narikiyo S, Sue K, Akutsu M, Muraki N.	J Biol Chem	10.1016/j.jbc.2023.105040	2023
Phylogeny	[A case of Paenibacillus polymyxa bacteremia in a patient with cerebral infarction].	Nasu Y, Nosaka Y, Otsuka Y, Tsuruga T, Nakajima M, Watanabe Y, Jin M.	Kansenshogaku Zasshi	10.11150/kansenshogakuzasshi1970.77.844	2003
Phylogeny	Isolation and identification of a new biocontrol bacteria against Salvia miltiorrhiza root rot and optimization of culture conditions for antifungal substance production using response surface methodology.	Sa R, He S, Han D, Liu M, Yu Y, Shang R, Song M.	BMC Microbiol	10.1186/s12866-022-02628-5	2022
Enzymology	Isolation of Bacillus circulans and Paenibacillus polymyxa strains inhibitory to Campylobacter jejuni and characterization of associated bacteriocins.	Svetoch EA, Stern NJ, Eruslanov BV, Kovalev YN, Volodina LI, Perelygin VV, Mitsevich EV, Mitsevich IP, Pokhilenko VD, Borzenkov VN, Levchuk VP, Svetoch OE, Kudriavtseva TY.	J Food Prot	10.4315/0362-028x-68.1.11	2005
	Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park.	Mead DA, Lucas S, Copeland A, Lapidus A, Cheng JF, Bruce DC, Goodwin LA, Pitluck S, Chertkov O, Zhang X, Detter JC, Han CS, Tapia R, Land M, Hauser LJ, Chang YJ, Kyrpides NC, Ivanova NN, Ovchinnikova G, Woyke T, Brumm C, Hochstein R, Schoenfeld T, Brumm P.	Stand Genomic Sci	10.4056/sigs.2605792	2012
Genetics	Genome sequencing and analysis of Bacillus velezensis VJH504 reveal biocontrol mechanism against cucumber Fusarium wilt.	Yang F, Jiang H, Ma K, Wang X, Liang S, Cai Y, Jing Y, Tian B, Shi X.	Front Microbiol	10.3389/fmicb.2023.1279695	2023
Pathogenicity	Should the biofilm mode of life be taken into consideration for microbial biocontrol agents?	Pandin C, Le Coq D, Canette A, Aymerich S, Briandet R.	Microb Biotechnol	10.1111/1751-7915.12693	2017
Phylogeny	Analysis of microbial diversity in Shenqu with different fermentation times by PCR-DGGE.	Liu T, Jia T, Chen J, Liu X, Zhao M, Liu P.	Braz J Microbiol	10.1016/j.bjm.2017.01.002	2017
Enzymology	Chinese consensus guidelines for therapeutic drug monitoring of polymyxin B, endorsed by the Infection and Chemotherapy Committee of the Shanghai Medical Association and the Therapeutic Drug Monitoring Committee of the Chinese Pharmacological Society.	Liu X, Huang C, Bergen PJ, Li J, Zhang J, Chen Y, Chen Y, Guo B, Hu F, Hu J, Hu L, Li X, Qiu H, Shao H, Sun T, Wang Y, Xu P, Yang J, Yang Y, Yu Z, Zhang B, Zhu H, Zuo X, Zhang Y, Miao L, Zhang J.	J Zhejiang Univ Sci B	10.1631/jzus.b2200466	2023
Biotechnology	The fate of plant growth-promoting rhizobacteria in soilless agriculture: future perspectives.	Azizoglu U, Yilmaz N, Simsek O, Ibal JC, Tagele SB, Shin JH.	3 Biotech	10.1007/s13205-021-02941-2	2021
Metabolism	Novel pyrazine metabolites found in polymyxin biosynthesis by Paenibacillus polymyxa.	Beck HC, Hansen AM, Lauritsen FR.	FEMS Microbiol Lett	10.1016/s0378-1097(03)00054-5	2003
Metabolism	Structural insights into rice BGlu1 beta-glucosidase oligosaccharide hydrolysis and transglycosylation.	Chuenchor W, Pengthaisong S, Robinson RC, Yuvaniyama J, Oonanant W, Bevan DR, Esen A, Chen CJ, Opassiri R, Svasti J, Cairns JR.	J Mol Biol	10.1016/j.jmb.2008.01.076	2008
	Characterization of culturable bacterial endophytes and their capacity to promote plant growth from plants grown using organic or conventional practices.	Xia Y, DeBolt S, Dreyer J, Scott D, Williams MA.	Front Plant Sci	10.3389/fpls.2015.00490	2015
	Culture conditions for flocculant production by Paenibacillus polymyxa BY-28.	Gong XY, Luan ZK, Pei YS, Wang SG.	J Environ Sci Health A Tox Hazard Subst Environ Eng	10.1081/ese-120016931	2003
	Biocontrol of Meloidogyne javanica by Rhizobium and plant growth-promoting rhizobacteria on lentil	Siddiqui ZA, Baghel G, Akhtar MS.	World J Microbiol Biotechnol	10.1007/s11274-006-9244-z	2007
	Optimization of nickel and cobalt biosorption by native Serratia marcescens strains isolated from serpentine deposits using response surface methodology.	Diaz A, Marrero J, Cabrera G, Coto O, Gomez JM.	Environ Monit Assess	10.1007/s10661-022-09816-w	2022
Phylogeny	Pearl Millet Genetic Traits Shape Rhizobacterial Diversity and Modulate Rhizosphere Aggregation.	Ndour PMS, Gueye M, Barakat M, Ortet P, Bertrand-Huleux M, Pablo AL, Dezette D, Chapuis-Lardy L, Assigbetse K, Kane NA, Vigouroux Y, Achouak W, Ndoye I, Heulin T, Cournac L.	Front Plant Sci	10.3389/fpls.2017.01288	2017
	Growth promotion of plants by plant growth-promoting rhizobacteria under greenhouse and two different field soil conditions	Cakmakci R, Donmez F, Aydin A, Sahin F.	Soil Biol Biochem	10.1016/j.soilbio.2005.09.019	2006
	Evidence for a novel domain of bacterial outer membrane ushers.	Capitani G, Eidam O, Grutter MG.	Proteins	10.1002/prot.21147	2006
	Isolation, Identification, and Antibacterial Mechanisms of Bacillus amyloliquefaciens QSB-6 and Its Effect on Plant Roots.	Duan Y, Chen R, Zhang R, Jiang W, Chen X, Yin C, Mao Z.	Front Microbiol	10.3389/fmicb.2021.746799	2021
	Epiphytic Yeasts and Bacteria as Candidate Biocontrol Agents of Green and Blue Molds of Citrus Fruits.	Hammami R, Oueslati M, Smiri M, Nefzi S, Ruissi M, Comitini F, Romanazzi G, Cacciola SO, Sadfi Zouaoui N.	J Fungi (Basel)	10.3390/jof8080818	2022
Metabolism	MetA is a "thermal fuse" that inhibits growth and protects Escherichia coli at elevated temperatures.	Schink SJ, Gough Z, Biselli E, Huiman MG, Chang YF, Basan M, Gerland U.	Cell Rep	10.1016/j.celrep.2022.111290	2022
Pathogenicity	Polymyxin P is the active principle in suppressing phytopathogenic Erwinia spp. by the biocontrol rhizobacterium Paenibacillus polymyxa M-1.	Niu B, Vater J, Rueckert C, Blom J, Lehmann M, Ru JJ, Chen XH, Wang Q, Borriss R.	BMC Microbiol	10.1186/1471-2180-13-137	2013
Pathogenicity	Efficacy of enterocin AS-48 against bacilli in ready-to-eat vegetable soups and purees.	Grande MJ, Abriouel H, Lucas Lopez R, Valdivia E, Ben Omar N, Martinez-Canamero M, Galvez A.	J Food Prot	10.4315/0362-028x-70.10.2339	2007
Pathogenicity	Compartment Niche Shapes the Assembly and Network of Cannabis sativa-Associated Microbiome.	Wei G, Ning K, Zhang G, Yu H, Yang S, Dai F, Dong L, Chen S.	Front Microbiol	10.3389/fmicb.2021.714993	2021
	Application of Rhizobacteria for Plant Growth Promotion Effect and Biocontrol of Anthracnose Caused by Colletotrichum acutatum on Pepper.	Lamsal K, Kim SW, Kim YS, Lee YS.	Mycobiology	10.5941/myco.2012.40.4.244	2012
Enzymology	The Effect of Cultivation Conditions on Antifungal and Maize Seed Germination Activity of Bacillus-Based Biocontrol Agent.	Vlajkov V, Pajcin I, Loc M, Budakov D, Dodic J, Grahovac M, Grahovac J.	Bioengineering (Basel)	10.3390/bioengineering9120797	2022
	Biological Control Efficacy and Action Mechanism of Klebsiella pneumoniae JCK-2201 Producing Meso-2,3-Butanediol Against Tomato Bacterial Wilt.	Kim B, Park AR, Song CW, Song H, Kim JC.	Front Microbiol	10.3389/fmicb.2022.914589	2022
	Functional and molecular characterization of plant growth promoting Bacillus isolates from tomato rhizosphere.	Kalam S, Basu A, Podile AR.	Heliyon	10.1016/j.heliyon.2020.e04734	2020
Genetics	Mining the phytomicrobiome to understand how bacterial coinoculations enhance plant growth.	Maymon M, Martinez-Hidalgo P, Tran SS, Ice T, Craemer K, Anbarchian T, Sung T, Hwang LH, Chou M, Fujishige NA, Villella W, Ventosa J, Sikorski J, Sanders ER, Faull KF, Hirsch AM.	Front Plant Sci	10.3389/fpls.2015.00784	2015
	Potential plant benefits of endophytic microorganisms associated with halophyte Glycyrrhiza glabra L.	Mardonova G, Shurigin V, Eshboev F, Egamberdieva D.	AIMS Microbiol	10.3934/microbiol.2024037	2024
	Diversity and Exploration of Endophytic Bacilli for the Management of Head Scab (Fusarium graminearum) of Wheat.	Kaul N, Kashyap PL, Kumar S, Singh D, Singh GP.	Pathogens	10.3390/pathogens11101088	2022
	Noncontiguous finished genome sequences and descriptions of 'Paenibacillus bouchesdurhonensis,' 'Paenibacillus rubinfantis,' 'Paenibacillus senegalimassiliensis' and 'Paenibacillus tuaregi' identified by culturomics.	Pham TP, Tidjani Alou M, Traore SI, Brah S, Ali Diallo B, Diallo A, Sokhna C, Baptiste E, Levasseur A, Fournier PE, Cadoret F, Raoult D.	New Microbes New Infect	10.1016/j.nmni.2017.07.004	2017
	Bacterial diversity obtained by culturable approaches in the gut of Glossina pallidipes population from a non sleeping sickness focus in Tanzania: preliminary results.	Malele I, Nyingilili H, Lyaruu E, Tauzin M, Bernard Ollivier B, Cayol JL, Fardeau ML, Geiger A.	BMC Microbiol	10.1186/s12866-018-1288-3	2018
Biotechnology	Bacillales: From Taxonomy to Biotechnological and Industrial Perspectives.	Harirchi S, Sar T, Ramezani M, Aliyu H, Etemadifar Z, Nojoumi SA, Yazdian F, Awasthi MK, Taherzadeh MJ.	Microorganisms	10.3390/microorganisms10122355	2022
Metabolism	Analysis of Xylose Operon from Paenibacillus polymyxa ATCC842 and Development of Tools for Gene Expression.	Wang Z, Fang Y, Shi Y, Xin Y, Gu Z, Yang T, Li Y, Ding Z, Shi G, Zhang L	Int J Mol Sci	10.3390/ijms23095024	2022
Metabolism	Antifungal Activity of Biocontrol Agents In Vitro and Potential Application to Reduce Mycotoxins (Aflatoxin B1 and Ochratoxin A).	Illueca F, Vila-Donat P, Calpe J, Luz C, Meca G, Quiles JM	Toxins (Basel)	10.3390/toxins13110752	2021
	A Type I Restriction Modification System Influences Genomic Evolution Driven by Horizontal Gene Transfer in Paenibacillus polymyxa.	Chen Z, Shen M, Mao C, Wang C, Yuan P, Wang T, Sun D	Front Microbiol	10.3389/fmicb.2021.709571	2021
Genetics	Peptide-based quorum sensing systems in Paenibacillus polymyxa.	Voichek M, Maass S, Kroniger T, Becher D, Sorek R	Life Sci Alliance	10.26508/lsa.202000847	2020
Phylogeny	Genome-based reclassification of Paenibacillus jamilae Aguilera et al. 2001 as a later heterotypic synonym of Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994.	Kwak MJ, Choi SB, Ha SM, Kim EH, Kim BY, Chun J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004140	2020
Metabolism	Unraveling the subtleties of beta-(1-->3)-glucan phosphorylase specificity in the GH94, GH149, and GH161 glycoside hydrolase families.	Kuhaudomlarp S, Pergolizzi G, Patron NJ, Henrissat B, Field RA	J Biol Chem	10.1074/jbc.RA119.007712	2019
Pathogenicity	Enhanced NADH Metabolism Involves Colistin-Induced Killing of Bacillus subtilis and Paenibacillus polymyxa.	Yu Z, Zhu Y, Fu J, Qiu J, Yin J	Molecules	10.3390/molecules24030387	2019
	Benzotriazole-Mediated Synthesis and Antibacterial Activity of Novel N-Acylcephalexins.	Agha KA, Abo-Dya NE, Ibrahim TS, Abdel-Aal EH, Hegazy WA	Sci Pharm	10.3390/scipharm84030484	2016
Enzymology	Antibacterial, antifungal and antioxidant activities of the ethanol extract of the stem bark of Clausena heptaphylla.	Fakruddin M, Mannan KS, Mazumdar RM, Afroz H	BMC Complement Altern Med	10.1186/1472-6882-12-232	2012
Genetics	Draft genome sequence of the Paenibacillus polymyxa type strain (ATCC 842T), a plant growth-promoting bacterium.	Jeong H, Park SY, Chung WH, Kim SH, Kim N, Park SH, Kim JF	J Bacteriol	10.1128/JB.05447-11	2011
Phylogeny	Identification and application of AFLP-derived genetic markers for quantitative PCR-based tracking of Bacillus and Paenibacillus spp. released in soil.	Providenti MA, Begin M, Hynes S, Lamarche C, Chitty D, Hahn J, Beaudette LA, Scroggins R, Smith ML	Can J Microbiol	10.1139/w09-071	2009
Phylogeny	Auxin production and detection of the gene coding for the Auxin Efflux Carrier (AEC) protein in Paenibacillus polymyxa.	Da Mota FF, Gomes EA, Seldin L	J Microbiol	10.1007/s12275-007-0245-x	2008
Enzymology	Expression and secretion of Bacillus polymyxa neopullulanase in Saccharomyces cerevisiae.	Yebra MJ, Blasco A, Sanz P	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb13353.x	1999
Biotechnology	Production of l-Phenylalanine from Starch by Analog-Resistant Mutants of Bacillus polymyxa.	Shetty K, Crawford DL, Pometto AL	Appl Environ Microbiol	10.1128/aem.52.4.637-643.1986	1986
Phylogeny	Neobacillus driksii sp. nov. isolated from a Mars 2020 spacecraft assembly facility and genomic potential for lasso peptide production in Neobacillus.	Hameed A, McDonagh F, Sengupta P, Miliotis G, Sivabalan SKM, Szydlowski L, Simpson A, Singh NK, Rekha PD, Raman K, Venkateswaran K.	Microbiol Spectr	10.1128/spectrum.01376-24	2025
Phylogeny	Paenibacillus fonticola sp. nov., isolated from a warm spring.	Chou JH, Chou YJ, Lin KY, Sheu SY, Sheu DS, Arun AB, Young CC, Chen WM.	Int J Syst Evol Microbiol	10.1099/ijs.0.64872-0	2007
Phylogeny	Description of Cohnella rhizoplanae sp. nov., isolated from the root surface of soybean (Glycine max).	Kampfer P, Glaeser SP, McInroy JA, Busse HJ, Clermont D, Criscuolo A.	Antonie Van Leeuwenhoek	10.1007/s10482-024-02051-y	2024
Genetics	Paenibacillus allorhizoplanae sp. nov. from the rhizoplane of a Zea mays root.	Kampfer P, Lipski A, Lamothe L, Clermont D, Criscuolo A, McInroy JA, Glaeser SP.	Arch Microbiol	10.1007/s00203-022-03225-w	2022
Phylogeny	A Novel Carotenoid-Producing Bacterium, Paenibacillus aurantius sp. nov., Isolated from Korean Marine Environment.	Hwang CY, Seo SM, Cho ES, Nam YD, Park SL, Lim SI, Seo MJ.	Microorganisms	10.3390/microorganisms11112719	2023
Genetics	Paenibacillus phocaensis sp. nov., isolated from the gut microbiota of a healthy infant.	Tidjani Alou M, Rathored J, Nguyen TT, Andrieu C, Couderc C, Brah S, Diallo BA, Fournier PE, Raoult D, Dubourg G.	New Microbes New Infect	10.1016/j.nmni.2016.12.001	2017
	Novel spore-forming species exhibiting intrinsic resistance to third- and fourth-generation cephalosporins and description of Tigheibacillus jepli gen. nov., sp. nov.	Miliotis G, Sengupta P, Hameed A, Chuvochina M, McDonagh F, Simpson AC, Parker CW, Singh NK, Rekha PD, Morris D, Raman K, Kyrpides NC, Hugenholtz P, Venkateswaran K.	mBio	10.1128/mbio.00181-24	2024
Phylogeny	Paenibacillus chartarius sp. nov., isolated from a paper mill.	Kampfer P, Falsen E, Lodders N, Martin K, Kassmannhuber J, Busse HJ.	Int J Syst Evol Microbiol	10.1099/ijs.0.035154-0	2012
Phylogeny	Fontibacillus aquaticus gen. nov., sp. nov., isolated from a warm spring.	Saha P, Krishnamurthi S, Bhattacharya A, Sharma R, Chakrabarti T.	Int J Syst Evol Microbiol	10.1099/ijs.0.012633-0	2010
Genetics	Comparative genomic analysis of Cohnella hashimotonis sp. nov. isolated from the International Space Station.	Simpson AC, Eedara VVR, Singh NK, Damle N, Parker CW, Karouia F, Mason CE, Venkateswaran K.	Front Microbiol	10.3389/fmicb.2023.1166013	2023
Phylogeny	Paenibacillus farraposensis sp. nov., isolated from a root nodule of Arachis villosa.	Roldan DM, Costa A, Kralova S, Busse HJ, Amarelle V, Fabiano E, Menes RJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.005294	2022
Phylogeny	Paenibacillus ottowii sp. nov. isolated from a fermentation system processing bovine manure.	Velazquez LF, Rajbanshi S, Guan S, Hinchee M, Welsh A	Int J Syst Evol Microbiol	10.1099/ijsem.0.003672	2020
Phylogeny	Paenibacillus bovis sp. nov., isolated from raw yak (Bos grunniens) milk.	Gao C, Han J, Liu Z, Xu X, Hang F, Wu Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.000900	2016
Phylogeny	Paenibacillus kyungheensis sp. nov., isolated from flowers of magnolia.	Siddiqi MZ, Siddiqi MH, Im WT, Kim YJ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijsem.0.000521	2015
Phylogeny	Paenibacillus enshidis sp. nov., Isolated from the Nodules of Robinia pseudoacacia L.	Yin J, He D, Li X, Zeng X, Tian M, Cheng G	Curr Microbiol	10.1007/s00284-015-0854-2	2015
Phylogeny	Paenibacillus doosanensis sp. nov., isolated from soil.	Kim JH, Kang H, Kim W	Int J Syst Evol Microbiol	10.1099/ijs.0.050716-0	2014
Phylogeny	Paenibacillus beijingensis sp. nov., a nitrogen-fixing species isolated from wheat rhizosphere soil.	Wang LY, Li J, Li QX, Chen SF	Antonie Van Leeuwenhoek	10.1007/s10482-013-9974-5	2013

References

#2036	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 36
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#37333	; Curators of the CIP;
#44995	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 7426
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#121931	Collection of Institut Pasteur ; Curators of the CIP; CIP 66.22
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus polymyxa (DSM 36, ATCC 842, BUCSAV 162)

Name and taxonomic classification

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Physiology and metabolism

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API coryne

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API biotype100

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