Oceanobacillus oncorhynchi subsp. incaldanensis (DSM 16557, ATCC BAA-954, CIP 109235)

Name: Oceanobacillus oncorhynchi subsp. incaldanensis (DSM 16557, ATCC BAA-954, CIP 109235)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1374

Type strain

Strain Designation 20AG

Culture col. no. DSM 16557 ATCC BAA-954 CIP 109235 20AG

NCBI tax ID(s) 272775

Special Collections DSMZ CIP Literature strains

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Oceanobacillus oncorhynchi subsp. incaldanensis 20AG is an obligate aerobe, moderately halophilic, mesophilic prokaryote that forms circular colonies and was isolated from algal mat collected from a sulfurous spring in the Santa Maria Incaldana site.

Gram-positive motile rod-shaped colony-forming obligate aerobe moderately halophilic mesophilic 16S sequence

Name and taxonomic classification

SI-ID 290988

ATCC BAA-954,DSM 16557,CIP 109235,BCRC 17776

@ref 20215

Last LPSN update 2025-12-16 09:47:05

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Oceanobacillus

Species Oceanobacillus oncorhynchi subsp. incaldanensis

Full scientific name Oceanobacillus oncorhynchi subsp. incaldanensis Romano et al. 2006

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
23031	positive	1.2-2.0 µm	0.5-0.8 µm	rod-shaped		peritrichous
121420	positive			rod-shaped

Colony morphology

@ref	Colony color	Colony shape
23031	beige	circular

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6509	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
37959	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121420	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
6509	positive	growth	30	mesophilic
23031	positive	growth	10.0-40.0
23031	positive	optimum	37.0	mesophilic
23031				mesophilic
37959	positive	growth	37	mesophilic

Culture pH

@ref	Ability	Type	PH
23031	positive	optimum	9.0
23031	positive	growth	6.5-9.5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
23031	obligate aerobe
121420	facultative anaerobe

Spore formation

23031

Spore formationno

Halophily

@ref	Halophily level
23031	moderately halophilic
23031
23031

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
23031		casein	-	hydrolysis
23031	17057 ChEBI	cellobiose	+	carbon source
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
23031	17108 ChEBI	D-arabinose	+	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
23031	15824 ChEBI	D-fructose	+	carbon source
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
23031	12936 ChEBI	D-galactose	+	carbon source
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
23031	17634 ChEBI	D-glucose	+	carbon source
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
23031	16024 ChEBI	D-mannose	+	carbon source
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
23031	16988 ChEBI	D-ribose	+	carbon source
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
23031	17317 ChEBI	D-sorbose	+	carbon source
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
23031	65327 ChEBI	D-xylose	+	carbon source
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	+	builds acid from	from API 50CH acid
23031	5291 ChEBI	gelatin	-	hydrolysis
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
23031	17754 ChEBI	glycerol	+	carbon source
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
23031	17716 ChEBI	lactose	+	carbon source
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
23031	17306 ChEBI	maltose	+	carbon source
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	+	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
23031	17632 ChEBI	nitrate	+	reduction
121420	17632 ChEBI	nitrate	+	reduction
121420	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
23031	32954 ChEBI	sodium acetate	+	carbon source
23031	53258 ChEBI	sodium citrate	+	carbon source
23031	28017 ChEBI	starch	-	hydrolysis
23031	17992 ChEBI	sucrose	+	carbon source
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
23031	27082 ChEBI	trehalose	+	carbon source
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.
23031	28971	ampicillin	25 µg
23031	28669	bacitracin	10 µg
23031	17698	chloramphenicol	10 µg
23031	48923	erythromycin	5 µg
23031	6104	kanamycin
23031	6472	lincomycin	15 µg
23031	28368	novobiocin	30 µg
23031	18208	penicillin g	2 µg
23031	17076	streptomycin	25 µg
23031	27902	tetracycline
23031	27902	tetracycline	50 µg
23031	28001	vancomycin	30 µg

Metabolite production

@ref	Chebi-ID	Metabolite	Production
23031	35581 ChEBI	indole
121420	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
23031	catalase	+	1.11.1.6
121420	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
23031	cytochrome oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121420	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
23031	urease	-	3.5.1.5
121420	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121420	-	-	+	+	-	+	-	-	-	+	+	+	-	-	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
121420	not determinedn.d.	+/-	-	-	+	+	+/-	-	-	+	+	+	+	+	-	-	+	+/-	+	+/-	-	+	+	+	+	+	+	+	+	-	+/-	+	+	-	+/-	+	+/-	-	+/-	+	+	-	+	-	-	+/-	-	+/-	-	+/-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Spring
#Environmental	#Microbial community	#Microbial mat
#Host	#Algae	-
#Condition	#Sulfuric	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture composition
23031	algal mat collected from a sulfurous spring in the Santa Maria Incaldana site	Mondragone, Caserta Province, Campania	Italy	ITA	Europe	enrichment medium	containing (l-1): Na2CO3 , 3.0 g; KCl, 2.0 g; MgSO4.7H2O, 1.0 g; NaCl, 100 g, trisodium citrate, 3.0 g; yeast extract, 10.0 g; MnCl2.4H2O, 0.36 mg; FeSO4 , 50 mg
6509	algal mat	Campania	Italy	ITA	Europe
121420	Algal mat	Mondragone, Campania	Italy	ITA	Europe

Taxonmaps

69479

Global distribution of 16S sequence AJ640134 (>99% sequence identity) for Oceanobacillus from Microbeatlas

Aquatic Samples	49
Soil Samples	127
Animal Samples	222
Plant Samples	81
Total Samples	479

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6509	1	Risk group (German classification) According to TRBA 466
121420	1	Risk group (French classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6509	Oceanobacillus oncorhynchi subsp. incaldanensis partial 16S rRNA gene, type strain 20AGT	AJ640134	1513		272775

GC content

@ref	GC-content (mol%)	Method
23031	40.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Title	Authors	Journal	DOI	Year
Extremophilic Microorganisms for the Green Synthesis of Antibacterial Nanoparticles.	Romano I, Vitiello G, Gallucci N, Di Girolamo R, Cattaneo A, Poli A, Di Donato P.	Microorganisms	10.3390/microorganisms10101885	2022
Oceanobacillus gochujangensis sp. nov., isolated from gochujang a traditional Korean fermented food.	Jang SJ, Kim YJ, Lee SH, Park YS, Park JM, Bai DH	J Microbiol	10.1007/s12275-014-4220-z	2014
Oceanobacillus aidingensis sp. nov., a moderately halophilic bacterium.	Liu W, Yang SS	Antonie Van Leeuwenhoek	10.1007/s10482-014-0128-1	2014
Oceanobacillus neutriphilus sp. nov., isolated from activated sludge in a bioreactor.	Yang JY, Huo YY, Xu XW, Meng FX, Wu M, Wang CS	Int J Syst Evol Microbiol	10.1099/ijs.0.016295-0	2009
Oceanobacillus chironomi sp. nov., a halotolerant and facultatively alkaliphilic species isolated from a chironomid egg mass.	Raats D, Halpern M	Int J Syst Evol Microbiol	10.1099/ijs.0.64502-0	2007
Oceanobacillus oncorhynchi subsp. incaldanensis subsp. nov., an alkalitolerant halophile isolated from an algal mat collected from a sulfurous spring in Campania (Italy), and emended description of Oceanobacillus oncorhynchi.	Romano I, Lama L, Nicolaus B, Poli A, Gambacorta A, Giordano A	Int J Syst Evol Microbiol	10.1099/ijs.0.63575-0	2006

References

#6509	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16557
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23031	Ida Romano,Licia Lama,Barbara Nicolaus,Annarita Poli,Agata Gambacorta,Assunta Giordano: Oceanobacillus oncorhynchi subsp. incaldanensis subsp. nov., an alkalitolerant halophile isolated from an algal mat collected from a sulfurous spring in Campania (Italy), and emended description of Oceanobacillus oncorhynchi. IJSEM 56: 805 - 810 2006 ( DOI 10.1099/ijs.0.63575-0 , PubMed 16585699 )
#37959	; Curators of the CIP;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121420	Collection of Institut Pasteur ; Curators of the CIP; CIP 109235
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Oceanobacillus oncorhynchi subsp. incaldanensis (DSM 16557, ATCC BAA-954, CIP 109235)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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