Oceanobacillus picturae (DSM 14867, LMG 19492, CCUG 54775)

Name: Oceanobacillus picturae (DSM 14867, LMG 19492, CCUG 54775)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1373

Type strain

Strain Designation mccs2171

Culture col. no. DSM 14867 LMG 19492 CCUG 54775 KCTC 3821 mccs2171 1 more

NCBI tax ID(s) 171693

Special Collections DSMZ CCUG KCTC Literature strains CIP

Links

Oceanobacillus picturae mccs2171 is an aerobe, spore-forming, mesophilic prokaryote that was isolated from mural painting.

spore-forming Gram-positive motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 13182

LMG 19492,DSM 14867,KCTC 3821,CIP 108264,CCUG 54775

@ref 20215

Last LPSN update 2025-12-16 09:47:05

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Oceanobacillus

Species Oceanobacillus picturae

Full scientific name Oceanobacillus picturae (Heyrman et al. 2003) Lee et al. 2006

Synonyms (1)

Virgibacillus picturae

BacDive ID	Other strains from **Oceanobacillus picturae** (1)	Type strain
153492	O. picturae CCUG 49744

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Flagellum arrangement
23030	positive	rod-shaped	peritrichous
67771		rod-shaped
67771	positive
121823	positive	rod-shaped

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5586	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
33218	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
121823	CIP Medium 72	Medium recipe at CIP
121823	CIP Medium 13	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5586	positive	growth	28	mesophilic
23030	positive	growth	5.0-42.0
33218	positive	growth	30	mesophilic
60324	positive	growth	30-37	mesophilic
67771	positive	growth	28	mesophilic
121823	positive	growth	22-37
121823	negative	growth	10
121823	negative	growth	45
121823	negative	growth	55

Culture pH

@ref	Ability	Type	PH
121823	positive	growth	6

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
60324	aerobe
67771	aerobe
121823	obligate aerobe

Spore formation

@ref	Spore description	Type of spore	Spore formation
23030	ellipsoidal,subterminal or terminal,in swollen sporangia	spore
121823

Halophily

@ref	Salt	Growth	Tested relation	Concentration
23030	NaCl	positive	growth	0.0-22.0 %(w/v)
121823	NaCl	positive	growth	0-10 %

Observation

67771

Observationquinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
121823	16947 ChEBI	citrate	-	carbon source
121823	4853 ChEBI	esculin	-	hydrolysis
121823	606565 ChEBI	hippurate	+	hydrolysis
121823	17632 ChEBI	nitrate	-	reduction
121823	17632 ChEBI	nitrate	-	respiration
121823	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
121823	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
121823	15688 ChEBI	acetoin	-
121823	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121823	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121823	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
121823	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
121823	caseinase	-	3.4.21.50
23030	catalase	+	1.11.1.6
121823	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
23030	cytochrome oxidase	+	1.9.3.1
121823	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
121823	gamma-glutamyltransferase	+	2.3.2.2
121823	gelatinase	+/-
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
121823	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121823	ornithine decarboxylase	-	4.1.1.17
121823	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
121823	tween esterase	+
121823	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	gluconeogenesis	100	8 of 8
66794	formaldehyde oxidation	100	3 of 3
66794	pentose phosphate pathway	100	11 of 11
66794	vitamin K metabolism	100	5 of 5
66794	teichoic acid biosynthesis	100	1 of 1
66794	ribulose monophosphate pathway	100	2 of 2
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	adipate degradation	100	2 of 2
66794	methylglyoxal degradation	100	5 of 5
66794	acetate fermentation	100	4 of 4
66794	enterobactin biosynthesis	100	3 of 3
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	aspartate and asparagine metabolism	100	9 of 9
66794	palmitate biosynthesis	95.45	21 of 22
66794	propionate fermentation	90	9 of 10
66794	starch degradation	90	9 of 10
66794	threonine metabolism	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	ketogluconate metabolism	87.5	7 of 8
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	leucine metabolism	84.62	11 of 13
66794	vitamin B1 metabolism	84.62	11 of 13
66794	Entner Doudoroff pathway	80	8 of 10
66794	metabolism of amino sugars and derivatives	80	4 of 5
66794	glycine betaine biosynthesis	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	pyrimidine metabolism	80	36 of 45
66794	purine metabolism	78.72	74 of 94
66794	photosynthesis	78.57	11 of 14
66794	heme metabolism	78.57	11 of 14
66794	NAD metabolism	77.78	14 of 18
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	phenylalanine metabolism	76.92	10 of 13
66794	degradation of sugar alcohols	75	12 of 16
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	ppGpp biosynthesis	75	3 of 4
66794	propanol degradation	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	glycolysis	70.59	12 of 17
66794	glutamate and glutamine metabolism	67.86	19 of 28
66794	serine metabolism	66.67	6 of 9
66794	arginine metabolism	66.67	16 of 24
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	cyanate degradation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	citric acid cycle	64.29	9 of 14
66794	proline metabolism	63.64	7 of 11
66794	tryptophan metabolism	63.16	24 of 38
66794	isoleucine metabolism	62.5	5 of 8
66794	alanine metabolism	62.07	18 of 29
66794	histidine metabolism	62.07	18 of 29
66794	urea cycle	61.54	8 of 13
66794	methionine metabolism	61.54	16 of 26
66794	cysteine metabolism	61.11	11 of 18
66794	non-pathway related	60.53	23 of 38
66794	oxidative phosphorylation	60.44	55 of 91
66794	lysine metabolism	59.52	25 of 42
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	glutathione metabolism	57.14	8 of 14
66794	lipid metabolism	54.84	17 of 31
66794	CMP-KDO biosynthesis	50	2 of 4
66794	ethanol fermentation	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	kanosamine biosynthesis II	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
66794	glycogen biosynthesis	50	2 of 4
66794	glycine metabolism	50	5 of 10
66794	phenylmercury acetate degradation	50	1 of 2
66794	quinate degradation	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	selenocysteine biosynthesis	50	3 of 6
66794	tetrahydrofolate metabolism	50	7 of 14
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	isoprenoid biosynthesis	50	13 of 26
66794	cholesterol biosynthesis	45.45	5 of 11
66794	metabolism of disaccharids	45.45	5 of 11
66794	degradation of hexoses	44.44	8 of 18
66794	degradation of sugar acids	44	11 of 25
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	polyamine pathway	43.48	10 of 23
66794	mevalonate metabolism	42.86	3 of 7
66794	ubiquinone biosynthesis	42.86	3 of 7
66794	degradation of pentoses	42.86	12 of 28
66794	cellulose degradation	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	myo-inositol biosynthesis	40	4 of 10
66794	glycogen metabolism	40	2 of 5
66794	phenylacetate degradation (aerobic)	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	ascorbate metabolism	36.36	8 of 22
66794	vitamin B6 metabolism	36.36	4 of 11
66794	tyrosine metabolism	35.71	5 of 14
66794	octane oxidation	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	phosphatidylethanolamine bioynthesis	30.77	4 of 13
66794	sulfate reduction	30.77	4 of 13
66794	4-hydroxyphenylacetate degradation	30	3 of 10
66794	coenzyme M biosynthesis	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	arachidonic acid metabolism	27.78	5 of 18
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	d-xylose degradation	27.27	3 of 11
66794	vitamin B12 metabolism	26.47	9 of 34
66794	carnitine metabolism	25	2 of 8
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	biotin biosynthesis	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	nitrate assimilation	22.22	2 of 9
66794	allantoin degradation	22.22	2 of 9

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121823	-	+	+	-	-	-	-	-	-	-	+	+	-	+	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Built environment	-
#Engineered	#Other	#Painting

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
5586	mural painting	Seville, Carmona	Spain	ESP	Europe
60324	Mural painting		Spain	ESP	Europe
67771	From mural painting	Carmona, Seville	Spain	ESP	Europe
121823	Mural painting		Spain	ESP	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5586	1	Risk group (German classification) According to TRBA 466
121823	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4267860v1 assembly for Oceanobacillus picturae CCUG 54775	contig	GCA_042678605	171693	37.64

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Virgibacillus picturae 16S rRNA gene, type strain LMG 19492T	AJ315060	1516	171693
20218	Virgibacillus picturae partial 16S rRNA gene, isolate OS-221.b	AM237397	1468	171693
124043	Oceanobacillus picturae strain LMG 19492 16S ribosomal RNA gene, partial sequence.	OQ619108	1404	171693

GC content

67771

GC-content (mol%)39.5

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Antibacterial Activities of Bacteria Isolated from the Marine Sponges Isodictya compressa and Higginsia bidentifera Collected from Algoa Bay, South Africa.	Matobole RM, van Zyl LJ, Parker-Nance S, Davies-Coleman MT, Trindade M.	Mar Drugs	10.3390/md15020047	2017
Genetics	Noncontiguous finished genome sequences and description of Bacillus massiliglaciei, Bacillus mediterraneensis, Bacillus massilinigeriensis, Bacillus phocaeensis and Bacillus tuaregi, five new species identified by culturomics.	Cadoret F, Alou MT, Afouda P, Traore IS, Brechard L, Michelle C, Di Pinto F, Andrieu C, Delerce J, Levasseur A, Fournier PE, Raoult D.	New Microbes New Infect	10.1016/j.nmni.2017.04.005	2017
Genetics	Genome sequence of Oceanobacillus picturae strain S1, an halophilic bacterium first isolated in human gut.	Lagier JC, Khelaifia S, Azhar EI, Croce O, Bibi F, Jiman-Fatani AA, Yasir M, Helaby HB, Robert C, Fournier PE, Raoult D.	Stand Genomic Sci	10.1186/s40793-015-0081-2	2015
Phylogeny	Oceanobacillus chungangensis sp. nov., isolated from a sand dune.	Lee DC, Kang H, Weerawongwiwat V, Kim B, Choi YW, Kim W	Int J Syst Evol Microbiol	10.1099/ijs.0.046441-0	2013
Phylogeny	Oceanobacillus kapialis sp. nov., from fermented shrimp paste in Thailand.	Namwong S, Tanasupawat S, Lee KC, Lee JS	Int J Syst Evol Microbiol	10.1099/ijs.0.007161-0	2009
Phylogeny	Virgibacillus carmonensis sp. nov., Virgibacillus necropolis sp. nov. and Virgibacillus picturae sp. nov., three novel species isolated from deteriorated mural paintings, transfer of the species of the genus salibacillus to Virgibacillus, as Virgibacillus marismortui comb. nov. and Virgibacillus salexigens comb. nov., and emended description of the genus Virgibacillus.	Heyrman J, Logan NA, Busse HJ, Balcaen A, Lebbe L, Rodriguez-Diaz M, Swings J, De Vos P	Int J Syst Evol Microbiol	10.1099/ijs.0.02371-0	2003

References

#5586	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14867
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#23030	Jung-Sook Lee,Jee-Min Lim,Keun Chul Lee,Jae-Chan Lee,Yong-Ha Park,Chang-Jin Kim: Virgibacillus koreensis sp. nov., a novel bacterium from a salt field, and transfer of Virgibacillus picturae to the genus Oceanobacillus as Oceanobacillus picturae comb. nov. with emended descriptions. IJSEM 56: 251 - 257 2006 ( DOI 10.1099/ijs.0.63734-0 , PubMed 16403894 )
#33218	; Curators of the CIP;
#60324	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54775
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68382	Automatically annotated from API zym .
#121823	Collection of Institut Pasteur ; Curators of the CIP; CIP 108264
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Oceanobacillus picturae (DSM 14867, LMG 19492, CCUG 54775)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042678605

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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