Name: Swaminathania salitolerans PA51
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133661

Type strain:

Species: Swaminathania salitolerans

Strain Designation: PA51

Culture col. no.: LMG 21291, MTCC 3852

NCBI tax ID(s): 1307931 (strain), 182838 (species)

SI-ID 85582

LMG 21291, BCRC 17617, CCRC 17617, BCC 17684, TBRC 2

Special Collections

Literature strains

Section

Swaminathania salitolerans PA51 is a Gram-negative, motile, rod-shaped bacterium that was isolated from plant associated.

Gram-negative
motile
rod-shaped
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Swaminathania*
	Species	**Swaminathania salitolerans**
	Full Scientific Name (LPSN)	Swaminathania salitolerans Loganathan and Nair 2004

Information on morphological and physiological properties Morphology

[Ref.: #30003]	Gram stain	negative

[Ref.: #30003]	Cell length	2.5 µm

[Ref.: #30003]	Cell width	0.8 µm

[Ref.: #30003]	Cell shape	rod-shaped

[Ref.: #30003]	Motility	yes

[Ref.: #30003]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	pH	Kind of pH		pH
[Ref.: #30003]			optimum	3.5

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30003]		NaCl		optimum	3	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30003]	acetate ChEBI	+	carbon source
[Ref.: #30003]	arabinose ChEBI	+	carbon source
[Ref.: #30003]	fructose ChEBI	+	carbon source
[Ref.: #30003]	galactose ChEBI	+	carbon source
[Ref.: #30003]	glutamate ChEBI	+	carbon source
[Ref.: #30003]	glycerol ChEBI	+	carbon source
[Ref.: #30003]	lactate ChEBI	+	carbon source
[Ref.: #30003]	mannitol ChEBI	+	carbon source
[Ref.: #30003]	mannose ChEBI	+	carbon source
[Ref.: #30003]	sorbitol ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30003]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30003]	Sample type/isolated from	plant associated
* marker position based on {}

Isolation sources categories

#Host

#Plants

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF459454 (>99% sequence identity) for Asaia from Microbeatlas

Aquatic Samples	5
Soil Samples	25
Animal Samples	239
Plant Samples	24
Total Samples	293

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30003]	Halobharath swaminathanianus strain PA 51 16S ribosomal RNA gene, partial sequence	AF459454	1455	GenBank ENA	182838 tax ID
[Ref.: #124043]	Swaminathania salitolerans genes for 16S rRNA, 16S-23S rRNA ITS, 23S rRNA, partial and complete sequence.	AB220163	763	GenBank ENA	182838 tax ID	*

[Ref.: #30003]

GC-content

58.75 mol%

Availability in culture collections External links

[Ref.: #30003]

Culture collection no.

LMG 21291, MTCC 3852

[Ref.: #91548]

SI-ID 85582

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Swaminathania salitolerans gen. nov., sp. nov., a salt-tolerant, nitrogen-fixing and phosphate-solubilizing bacterium from wild rice (Porteresia coarctata Tateoka).	Loganathan P, Nair S	Int J Syst Evol Microbiol	10.1099/ijs.0.02817-0	2004	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30003

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26367 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91548

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID85582.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

#26367

IJSEM 1185 2004 ( DOI 10.1099/ijs.0.02817-0 , PubMed 15280289 )

* These data were automatically processed and therefore are not curated

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