Name: Actinomadura miaoliensis BC44T-5
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133428

Type strain:

Species: Actinomadura miaoliensis

Strain Designation: BC44T-5

Culture col. no.: FIRDI 002, BCRC 16873, LMG 24335, JCM 16702, NCIMB 14658

Strain history: BCRC 16873 <-- M. Tseng et al. BC 44T-5.

NCBI tax ID(s): 430685 (species)

SI-ID 361147

BCRC 16873, LMG 24335, JCM 16702

Special Collections

Other strains from Actinomadura miaoliensis

Section

Actinomadura miaoliensis BC44T-5 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinomadura*
	Species	**Actinomadura miaoliensis**
	Full Scientific Name (LPSN)	Actinomadura miaoliensis Tseng et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #28914]	Gram stain	positive

[Ref.: #28914]	Motility	no

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #28914]	growth	25-55 °C
[Ref.: #28914]	optimum	40 °C
[Ref.: #67770]	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #28914]

Oxygen tolerance

aerobe

[Ref.: #28914]

Ability of spore formation

yes

[Ref.: #67770]

Observation

quinones: MK-9(H₄), MK-9(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #28914]	esculin ChEBI	+	hydrolysis
[Ref.: #28914]	fructose ChEBI	+	carbon source
[Ref.: #28914]	glucose ChEBI	+	carbon source
[Ref.: #28914]	lactose ChEBI	+	carbon source
[Ref.: #28914]	nitrate ChEBI	+	reduction
[Ref.: #28914]	rhamnose ChEBI	+	carbon source
[Ref.: #28914]	sorbitol ChEBI	+	carbon source
[Ref.: #28914]	trehalose ChEBI	+	carbon source
[Ref.: #28914]	xylose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #28914]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Miaoli
[Ref.: #67770]	Country	Taiwan, Province of China
[Ref.: #67770]	Country ISO 3 Code	TWN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EF116925 (>99% sequence identity) for Actinomadura from Microbeatlas

Aquatic Samples	18
Soil Samples	179
Animal Samples	30
Plant Samples	17
Total Samples	244

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #28914]	Actinomadura miaoliensis strain BC 44T-5 16S ribosomal RNA gene, partial sequence	EF116925	1514	GenBank ENA	430685 tax ID

[Ref.: #28914]	GC-content	70.6 mol%
[Ref.: #67770]	GC-content	70.6 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #28914]

Culture collection no.

FIRDI 002, BCRC 16873, LMG 24335, JCM 16702, NCIMB 14658

[Ref.: #91433]

SI-ID 361147

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Chemical constituents from a soil-derived actinomycete, Actinomadura miaoliensis BCRC 16873, and their inhibitory activities on lipopolysaccharide-induced tumor necrosis factor production.	Tseng M, Su YS, Cheng MJ, Liu TW, Chen IS, Wu MD, Chang HS, Yuan GF	Chem Biodivers	10.1002/cbdv.201200242	2013	*
Phylogeny	Actinomadura miaoliensis sp. nov., a thermotolerant polyester-degrading actinomycete.	Tseng M, Yang SF, Hoang KC, Liao HC, Yuan GF, Liao CC	Int J Syst Evol Microbiol	10.1099/ijs.0.001479-0	2009	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#28914

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25353 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91433

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID361147.1 )

#25353

IJSEM 517 2009 ( DOI 10.1099/ijs.0.001479-0 , PubMed 19244432 )

* These data were automatically processed and therefore are not curated

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