Name: Flavobacterium inkyongense KCTC 52244
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133310

Type strain:

Species: Flavobacterium inkyongense

Culture col. no.: KCTC 52244, JCM 31385, IMCC 27201, BCRC 81043

Strain history: <- Jang-Cheon Cho, Inha Univ.

NCBI tax ID(s): 1960096 (species)

Section

Flavobacterium inkyongense KCTC 52244 is an aerobe, rod-shaped bacterium that forms circular colonies and was isolated from an artificial freshwater pond .

colony-forming
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium inkyongense**
	Full Scientific Name (LPSN)	Flavobacterium inkyongense Park et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	negative

[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #67771]	Motility	no

[Ref.: #25147]	Colony color	yellow
[Ref.: #25147]	Colony shape	circular
[Ref.: #25147]	Incubation period	3 days
[Ref.: #25147]	Cultivation medium used	R2A

[Ref.: #25147]	Pigment production	no
[Ref.: #25147]	Pigment name	Flexirubin-type

Information on culture and growth conditions Culture and growth conditions

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Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

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Culture medium

NA (Nutrient agar)

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Culture medium growth

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Culture medium

Marine agar (MA)

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Culture medium growth

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Culture medium

Trypticase Soy Agar (TSA)

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Culture medium growth

		Temperature
[Ref.: #25147]	growth	10-37 °C
[Ref.: #25147]	optimum	30 °C
[Ref.: #67770]	growth	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #25147]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25147]			optimum	7
[Ref.: #25147]			growth	7.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25147]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25147]		NaCl		optimum	0	%
[Ref.: #25147]		NaCl		growth	0-0.25	%(w/v)

[Ref.: #67770]	Observation	quinones: MK-6
[Ref.: #67771]	Observation	quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25147]	2-oxoglutarate ChEBI	+	respiration
[Ref.: #25147]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #25147]	casein	+	hydrolysis
[Ref.: #25147]	chitin ChEBI	-	hydrolysis
[Ref.: #25147]	D-galactose ChEBI	+	respiration
[Ref.: #25147]	dna ChEBI	-	hydrolysis
[Ref.: #25147]	esculin ChEBI	+	hydrolysis
[Ref.: #25147]	glucose ChEBI	-	fermentation
[Ref.: #25147]	L-glutamate ChEBI	+	respiration
[Ref.: #25147]	L-proline ChEBI	+	respiration
[Ref.: #25147]	maltose ChEBI	+	respiration
[Ref.: #25147]	nitrate ChEBI	-	reduction
[Ref.: #25147]	starch ChEBI	+	hydrolysis
[Ref.: #25147]	tween 20 ChEBI	-	hydrolysis
[Ref.: #25147]	tween 40 ChEBI	+	respiration
[Ref.: #25147]	tween 80 ChEBI	+	hydrolysis
[Ref.: #25147]	tween 80 ChEBI	+	respiration
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #25147]		hydrogen sulfide ChEBI	no
[Ref.: #25147]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #25147]	acid phosphatase	+	3.1.3.2
[Ref.: #25147]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25147]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #25147]	alpha-fucosidase	-	3.2.1.51
[Ref.: #25147]	alpha-galactosidase	-	3.2.1.22
[Ref.: #25147]	alpha-glucosidase	-	3.2.1.20
[Ref.: #25147]	alpha-mannosidase	-	3.2.1.24
[Ref.: #25147]	arginine dihydrolase	-	3.5.3.6
[Ref.: #25147]	beta-galactosidase	-	3.2.1.23
[Ref.: #25147]	beta-glucosidase	-	3.2.1.21
[Ref.: #25147]	beta-glucuronidase	-	3.2.1.31
[Ref.: #25147]	catalase	-	1.11.1.6
[Ref.: #25147]	cystine arylamidase	-	3.4.11.3
[Ref.: #25147]	cytochrome oxidase	+	1.9.3.1
[Ref.: #25147]	esterase (C 4)	+
[Ref.: #25147]	esterase Lipase (C 8)	+
[Ref.: #25147]	gelatinase	+
[Ref.: #25147]	leucine arylamidase	+	3.4.11.1
[Ref.: #25147]	lipase (C 14)	-
[Ref.: #25147]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #25147]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25147]	trypsin	+	3.4.21.4
[Ref.: #25147]	urease	+	3.5.1.5
[Ref.: #25147]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

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Fatty acid	Percentage
C15:0 iso	31.1
C15:1 iso G	17.6
C15:0 iso 3OH	9.5
C17:0 iso 3OH	6.7
C16:1ω7c / C16:1ω6c	6.2
C14:0 iso	3.4
10-Methyl C16:0 / iso-C17:1ω9c	3.3
C13:0 iso	3.2
C15:0 3OH	2.7
C16:0 iso 3OH	1.9
C15:0 2OH	1.4
C15:1ω6c	1.3
C16:0 iso	1.3
C12:0 iso	1.1
C16:0	1.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25147]	Sample type/isolated from	an artificial freshwater pond (Inkyong Pond)
[Ref.: #25147]	Geographic location (country and/or sea, region)	Inkyong Pond, Incheon
[Ref.: #25147]	Country	Republic of Korea
[Ref.: #25147]	Country ISO 3 Code	KOR
[Ref.: #25147]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Artificial freshwater pond (Inkyong)
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From freshwater, artificial pond(man-made lakes, Inkyungho)
[Ref.: #67771]	Geographic location (country and/or sea, region)	Inha University, Nam-gu, Incheon
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
[Ref.: #67771]	Geographic location	37.4497°/126.6560°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Engineered	-	-
#Environmental	#Aquatic	#Pond (small)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25147]	16S rRNA gene sequence	KX025140	1421	ENA	1960096 tax ID

[Ref.: #25147]	GC-content	32.1 mol%	Thermal denaturation, fluorometry
[Ref.: #67770]	GC-content	32.1 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67771]	GC-content	32.1 mol%

Availability in culture collections External links

[Ref.: #25147]

Culture collection no.

KCTC 52244, JCM 31385, IMCC 27201, BCRC 81043

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium humi sp. nov., a flexirubin-type pigment producing bacterium, isolated from soil.	Kim I, Kim J, Chhetri G, Seo T	J Microbiol	10.1007/s12275-019-9350-x	2019	*
Phylogeny	Flavobacterium inkyongense sp. nov., isolated from an artificial freshwater pond.	Park M, Joung Y, Nam GG, Kim S, Cho JC	Int J Syst Evol Microbiol	10.1099/ijsem.0.001575	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25147

M. J. Park, Y.,Nam, G. G.,Kim, S.,Cho, J. C.: Flavobacterium inkyongense sp. nov., isolated from an artificial freshwater pond. IJSEM 67: 82 - 86 2017 ( DOI 10.1099/ijsem.0.001575 , PubMed 27902204 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
* These data were automatically processed and therefore are not curated

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