Name: Aquisalinus luteolus NH6-79
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132998

Type strain:

Species: Aquisalinus luteolus

Strain Designation: NH6-79

Culture col. no.: DSM 105303, CGMCC 1.14984, JCM 30557, MCCC 1K00277

Strain history: X.-Q. Zhang; Coll. of Life Sci., Zhejiang Univ., China; NH6-79.

NCBI tax ID(s): 1566827 (species)

SI-ID 403008

DSM 105303

Special Collections

Section

Aquisalinus luteolus NH6-79 is an obligate aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from Surface seawater.

colony-forming
Gram-negative
motile
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	"Parvularculales"
	Family	"Parvularculaceae"
	Genus	*Aquisalinus*
	Species	**Aquisalinus luteolus**
	Full Scientific Name (LPSN)	Aquisalinus luteolus Ying et al. 2021

Synonym

Parvularcula flava

Information on morphological and physiological properties Morphology

[Ref.: #43155]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %97.296

[Ref.: #43155]	Cell length	0.6-1.8 µm

[Ref.: #43155]	Cell width	0.5-0.9 µm

[Ref.: #43155]	Motility	yes

[Ref.: #43155]	Colony size	1 mm
[Ref.: #43155]	Colony color	yellow
[Ref.: #43155]	Colony shape	circular
[Ref.: #43155]	Incubation period	7 days
[Ref.: #43155]	Cultivation medium used	modified marine 2216 agar

[Ref.: #43155]	Pigment production	yes
[Ref.: #43155]	Pigment name	carotenoids
[Ref.: #43155]	Pigment production	no
[Ref.: #43155]	Pigment name	bacteriochlorophyll alpha

Multimedia content

[Ref.: #24786]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43155]

Culture medium

modified marine 2216 agar

[Ref.: #43155]

Culture medium growth

[Ref.: #24786]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #24786]

Culture medium growth

[Ref.: #24786]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24786]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #24786]	growth	37 °C
[Ref.: #43155]	optimum	37 °C
[Ref.: #43155]	growth	4-42 °C
[Ref.: #67770]	growth	37 °C

	pH	Kind of pH		pH
[Ref.: #43155]			optimum	7
[Ref.: #43155]			growth	6.0-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43155]

Oxygen tolerance

obligate aerobe

[Ref.: #43155]	Type of spore	spore
[Ref.: #43155]	Ability of spore formation	no
[Ref.: #69480]	Ability of spore formation	no Confidence in %90.43
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43155]		NaCl		growth	0.5-11	%(w/v)
[Ref.: #43155]		NaCl		optimum	3.5-5.0	%

[Ref.: #67770]

Observation

quinones: Q-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #43155]	alginate ChEBI	-	hydrolysis
[Ref.: #68368]	amygdalin ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE, API 20E
[Ref.: #43155]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #43155]	cysteine ChEBI	+	assimilation
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE, API 20E
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68368]	D-mannitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #43155]	dna ChEBI	-	hydrolysis
[Ref.: #43155]	esculin ChEBI	+	hydrolysis
[Ref.: #68369]	esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #43155]	gelatin ChEBI	+	hydrolysis
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE, API 20E
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #43155]	glucose ChEBI	-	fermentation
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68368]	L-arabinose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68369]	malate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #43155]	peptone	+	assimilation
[Ref.: #43155]	skimmed milk	-	hydrolysis
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #43155]	starch ChEBI	-	hydrolysis
[Ref.: #68368]	sucrose ChEBI	-	fermentation	* from API 20E
[Ref.: #43155]	thiosulfate ChEBI	+	assimilation
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE, API 20E
[Ref.: #43155]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43155]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43155]	tween 60 ChEBI	+	hydrolysis
[Ref.: #43155]	tween 80 ChEBI	+	hydrolysis
[Ref.: #43155]	tyrosine ChEBI	+	hydrolysis
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE, API 20E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic resistance	Concentration
[Ref.: #43155]	ciprofloxacin ChEBI	yes	5	µg (disc)
[Ref.: #43155]	doxycycline ChEBI	yes	30	µg (disc)
[Ref.: #43155]	kanamycin ChEBI	yes	30	µg (disc)
[Ref.: #43155]	neomycin ChEBI	yes	30	µg (disc)

	Metabolite	Production
[Ref.: #43155]	acetoin ChEBI	yes
[Ref.: #43155]	hydrogen sulfide ChEBI	yes
[Ref.: #43155]	polyhydroxybutyrate ChEBI	yes
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68369]	indole ChEBI	no	* from API 20NE, API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #43155]	acetoin ChEBI	+
[Ref.: #43155]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	+			* from API 20E
[Ref.: #68369]	indole ChEBI			-	* from API 20NE, API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE, API 20E
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E
[Ref.: #43155]	beta-glucosidase	-	3.2.1.21
[Ref.: #68369]	beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #43155]	catalase	+	1.11.1.6
[Ref.: #43155]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE, API 20E
[Ref.: #68369]	gelatinase	-		* from API 20NE, API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE, API 20E
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43155]

Fatty acid	Percentage	ECL
11-methyl-C18:1ω7c	5.2
Unknown ECL 18.846 / C19:1ω6c	1.3	18845

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #24786]	17739	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #24786]	24602	+	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24786]	Sample type/isolated from	Surface seawater
[Ref.: #24786]	Geographic location (country and/or sea, region)	South China Sea
[Ref.: #24786]	Country	China
[Ref.: #24786]	Country ISO 3 Code	CHN
[Ref.: #24786]	Continent	Asia
[Ref.: #24786]	Geographic location	18.1156°/110.7610°

[Ref.: #43155]	Sample type/isolated from	surface seawater
[Ref.: #43155]	Sampling date	2009-06
[Ref.: #43155]	Geographic location (country and/or sea, region)	South China Sea, China
[Ref.: #43155]	Country	China
[Ref.: #43155]	Country ISO 3 Code	CHN
[Ref.: #43155]	Continent	Asia
[Ref.: #43155]	Geographic location	18.0000°/110.0000°

[Ref.: #67770]	Sample type/isolated from	Surface seawater of the South China Sea
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Surface water

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KM199855 (>99% sequence identity) for Parvularcula flava from Microbeatlas

Aquatic Samples	102
Soil Samples	5
Animal Samples	11
Plant Samples	2
Total Samples	120

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24786]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24786]	Aquisalinus luteolus strain NH6-79 16S ribosomal RNA gene, partial sequence	KM199855	1426	GenBank ENA	1566827 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aquisalinus luteolus CGMCC 1.14984	GCA_014640455	contig	GenBank ENA	1566827 tax ID	*
[Ref.: #66792]	Parvularcula flava strain CGMCC 1.14984	1566827.5	wgs	PATRIC	1566827 tax ID	*
[Ref.: #66792]	Aquisalinus luteolus NH6-79	GCA_009712425	scaffold	GenBank ENA	1566827 tax ID	*

[Ref.: #43155]	GC-content	60.7 mol%	high performance liquid chromatography (HPLC)
[Ref.: #24786]	GC-content	60.7 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Parvularcula flava strain CGMCC 1.14984 PATRIC: 1566827.4
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Parvularcula flava strain CGMCC 1.14984 PATRIC: 1566827.5
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.296	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.548	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.43	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	83.061	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.822	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	58.873	no

Availability in culture collections External links

[Ref.: #24786]

Culture collection no.

DSM 105303, CGMCC 1.14984, JCM 30557, MCCC 1K00277

[Ref.: #91274]

SI-ID 403008

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Parvularcula flava as Aquisalinus luteolus nom. nov. and emended description of the genus Aquisalinus.	Ying JJ, Wu ZC, Fang YC, Xu L, Sun C	Int J Syst Evol Microbiol	10.1099/ijsem.0.005072	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24786

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105303

#43155

Xin-Qi Zhang, Yue-Hong Wu, Xiang Zhou, Xin Zhang, Xue-Wei Xu and Min Wu: Parvularcula flava sp. nov., an alphaproteobacterium isolated from surface seawater of the South China Sea. IJSEM 66: 3498 - 3502 2016 ( DOI 10.1099/ijsem.0.001225 , PubMed 27282411 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68369

Automatically annotated from API 20NE .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#91274

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403008.1 )

* These data were automatically processed and therefore are not curated

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Parvularcula flava strain CGMCC 1.14984

Parvularcula flava strain CGMCC 1.14984

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