Name: Actinomadura adrarensis ACD12
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132565

Type strain:

Species: Actinomadura adrarensis

Strain Designation: ACD12

Culture col. no.: DSM 46745, CECT 8842, JCM 31696

Strain history: CECT 8842 <-- DSM 46745 <-- N. Sabaou; Ecole Normale Supérieure, Algeria; ACD12.

NCBI tax ID(s): 1819600 (species)

SI-ID 405248

DSM 46745

Special Collections

Section

Actinomadura adrarensis ACD12 is a Gram-negative bacterium that was isolated from Saharan soil, sandy loam from a palm grove.

Gram-negative
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinomadura*
	Species	**Actinomadura adrarensis**
	Full Scientific Name (LPSN)	Actinomadura adrarensis Lahoum et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43944]	Gram stain	negative

[Ref.: #43944]	Motility	no

[Ref.: #43944]	Pigment production	no
[Ref.: #43944]	Pigment name	diffusible pigments

Multimedia content

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Caption:

Medium 553 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

Bennett's agar

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Culture medium growth

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Culture medium

Humic acid-vitamin agar

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Culture medium growth

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Culture medium

ISP 2 agar

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Culture medium growth

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Culture medium

ISP 3 agar

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Culture medium growth

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Culture medium

ISP 4 agar

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Culture medium growth

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Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #24354]	growth	28 °C
[Ref.: #43944]	optimum	30 °C
[Ref.: #67770]	growth	28 °C

	pH	Kind of pH		pH
[Ref.: #43944]			optimum	8

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43944]		NaCl		optimum	0	%(w/v)

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Observation

quinones: MK-9(H₆)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43944]	adenine ChEBI	-	degradation
[Ref.: #43944]	arbutin ChEBI	-	degradation
[Ref.: #43944]	benzoate ChEBI	-	degradation
[Ref.: #43944]	casein	+	degradation
[Ref.: #43944]	cellobiose ChEBI	+	carbon source
[Ref.: #43944]	D-fructose ChEBI	-	carbon source
[Ref.: #43944]	D-galactose ChEBI	-	carbon source
[Ref.: #43944]	D-glucose ChEBI	-	carbon source
[Ref.: #43944]	D-mannitol ChEBI	-	carbon source
[Ref.: #43944]	D-mannose ChEBI	+	carbon source
[Ref.: #43944]	D-ribose ChEBI	+	carbon source
[Ref.: #43944]	D-sorbitol ChEBI	-	carbon source
[Ref.: #43944]	D-trehalose ChEBI	+	carbon source
[Ref.: #43944]	D-xylose ChEBI	-	carbon source
[Ref.: #43944]	esculin ChEBI	+	degradation
[Ref.: #43944]	gelatin ChEBI	+	degradation
[Ref.: #43944]	guanine ChEBI	-	degradation
[Ref.: #43944]	hypoxanthine ChEBI	+	degradation
[Ref.: #43944]	L-arabinose ChEBI	-	carbon source
[Ref.: #43944]	L-rhamnose ChEBI	-	carbon source
[Ref.: #43944]	L-tyrosine ChEBI	-	degradation
[Ref.: #43944]	lactose ChEBI	-	carbon source
[Ref.: #43944]	maltose ChEBI	+	carbon source
[Ref.: #43944]	melibiose ChEBI	-	carbon source
[Ref.: #43944]	nitrate ChEBI	-	reduction
[Ref.: #43944]	oxalate ChEBI	-	degradation
[Ref.: #43944]	propionate ChEBI	-	degradation
[Ref.: #43944]	pyruvate ChEBI	+	degradation
[Ref.: #43944]	raffinose ChEBI	-	carbon source
[Ref.: #43944]	ribitol ChEBI	+	carbon source
[Ref.: #43944]	starch ChEBI	-	degradation
[Ref.: #43944]	succinate ChEBI	-	degradation
[Ref.: #43944]	tartrate ChEBI	-	degradation
[Ref.: #43944]	tween 80 ChEBI	+	degradation
[Ref.: #43944]	xanthine ChEBI	-	degradation
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43944]

Fatty acid	Percentage
C16:0	22.2
10-methyl C17:0	15.2
C17:1ω9c	11.5
C15:0	11.1
10-methyl C18:0	9.3
C17:0	7.1
C18:1ω9c	5
C16:0 iso	4.5
C19:1ω9c	4.2
10-methyl C16:0	2.5
C14:0	1.7
C18:0	1.4
C15:0 3OH	0.9
C16:1 iso H	0.6
C18:0 iso	0.5
iso-C16:1 F	0.5
C18:1 iso H	0.4
C13:0	0.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24354]	Sample type/isolated from	Saharan soil, sandy loam from a palm grove
[Ref.: #24354]	Geographic location (country and/or sea, region)	Adrar province, Bouda region (27° 52' N, 0° 17' W)
[Ref.: #24354]	Country	Algeria
[Ref.: #24354]	Country ISO 3 Code	DZA
[Ref.: #24354]	Continent	Africa
[Ref.: #24354]	Geographic location	27.8667°/-0.2833°

[Ref.: #43944]	Sample type/isolated from	Saharan sandy loam soil sample collected from palm grove of Bouda region, Adrar province, southern Algeria
[Ref.: #43944]	Geographic location (country and/or sea, region)	Bouda region, Adrar province
[Ref.: #43944]	Country	Algeria
[Ref.: #43944]	Country ISO 3 Code	DZA
[Ref.: #43944]	Continent	Africa
[Ref.: #43944]	Geographic location	27.8667°/-0.2833°
[Ref.: #43944]	Enrichment culture	Chitin-vitamin agar
[Ref.: #43944]	Enrichment culture composition	supplemented 80 µg/ mL cycloheximide
[Ref.: #43944]	Enrichment culture duration	21 days
[Ref.: #43944]	Enrichment culture temperature	30 ̊C

[Ref.: #67770]	Sample type/isolated from	Saharan soil from Adrar Province
[Ref.: #67770]	Geographic location (country and/or sea, region)	south of Algeria
[Ref.: #67770]	Country	Algeria
[Ref.: #67770]	Country ISO 3 Code	DZA
[Ref.: #67770]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Sandy
#Engineered	#Agriculture	#Grove (Orchard)
#Environmental	#Terrestrial	#Desert
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24354]	Actinomadura adrarensis strain ACD12 16S ribosomal RNA gene, partial sequence	KU356942	1484	GenBank ENA	1819600 tax ID
[Ref.: #24354]	Actinomadura adrarensis strain ACD12 16S ribosomal RNA, partial sequence	NR_144570	1484	GenBank ENA	1819600 tax ID

Availability in culture collections External links

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Culture collection no.

DSM 46745, CECT 8842, JCM 31696

[Ref.: #90882]

SI-ID 405248

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomadura adrarensis sp. nov., an actinobacterium isolated from Saharan soil.	Lahoum A, Bouras N, Verheecke C, Mathieu F, Schumann P, Sproer C, Klenk HP, Sabaou N	Int J Syst Evol Microbiol	10.1099/ijsem.0.001114	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24354

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46745

#43944

Abdelhadi Lahoum, Noureddine Bouras, Carol Verheecke, Florence Mathieu, Peter Schumann, Cathrin Spröer, Hans-Peter Klenk, Nasserdine Sabaou: Actinomadura adrarensis sp. nov., an actinobacterium isolated from Saharan soil. IJSEM 66: 2724 - 2729 2016 ( DOI 10.1099/ijsem.0.001114 , PubMed 27117880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#90882

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405248.1 )

* These data were automatically processed and therefore are not curated

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