Name: Actinomadura gamaensis NEAU-Gz5
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132523

Type strain:

Species: Actinomadura gamaensis

Strain Designation: NEAU-Gz5

Culture col. no.: DSM 100815, CGMCC 4.7301, JCM 32486

Strain history: CGMCC 4.7301 <-- C. Liu; Northeast Agric. Univ., China; NEAU-Gz5.

NCBI tax ID(s): 1763541 (species)

SI-ID 404709

DSM 100815

Special Collections

DSMZ
JCM

Section

Actinomadura gamaensis NEAU-Gz5 is a bacterium that was isolated from tropical soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinomadura*
	Species	**Actinomadura gamaensis**
	Full Scientific Name (LPSN)	Actinomadura gamaensis Abagana et al. 2016

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #24312]

Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #24312]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24312]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9(H₈), MK-9(H₆)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24312]	Sample type/isolated from	tropical soil
[Ref.: #24312]	Geographic location (country and/or sea, region)	Hadjer lamis, Gama (13° 0' N, 15° 44' E)
[Ref.: #24312]	Country	Chad
[Ref.: #24312]	Country ISO 3 Code	TCD
[Ref.: #24312]	Continent	Africa
[Ref.: #24312]	Geographic location	13.0000°/15.7333°

[Ref.: #67770]	Sample type/isolated from	Tropical soil from Gama
[Ref.: #67770]	Country	Chad
[Ref.: #67770]	Country ISO 3 Code	TCD
[Ref.: #67770]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Climate	#Hot	#Tropical

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24312]	Actinomadura gamaensis strain NEAU-Gz5 16S ribosomal RNA gene, partial sequence	KT989505	1523	GenBank ENA	1763541 tax ID

[Ref.: #24312]	GC-content	67.1 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	65.4-68.8 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #24312]

Culture collection no.

DSM 100815, CGMCC 4.7301, JCM 32486

[Ref.: #90849]

SI-ID 404709

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomadura harenae sp. nov., a novel actinomycete isolated from sea sand in Sanya.	Hu J, Han C, Yu B, Zhao J, Guo X, Shen Y, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.003819	2020	*
Phylogeny	Actinomadura logoneensis sp. nov., a novel actinomycete isolated from the soil.	Shi L, Han L, Guo X, Zhao J, Wang J, Wang H, Jiang S, Xiang W, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.003579	2019	*
Phylogeny	Actinomadura rhizosphaerae sp. nov., isolated from rhizosphere soil of the plant Azadirachta indica.	Malisorn K, Kanchanasin P, Phongsopitanun W, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002940	2018	*
Phylogeny	Actinomadura gamaensis sp. nov., a novel actinomycete isolated from soil in Gama, Chad.	Abagana AY, Sun P, Liu C, Cao T, Zheng W, Zhao S, Xiang W, Wang X	Antonie Van Leeuwenhoek	10.1007/s10482-016-0683-8	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24312

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100815

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#90849

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404709.1 )

* These data were automatically processed and therefore are not curated

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