Name: Amycolatopsis deserti GY024
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132522

Type strain:

Species: Amycolatopsis deserti

Strain Designation: GY024, GYO24

Culture col. no.: DSM 100106, NCIMB 14972, NRRL B-65266

Strain history: <- G. Y. A. Tan, University of Malaya, Kuala Lumpur; GY024

NCBI tax ID(s): 185696 (species)

SI-ID 399950

DSM 100106

Special Collections

DSMZ

Section

Amycolatopsis deserti GY024 is a bacterium that was isolated from arid composite soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Amycolatopsis*
	Species	**Amycolatopsis deserti**
	Full Scientific Name (LPSN)	Amycolatopsis deserti Busarakam et al. 2017

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24311]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #24311]

Culture medium growth

[Ref.: #24311]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24311]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24311]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24311]	Sample type/isolated from	arid composite soil
[Ref.: #24311]	Country	Australia
[Ref.: #24311]	Country ISO 3 Code	AUS
[Ref.: #24311]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Climate	#Hot	#Arid

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24311]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24311]	Amycolatopsis deserti strain GY024 16S ribosomal RNA gene, partial sequence	AF453717	1430	GenBank ENA	185696 tax ID

[Ref.: #24311]

GC-content

70.1 mol%

fluorimetric

Availability in culture collections External links

[Ref.: #24311]

Culture collection no.

DSM 100106, NCIMB 14972, NRRL B-65266

[Ref.: #90848]

SI-ID 399950

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Amycolatopsis cappadoca sp. nov., isolated from soil.	Isik K, Gencbay T, Topkara AR, Saricaoglu S, Saygin H, Ay H, Cetin D, Guven K, Sahin N	Antonie Van Leeuwenhoek	10.1007/s10482-018-1023-y	2018	*
Phylogeny	Classification of thermophilic actinobacteria isolated from arid desert soils, including the description of Amycolatopsis deserti sp. nov.	Busarakam K, Brown R, Bull AT, Tan GY, Zucchi TD, da Silva LJ, de Souza WR, Goodfellow M	Antonie Van Leeuwenhoek	10.1007/s10482-015-0635-8	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24311

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100106

#90848

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399950.1 )

* These data were automatically processed and therefore are not curated

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