Micromonospora zhanjiangensis (DSM 45902, CCTCC AA 2014018, 29021/10ATCC1)

Name: Micromonospora zhanjiangensis (DSM 45902, CCTCC AA 2014018, 29021/10ATCC1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131548

Type strain

Strain Designation 29021/10ATCC1, 2902AT01

Culture col. no. DSM 45902 CCTCC AA 2014018 29021/10ATCC1 2902AT01 JCM 31748

NCBI tax ID(s) 1522057

Special Collections DSMZ JCM

History DSMZ <- L. Li, Wuhan Univ., China; 2902AT01 JCM <-- CCTCC AA 2014018 <-- L. Li; Wuhan Univ., China; 2902at01.

Links

Micromonospora zhanjiangensis 29021/10ATCC1 is a bacterium that was isolated from mangrove forest soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 403898

JCM 31748,DSM 45902

@ref 20215

Last LPSN update 2026-05-29 08:37:38

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Micromonospora

Species Micromonospora zhanjiangensis

Full scientific name Micromonospora zhanjiangensis Zhang et al. 2015

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125439	positive	99.878
125439		94.181

Multimedia

@ref:	22775
multimedia content:	DSM_45902.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45902.jpg
caption:	Medium 553 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
22775	N-Z-AMINE-MEDIUM (DSMZ Medium 554)	Medium recipe at MediaDive	Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water
22775	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
22775	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
22775	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.93

Observation

67770

Observationquinones: MK-10(H₆), MK-10(H₈)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Mangrove
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22775	mangrove forest soil	Guangdong province, Zhanjiang	China	CHN	Asia
67770	Mangrove soil	Zhanjiang, Guangdong Province	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22775	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4267670v1 assembly for Micromonospora zhanjiangensis JCM 31748	scaffold	GCA_042676705	1522057	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22775	Micromonospora zhanjiangensis strain 2902at01 16S ribosomal RNA gene, partial sequence	KJ742700	1480		1522057

GC content

@ref	GC-content (mol%)	Method
22775	70.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4267670v1 assembly for Micromonospora zhanjiangensis JCM 31748
NCBI: GCA_042676705

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.93	no
125439	motility	BacteriaNetⓘ	no	94.18	no
125439	gram_stain	BacteriaNetⓘ	positive	99.88	no
125439	spore_formation	BacteriaNetⓘ	yes	87.67	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Micromonospora zhanjiangensis sp. nov., isolated from mangrove forest soil.	Zhang L, Li L, Deng Z, Hong K	Int J Syst Evol Microbiol	10.1099/ijsem.0.000667	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22775	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45902
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Micromonospora zhanjiangensis (DSM 45902, CCTCC AA 2014018, 29021/10ATCC1)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042676705

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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