Strain identifier

BacDive ID: 131548

Type strain: Yes

Species: Micromonospora zhanjiangensis

Strain Designation: 29021/10ATCC1, 2902AT01

Strain history: CCTCC AA 2014018 <-- L. Li; Wuhan Univ., China; 2902at01.

NCBI tax ID(s): 1522057 (species)

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General

@ref: 22775

BacDive-ID: 131548

DSM-Number: 45902

keywords: 16S sequence, Bacteria, mesophilic

description: Micromonospora zhanjiangensis 29021/10ATCC1 is a mesophilic bacterium that was isolated from mangrove forest soil.

NCBI tax id

  • NCBI tax id: 1522057
  • Matching level: species

strain history

@refhistory
22775<- L. Li, Wuhan Univ., China; 2902AT01
67770CCTCC AA 2014018 <-- L. Li; Wuhan Univ., China; 2902at01.

doi: 10.13145/bacdive131548.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micromonosporales
  • family: Micromonosporaceae
  • genus: Micromonospora
  • species: Micromonospora zhanjiangensis
  • full scientific name: Micromonospora zhanjiangensis Zhang et al. 2015

@ref: 22775

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micromonosporaceae

genus: Micromonospora

species: Micromonospora zhanjiangensis

full scientific name: Micromonospora zhanjiangensis Zhang et al. 2015

strain designation: 29021/10ATCC1, 2902AT01

type strain: yes

Morphology

multimedia

  • @ref: 22775
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45902.jpg
  • caption: Medium 553 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
22775N-Z-AMINE-MEDIUM (DSMZ Medium 554)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium554.pdf
22775GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
22775GPHF-MEDIUM (DSMZ Medium 553)yeshttps://mediadive.dsmz.de/medium/553Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water

culture temp

@refgrowthtypetemperature
22775positivegrowth28
67770positivegrowth28

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-10(H6), MK-10(H8)

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
22775mangrove forest soilGuangdong province, ZhanjiangChinaCHNAsia
67770Mangrove soilZhanjiang, Guangdong ProvinceChinaCHNAsia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Mangrove
#Environmental#Terrestrial#Forest
#Environmental#Terrestrial#Soil

Safety information

risk assessment

  • @ref: 22775
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 22775
  • description: Micromonospora zhanjiangensis strain 2902at01 16S ribosomal RNA gene, partial sequence
  • accession: KJ742700
  • length: 1480
  • database: nuccore
  • NCBI tax ID: 1522057

GC content

  • @ref: 22775
  • GC-content: 70.2
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 22775

culture collection no.: DSM 45902, CCTCC AA 2014018, JCM 31748

straininfo link

  • @ref: 89962
  • straininfo: 403898

literature

  • topic: Phylogeny
  • Pubmed-ID: 26446196
  • title: Micromonospora zhanjiangensis sp. nov., isolated from mangrove forest soil.
  • authors: Zhang L, Li L, Deng Z, Hong K
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000667
  • year: 2015
  • mesh: Avicennia, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Micromonospora/*classification/genetics/isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Ubiquinone/chemistry, *Wetlands
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
22775Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-45902Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45902)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
89962Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID403898.1