Name: Actinoplanes rhizophilus NEAU-A-2
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131547

Type strain:

Species: Actinoplanes rhizophilus

Strain Designation: NEAU-A-2

Culture col. no.: DSM 46672, CGMCC 4.7133, KCTC 39768, JCM 33034

Strain history: CGMCC 4.7133 <-- H. He et al.; Northeast Agric. Univ., China; NEAU-A-2.

NCBI tax ID(s): 1416877 (species)

SI-ID 398377

DSM 46672

Special Collections

Section

When using BacDive for research please cite our paper

Actinoplanes rhizophilus NEAU-A-2 is a mesophilic bacterium that was isolated from rhizosphere soil of Sansevieria trifasciata Prain.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Actinoplanes*
	Species	**Actinoplanes rhizophilus**
	Full Scientific Name (LPSN)	Actinoplanes rhizophilus He et al. 2015

Synonym

Paractinoplanes rhizophilus

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #22774]

Caption:

Medium 553 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22774]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22774]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9(H₁₀), MK-9(H₂), MK-10(H₂), MK-10(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22774]	Sample type/isolated from	rhizosphere soil of Sansevieria trifasciata Prain
[Ref.: #22774]	Host species	Sansevieria trifasciata
[Ref.: #22774]	Geographic location (country and/or sea, region)	Heilongsjiang province, Harbin (45° 30' N 127° 06' E)
[Ref.: #22774]	Country	China
[Ref.: #22774]	Country ISO 3 Code	CHN
[Ref.: #22774]	Continent	Asia
[Ref.: #22774]	Geographic location	45.5000°/127.1000°

[Ref.: #67770]	Sample type/isolated from	Rhizosphere soil of Sansevieria trifasciata Prain from Heilongjiang Province
[Ref.: #67770]	Host species	Sansevieria trifasciata
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF600711 (>99% sequence identity) for Actinoplanes rhizophilus from Microbeatlas

Aquatic Samples	3
Soil Samples	178
Animal Samples	5
Plant Samples	5
Total Samples	191

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22774]	Actinoplanes rhizophilus strain NEAU-A-2 16S ribosomal RNA gene, partial sequence	KF600711	1512	GenBank ENA	1416877 tax ID

[Ref.: #22774]	GC-content	73.3 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	73-73.6 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #22774]

Culture collection no.

DSM 46672, CGMCC 4.7133, KCTC 39768, JCM 33034

[Ref.: #89961]

SI-ID 398377

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Actinoplanes deserti sp. nov., isolated from a desert soil sample.	Habib N, Khan IU, Chu X, Xiao M, Li S, Fang BZ, Zhi XY, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-018-1121-x	2018	*
Phylogeny	Actinoplanes rhizophilus sp. nov., an actinomycete isolated from the rhizosphere of Sansevieria trifasciata Prain.	He H, Xing J, Liu C, Li C, Ma Z, Li J, Xiang W, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.000646	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22774

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46672

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89961

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398377.1 )

* These data were automatically processed and therefore are not curated

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