Modestobacter muralis (DSM 100205, CECT 8845, MDVD1)

Name: Modestobacter muralis (DSM 100205, CECT 8845, MDVD1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131489

Type strain

Strain Designation MDVD1

Culture col. no. DSM 100205 CECT 8845 MDVD1 JCM 31704

NCBI tax ID(s) 1608614

Special Collections DSMZ JCM

History <- M. E. Trujillo, Universidad de Salamanca, Spain; MDVD1 CECT 8845 <-- M. E. Trujillo, Univ. Salamanca, Spain; MDVD1.

Links

Modestobacter muralis MDVD1 is a bacterium that was isolated from deteriorated sandstone from the surface of a historical building.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 404142

CECT 8845,DSM 100205

@ref 20215

Last LPSN update 2026-02-09 11:31:28

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Geodermatophilales

Family Geodermatophilaceae

Genus Modestobacter

Species Modestobacter muralis

Full scientific name Modestobacter muralis Trujillo et al. 2015

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	98.6

Multimedia

@ref:	22716
multimedia content:	DSM_100205.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_100205.jpg
caption:	Medium 553 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
22716	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
22716	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
22716	GEO-MEDIUM (DSMZ Medium 714)	Medium recipe at MediaDive	Name: GEO-MEDIUM (DSMZ Medium 714) Composition: Agar 15.0 g/l CaCO3 1.0 g/l Starch 1.0 g/l Glucose 1.0 g/l Yeast extract 1.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
22716	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.8

Observation

67770

Observationquinones: MK-9(H₄)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Built environment	-
#Environmental	#Terrestrial	#Geologic

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
22716	deteriorated sandstone from the surface of a historical building	Salamanca (40° 57' 45'' N; 5° 45' 00'' W)	Spain	ESP	Europe	40.9625	-5.75 40.9625/-5.75
67770	Deteriorated sandstone scraped from the surface of a historic building	Salamanca	Spain	ESP	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22716	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1068210v1 assembly for Modestobacter muralis DSM 100205	contig	GCA_010682105	1608614.3	8054084875	1608614	51.63
67770	ASM1068662v1 assembly for Modestobacter muralis DSM 100205	contig	GCA_010686625	1608614.4		1608614	51.62

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22716	Modestobacter sp. MDVD1 partial 16S rRNA gene, strain MDVD1	LN810545	1459		1608614

GC content

@ref	GC-content (mol%)	Method
22716	71.5	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Modestobacter muralis DSM 100205
NCBI: GCA_010686625

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	68.80	no
125439	motility	BacteriaNetⓘ	no	61.70	no
125439	gram_stain	BacteriaNetⓘ	positive	98.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Modestobacter muralis strain DSM 100205
PATRIC: 1608614.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	85.20	no
125438	anaerobic	anaerobicⓘ	no	95.94	no
125438	spore-forming	spore-formingⓘ	yes	63.22	no
125438	aerobic	aerobicⓘ	yes	89.22	no
125438	thermophilic	thermophileⓘ	no	93.00	no
125438	flagellated	motile2+ⓘ	no	63.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Modestobacter lapidis sp. nov. and Modestobacter muralis sp. nov., isolated from a deteriorated sandstone historic building in Salamanca, Spain.	Trujillo ME, Goodfellow M, Busarakam K, Riesco R	Antonie Van Leeuwenhoek	10.1007/s10482-015-0482-7	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22716	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100205
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Modestobacter muralis (DSM 100205, CECT 8845, MDVD1)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_010682105

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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