Lactobacillus taiwanensis (DSM 28674, ST-465-5-N)

Name: Lactobacillus taiwanensis (DSM 28674, ST-465-5-N)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131173

Type strain

Strain Designation ST-465-5-N

Culture col. no. DSM 28674 ST-465-5-N

NCBI tax ID(s) 508451

Special Collections DSMZ Mouse DZIF

Links

Lactobacillus taiwanensis ST-465-5-N is a microaerophile, mesophilic prokaryote that was isolated from mouse gut.

microaerophile mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 407627

DSM 28674

@ref 20215

Last LPSN update 2025-12-16 10:01:11

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lactobacillus

Species Lactobacillus taiwanensis

Full scientific name Lactobacillus taiwanensis Wang et al. 2009

BacDive ID	Other strains from **Lactobacillus taiwanensis** (7)	Type strain
6690	L. taiwanensis FI RDI 006, DSM 21401, BCRC 17755, CIP 110030, ... (type strain)
131174	L. taiwanensis MJJ0609-8, DSM 100220
156060	L. taiwanensis CCUG 60241
165908	L. taiwanensis JCM 8667
165913	L. taiwanensis JCM 8675
165922	L. taiwanensis JCM 8687
165929	L. taiwanensis JCM 8694

Morphology

Cell morphology

@ref	Motility	Confidence
125438		93
125438		95.203

Colony morphology

22465

Incubation period1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22465	MRS MEDIUM (DSMZ Medium 11)		Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
22465	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
22465	microaerophile
125439	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		98.6
125438		91.964

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Gastrointestinal tract	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22465	mouse gut	Freising	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence KR364778 (>99% sequence identity) for Lactobacillus from Microbeatlas

Aquatic Samples	5652
Soil Samples	4782
Animal Samples	173268
Plant Samples	1535
Total Samples	185237

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22465	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2462243v1 assembly for Lactobacillus taiwanensis DSM 28674	contig	GCA_024622435	508451.37	508451	66.95

Genome browser: GCA_024622435

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22465	Lactobacillus sp. ST-465-5-N 16S ribosomal RNA gene, partial sequence	KR364778	1419		1796641

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Lactobacillus taiwanensis DSM 28674
NCBI: GCA_024622435

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.60	no
125439	motility	BacteriaNetⓘ	no	68.90	no
125439	gram_stain	BacteriaNetⓘ	negative	84.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus taiwanensis DSM 28674
NCBI: GCA_024622435.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	95.20	no
125438	anaerobic	anaerobicⓘ	no	71.80	yes
125438	aerobic	aerobicⓘ	no	97.05	yes
125438	spore-forming	spore-formingⓘ	no	91.96	no
125438	thermophilic	thermophileⓘ	no	96.00	no
125438	flagellated	motile2+ⓘ	no	93.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22465	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28674
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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