Name: Ligilactobacillus murinus MJJ0609_7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130963

Type strain:

Species: Ligilactobacillus murinus

Strain Designation: MJJ0609_7

Culture col. no.: DSM 100194

Strain history: <- T. Clavel, TU Munich, Freising-Weihenstephan, Germany <- J.F. Baines, Max Planck Institute for Evolutionary Biology, Plön, Gemany; MJJ0609_7

NCBI tax ID(s): 1622 (species)

SI-ID 403593

DSM 100194

Other strains from Ligilactobacillus murinus

L. murinus 313, DSM 20452, ATCC 35020, CNRZ ... (type strain)
L. murinus 12, DSM 20453
L. murinus 3B2 BAP1, DSM 26546
L. murinus 3F2 BAP2, 3F2BAP4, DSM 26548
L. murinus BARN-424-CC-5, DSM 28690
L. murinus M-6244-3B, DSM 28683
L. murinus M5-8a, DSM 100193

Section

Ligilactobacillus murinus MJJ0609_7 is a microaerophile, mesophilic bacterium that was isolated from wild mouse.

mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Ligilactobacillus*
	Species	**Ligilactobacillus murinus**
	Full Scientific Name (LPSN)	Ligilactobacillus murinus (Hemme et al. 1982) Zheng et al. 2020

Synonym

Lactobacillus murinus

Information on morphological and physiological properties Morphology

[Ref.: #22255]

Incubation period

2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22255]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #22255]

Culture medium growth

[Ref.: #22255]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22255]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22255]			growth	37 °C

[Ref.: #22255]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #22255]

Oxygen tolerance

microaerophile

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22255]	Sample type/isolated from	wild mouse
[Ref.: #22255]	Geographic location (country and/or sea, region)	Plön
[Ref.: #22255]	Country	Germany
[Ref.: #22255]	Country ISO 3 Code	DEU
[Ref.: #22255]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host

#Mammals

#Muridae (Mouse/Rat)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KU196089 (>99% sequence identity) for Ligilactobacillus from Microbeatlas

Aquatic Samples	383
Soil Samples	571
Animal Samples	37886
Plant Samples	247
Total Samples	39087

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22255]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22255]	Lactobacillus murinus strain DSM 100194 16S ribosomal RNA gene, partial sequence	KU196089	1501	ENA	1622 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Ligilactobacillus murinus DSM 100194	GCA_024622365	contig	GenBank	1622 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Ligilactobacillus murinus DSM 100194 NCBI: GCA_024622365.1
[Ref.: #69480]	flagellated	no	97.365	no
[Ref.: #69480]	gram-positive	yes	91.266	no
[Ref.: #69480]	anaerobic	no	86.643	no
[Ref.: #69480]	aerobic	no	97.727	yes
[Ref.: #69480]	halophile	yes	78.916	no
[Ref.: #69480]	spore-forming	no	92.536	no
[Ref.: #69480]	motile	no	95.314	no
[Ref.: #69480]	glucose-ferment	yes	91.278	no
[Ref.: #69480]	thermophile	no	98.747	yes
[Ref.: #69480]	glucose-util	yes	93.148	no

Availability in culture collections External links

[Ref.: #22255]

Culture collection no.

DSM 100194

[Ref.: #89440]

SI-ID 403593

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22255

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100194

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#89440

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403593.1 )

* These data were automatically processed and therefore are not curated

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Ligilactobacillus murinus DSM 100194

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