Ligilactobacillus murinus (DSM 28690, BARN-424-CC-5)

Name: Ligilactobacillus murinus (DSM 28690, BARN-424-CC-5)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130960

Type strain

Strain Designation BARN-424-CC-5

Culture col. no. DSM 28690 BARN-424-CC-5

NCBI tax ID(s) 1622

Special Collections DSMZ Mouse DZIF

History DSMZ <- T. Clavel, TU Munich, Freising-Weihenstephan, Germany; BARN-424-CC-5

Links

Ligilactobacillus murinus BARN-424-CC-5 is a microaerophile bacterium that was isolated from ARE mouse caecum.

microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 399018

DSM 28690

@ref 20215

Last LPSN update 2026-05-29 08:37:30

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Ligilactobacillus

Species Ligilactobacillus murinus

Full scientific name Ligilactobacillus murinus (Hemme et al. 1982) Zheng et al. 2020

Synonyms (1)

Lactobacillus murinus

BacDive ID	Other strains from **Ligilactobacillus murinus** (7)	Type strain
6484	L. murinus 313, DSM 20452, ATCC 35020, CNRZ 220, CCUG ... (type strain)
6485	L. murinus 12, DSM 20453
130363	L. murinus 3B2 BAP1, DSM 26546
130364	L. murinus 3F2 BAP2, 3F2BAP4, DSM 26548
130961	L. murinus M-6244-3B, DSM 28683
130962	L. murinus M5-8a, DSM 100193
130963	L. murinus MJJ0609_7, DSM 100194

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	positive	94.054

Colony morphology

22252

Incubation period2-3 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22252	MRS MEDIUM (DSMZ Medium 11)		Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
22252	positive	growth	37

Physiology and metabolism

Oxygen tolerance

22252

Oxygen tolerancemicroaerophile

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Gastrointestinal tract	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22252	ARE mouse caecum	Fresing	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence KU196091 (>99% sequence identity) for Ligilactobacillus from Microbeatlas

Aquatic Samples	383
Soil Samples	571
Animal Samples	37886
Plant Samples	247
Total Samples	39087

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22252	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2462232v1 assembly for Ligilactobacillus murinus DSM 28690	contig	GCA_024622325	1622.131	1622	52.02

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22252	Ligilactobacillus murinus strain DSM 28690 16S ribosomal RNA gene, partial sequence	KU196091	1408		1622

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Ligilactobacillus murinus DSM 28690
NCBI: GCA_024622325.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	94.05	no
125438	anaerobic	anaerobicⓘ	no	86.87	yes
125438	aerobic	aerobicⓘ	no	96.42	yes
125438	spore-forming	spore-formingⓘ	no	86.90	no
125438	thermophilic	thermophileⓘ	no	95.46	yes
125438	flagellated	motile2+ⓘ	no	88.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22252	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28690
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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