Name: Citrobacter freundii DSM 14984
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130291

Type strain:

Species: Citrobacter freundii

Culture col. no.: DSM 14984, WA 1

Strain history: <- O. Savelieva, Department of Microbiology, Moscow State University

NCBI tax ID(s): 546 (species)

SI-ID 404811

DSM 14984

Other strains from Citrobacter freundii

Section

Citrobacter freundii DSM 14984 is a mesophilic bacterium that was isolated from methanogenic sludge of lab-scale bed reactor treating manure waste water.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Citrobacter*
	Species	**Citrobacter freundii**
	Full Scientific Name (LPSN)	Citrobacter freundii (Braak 1928) Werkman and Gillen 1932 (Approved Lists 1980)

	Synonym	"Bethesda* ballerupensis"*
	Synonym	"Bacterium* freundii"*

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21548]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #21548]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #21548]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21548]			growth	28 °C

[Ref.: #21548]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21548]	Sample type/isolated from	methanogenic sludge of lab-scale bed reactor treating manure waste water
[Ref.: #21548]	Country	Russia
[Ref.: #21548]	Country ISO 3 Code	RUS
* marker position based on {}

Isolation sources categories

#Engineered	#Bioreactor	-
#Environmental	#Terrestrial	#Mud (Sludge)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY259630 (>99% sequence identity) for Citrobacter from Microbeatlas

Aquatic Samples	7413
Soil Samples	3252
Animal Samples	52478
Plant Samples	2947
Total Samples	66090

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21548]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21548]	Citrobacter freundii strain WA1 16S ribosomal RNA gene, partial sequence	AY259630	1446	ENA	546 tax ID

Availability in culture collections External links

[Ref.: #21548]

Culture collection no.

DSM 14984, WA 1

[Ref.: #88826]

SI-ID 404811

Literature:

Topic	Title	Authors	Journal	DOI	Year
Cultivation	Resuscitation of eleven-year VBNC Citrobacter.	Dhiaf A, Bakhrouf A, Witzel KP	J Water Health	10.2166/wh.2008.131	2008	*
Metabolism	Utilization of aminoaromatic acids by a methanogenic enrichment culture and by a novel Citrobacter freundii strain.	Savelieva O, Kotova I, Roelofsen W, Stams AJ, Netrusov A	Arch Microbiol	10.1007/s00203-003-0645-1	2004	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21548

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14984

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88826

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404811.1 )

* These data were automatically processed and therefore are not curated

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