Desulfatiglans parachlorophenolica (DSM 27197, JCM 19179, DS)

Name: Desulfatiglans parachlorophenolica (DSM 27197, JCM 19179, DS)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130282

Type strain

Strain Designation DS

Culture col. no. DSM 27197 JCM 19179 DS

NCBI tax ID(s) 1261393

Special Collections DSMZ JCM

History <- A. Katayama, Nagoya Univ., EcoTopia Science Inst., Japan; strain DS <- D. Suzuki {2011} A. Katayama and D. Suzuki; Nagoya Univ., Japan; DS.

Links

Desulfatiglans parachlorophenolica DS is an anaerobe, mesophilic prokaryote that was isolated from river sediment contaminated with volatile organic carbons.

anaerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 402381

JCM 19179,DSM 27197

@ref 20215

Last LPSN update 2026-02-09 11:31:11

Domain Bacteria

Phylum Thermodesulfobacteriota

Class Desulfobacteria

Order Desulfatiglandales

Family Desulfatiglandaceae

Genus Desulfatiglans

Species Desulfatiglans parachlorophenolica

Full scientific name Desulfatiglans parachlorophenolica Suzuki et al. 2014

Morphology

Colony morphology

22128

Incubation period8-14 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22128	DESULFOBACTER MEDIUM (DSMZ Medium 193)		Medium recipe at MediaDive	Name: DESULFOBACTER MEDIUM (DSMZ Medium 193; with strain-specific modifications) Composition: NaCl 6.97906 g/l Na2SO4 2.99102 g/l Na2CO3 1.49551 g/l MgCl2 x 6 H2O 1.29611 g/l Na-benzoate 0.598205 g/l KCl 0.498505 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299102 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149552 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498505 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
22128	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

22128

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Contamination	-
#Environmental	#Aquatic	#River (Creek)
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22128	river sediment contaminated with volatile organic carbons	Aichi Prefecture, Nagoya, Arako River	Japan	JPN	Asia
67770	River sediment contaminated with volatile organic compounds in Japan

Taxonmaps

69479

Global distribution of 16S sequence AB763347 (>99% sequence identity) for Desulfatiglans parachlorophenolica from Microbeatlas

Aquatic Samples	13
Soil Samples	2
Animal Samples	1
Plant Samples
Total Samples	16

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22128	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22128	Desulfatiglans parachlorophenolica gene for 16S ribosomal RNA, partial sequence	AB763347	1493		1261393

GC content

@ref	GC-content (mol%)	Method
22128	58.9	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Anaerobic mineralization of 2,4,6-tribromophenol to CO2 by a synthetic microbial community comprising Clostridium, Dehalobacter, and Desulfatiglans.	Li Z, Yoshida N, Wang A, Nan J, Liang B, Zhang C, Zhang D, Suzuki D, Zhou X, Xiao Z, Katayama A.	Bioresour Technol	10.1016/j.biortech.2014.10.097	2015
	Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment.	Shin B, Kim M, Zengler K, Chin KJ, Overholt WA, Gieg LM, Konstantinidis KT, Kostka JE.	Sci Rep	10.1038/s41598-018-36567-x	2019
Metabolism	Environmental filtering determines family-level structure of sulfate-reducing microbial communities in subsurface marine sediments.	Marshall IPG, Ren G, Jaussi M, Lomstein BA, Jorgensen BB, Roy H, Kjeldsen KU.	ISME J	10.1038/s41396-019-0387-y	2019
	Microbial Community Structure of Subglacial Lake Whillans, West Antarctica.	Achberger AM, Christner BC, Michaud AB, Priscu JC, Skidmore ML, Vick-Majors TJ, WISSARD Science Team.	Front Microbiol	10.3389/fmicb.2016.01457	2016
Genetics	Single-Cell Genomics Reveals a Diverse Metabolic Potential of Uncultivated Desulfatiglans-Related Deltaproteobacteria Widely Distributed in Marine Sediment.	Jochum LM, Schreiber L, Marshall IPG, Jorgensen BB, Schramm A, Kjeldsen KU.	Front Microbiol	10.3389/fmicb.2018.02038	2018
Phylogeny	Reclassification of Desulfobacterium anilini as Desulfatiglans anilini comb. nov. within Desulfatiglans gen. nov., and description of a 4-chlorophenol-degrading sulfate-reducing bacterium, Desulfatiglans parachlorophenolica sp. nov.	Suzuki D, Li Z, Cui X, Zhang C, Katayama A	Int J Syst Evol Microbiol	10.1099/ijs.0.064360-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22128	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27197
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Desulfatiglans parachlorophenolica (DSM 27197, JCM 19179, DS)

Name and taxonomic classification

Morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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