Name: Achromobacter marplatensis AU 14580
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130145

Type strain:

Species: Achromobacter marplatensis

Strain Designation: AU 14580, R-46660

Culture col. no.: DSM 29603, CCUG 61968, LMG 26692, CIP 110843

Strain history: CIP <- 2014, CCUG <- 2011, LMG

NCBI tax ID(s): 470868 (species)

SI-ID 376319

LMG 26692, CCUG 61968, DSM 29603

Other strains from Achromobacter marplatensis

A. marplatensis B2, CCUG 56371, CCM 7608, CECT ... (type strain)
A. marplatensis CCUG 61951, LMG 26682
A. marplatensis CCUG 61969, LMG 26693
A. marplatensis CCUG 61970, LMG 26694

Section

Achromobacter marplatensis AU 14580 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from non-cystic fibrosis patient, sputum.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Alcaligenaceae*
	Genus	*Achromobacter*
	Species	**Achromobacter marplatensis**
	Full Scientific Name (LPSN)	Achromobacter marplatensis Gomila et al. 2011

Synonym

Achromobacter spiritinus

Information on morphological and physiological properties Morphology

[Ref.: #123264]	Gram stain	negative

[Ref.: #123264]	Cell shape	rod-shaped

[Ref.: #123264]	Motility	yes

[Ref.: #21443]	Incubation period	1-2 days

[Ref.: #62763]	Incubation period	1 day

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21443]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #21443]

Culture medium growth

[Ref.: #21443]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21443]

Culture medium composition

expand / minimize

[Ref.: #39701]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #39701]

Culture medium growth

[Ref.: #39701]

Culture medium composition

expand / minimize

[Ref.: #123264]

Culture medium

CIP Medium 72

[Ref.: #123264]

Culture medium growth

[Ref.: #123264]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #21443]	growth	30 °C
[Ref.: #39701]	growth	30 °C
[Ref.: #62763]	growth	30 °C

[Ref.: #21443]	Temperature range	mesophilic
[Ref.: #39701]	Temperature range	mesophilic
[Ref.: #62763]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #62763]

Oxygen tolerance

aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE, API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #21443]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #21443]	cytochrome-c oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #62763]

Fatty acid	Percentage	ECL
C16:0	33.9	16
C17:0 CYCLO	26.4	16.888
C16:1 ω7c	14.7	15.819
C14:0 3OH/C16:1 ISO I	6.9	15.485
C18:1 ω7c /12t/9t	6.8	17.824
C14:0	6	14
C12:0 2OH	3	13.178
Unidentified	1.2	16.298
C18:0	0.6	18
C12:0	0.6	12

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #21443]	24065	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	+	+	not determinedn.d.
[Ref.: #62763]	8645	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	+	+	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #62763]	4525	-	+	+	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21443]	Sample type/isolated from	non-cystic fibrosis patient, sputum
[Ref.: #21443]	Country	USA
[Ref.: #21443]	Country ISO 3 Code	USA
[Ref.: #21443]	Continent	North America

[Ref.: #62763]	Sample type/isolated from	Human sputum, non-cystic fibrosis patient
[Ref.: #62763]	Sampling date	2007
[Ref.: #62763]	Country	USA
[Ref.: #62763]	Country ISO 3 Code	USA
[Ref.: #62763]	Continent	North America

[Ref.: #123264]	Sample type/isolated from	Human, Sputum, non-cystic fibrosis patient
[Ref.: #123264]	Country	United States of America
[Ref.: #123264]	Country ISO 3 Code	USA
[Ref.: #123264]	Continent	North America
[Ref.: #123264]	Isolation date	2007-01-02
* marker position based on {}

Isolation sources categories

#Infection	#Patient	-
#Host Body Product	#Fluids	#Sputum

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HE613447 (>99% sequence identity) for Achromobacter from Microbeatlas

Aquatic Samples	1212
Soil Samples	1429
Animal Samples	2896
Plant Samples	1751
Total Samples	7288

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21443]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #123264]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21443]	Achromobacter spiritinus partial 16S rRNA gene, type strain R-46660T	HE613447	1508	ENA	470868 tax ID

Availability in culture collections External links

[Ref.: #21443]

Culture collection no.

DSM 29603, CCUG 61968, LMG 26692, CIP 110843

[Ref.: #88699]

SI-ID 376319

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Achromobacter animicus sp. nov., Achromobacter mucicolens sp. nov., Achromobacter pulmonis sp. nov. and Achromobacter spiritinus sp. nov., from human clinical samples.	Vandamme P, Moore ER, Cnockaert M, De Brandt E, Svensson-Stadler L, Houf K, Spilker T, Lipuma JJ	Syst Appl Microbiol	10.1016/j.syapm.2012.10.003	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21443

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29603

#39701 ; Curators of the CIP;
#62763 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 61968

#68369

Automatically annotated from API 20NE .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88699

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID376319.1 )

#123264 Collection of Institut Pasteur ; Curators of the CIP; CIP 110843
* These data were automatically processed and therefore are not curated

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