Promicromonospora vindobonensis (DSM 15942, CCM 7044, V-45)

BacDive ID 12602

Type strain

Strain Designation V-45, V45

Culture col. no. DSM 15942 CCM 7044 V-45 NBRC 16525 IFO 16525 4 more

NCBI tax ID(s) 195748

Special Collections DSMZ JCM CIP

History DSMZ <- P. Kämpfer; V-45 <- H. J. Busse <- C. Zlamala JCM <-- CCM 7044 <-- H.-J. Busse V45 <-- C. Zlamala. CIP <- 2003, CCM <- H.J. Busse, Vienna Univ., Vienna, Austria <- C. Zlamala: strain V45

Links

Promicromonospora vindobonensis V-45 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from air in the medieval "Virgilkapelle".

Gram-negative rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 88109

IFO 16525,CCM 7044,DSM 15942,CIP 108164,NBRC 16525,JCM 14120

@ref 20215

Last LPSN update 2026-05-29 08:27:50

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Promicromonosporaceae

Genus Promicromonospora

Species Promicromonospora vindobonensis

Full scientific name Promicromonospora vindobonensis Busse et al. 2003

BacDive ID	Other strains from **Promicromonospora vindobonensis** (1)	Type strain
139808	P. vindobonensis I10A-02180, DSM 24547

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
123845	negative	rod-shaped
125439	positive		99.868
125439			94.702

Colony morphology

123845

Hemolysis ability0

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6199	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
33208	MEDIUM 464 - for Citricoccus muralis		Distilled water make up to (1000.000 ml);Sodium chloride (5.000 g);Agar(20.000 g);Peptone (10.000 g);Beef extract (10.000 g)
123845	CIP Medium 464	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6199	positive	growth	28
33208	positive	growth	30
67770	positive	growth	28
123845	positive	growth	25-37
123845	negative	growth	10
123845	negative	growth	41
123845	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
123845	obligate aerobe
125439	obligate aerobe	98.957

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123845	NaCl	positive	growth	0-4 %
123845	NaCl		growth	6 %
123845	NaCl		growth	8 %
123845	NaCl		growth	10 %

Observation

67770

Observationquinones: MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
123845	16947 ChEBI	citrate	-	carbon source
123845	4853 ChEBI	esculin	+	hydrolysis
123845	606565 ChEBI	hippurate	+	hydrolysis
123845	17632 ChEBI	nitrate	+	reduction
123845	17632 ChEBI	nitrate	-	respiration
123845	16301 ChEBI	nitrite	-	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123845	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
123845	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
123845	15688 ChEBI	acetoin	-
123845	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
123845	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
123845	amylase	+
123845	beta-galactosidase	+	3.2.1.23
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123845	caseinase	+	3.4.21.50
123845	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
123845	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123845	gamma-glutamyltransferase	+	2.3.2.2
123845	gelatinase	+/-
123845	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
123845	lipase	-
68382	lipase (C 14)	-		from API zym
123845	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
123845	ornithine decarboxylase	-	4.1.1.17
123845	oxidase	-
123845	phenylalanine ammonia-lyase	-	4.3.1.24
123845	protease	+
68382	trypsin	+	3.4.21.4	from API zym
123845	tryptophan deaminase	-
123845	tween esterase	-
123845	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123845	-	+	+	+	-	+	-	-	+	-	-	-	+	+	-	+	+	+	+	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123845	not determinedn.d.	+	-	+	+	+	-	-	+	-	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+	-	+	-	-	-	-	+	-	+	+	+	-	-	-	+	-	-	-	+	-	-	-	-	-	+	-	-	-	-	+	-	+	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	+	+	-	+	-	-	-	+	-	+	-	+	-	-	-	-	+	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Air	#Indoor Air

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
6199	air in the medieval "Virgilkapelle"	Vienna	Austria	AUT	Europe
67770	Air in the 'Virgilkapelle' chapel	Vienna	Austria	AUT	Europe
123845	Environment, Air in the chapel	Vienna	Austria	AUT	Europe	1999

Taxonmaps

69479

Global distribution of 16S sequence AJ487302 (>99% sequence identity) for Promicromonospora from Microbeatlas

Aquatic Samples	0
Soil Samples	93
Animal Samples	5
Plant Samples	73
Total Samples	171

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6199	1	Risk group (German classification) According to TRBA 466
123845	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4268586v1 assembly for Promicromonospora vindobonensis CCM 7044	contig	GCA_042685865	195748	55.67

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6199	Promicromonospora vindobonesis partial 16S rRNA gene, type strain V-45T	AJ487302	1342		195748
124043	Promicromonospora vindobonensis strain CCM 7044 16S ribosomal RNA gene, partial sequence.	MT760119	1347		195748

GC content

@ref	GC-content (mol%)	Method
6199	70
67770	70	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4268586v1 assembly for Promicromonospora vindobonensis CCM 7044
NCBI: GCA_042685865

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.96	no
125439	motility	BacteriaNetⓘ	no	94.70	no
125439	gram_stain	BacteriaNetⓘ	positive	99.87	no
125439	spore_formation	BacteriaNetⓘ	yes	68.86	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Promicromonospora vindobonensis sp. nov. and Promicromonospora aerolata sp. nov., isolated from the air in the medieval 'Virgilkapelle' in Vienna.	Busse HJ, Zlamala C, Buczolits S, Lubitz W, Kampfer P, Takeuchi M	Int J Syst Evol Microbiol	10.1099/ijs.0.02522-0	2003

References

#6199	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15942
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#33208	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123845	Collection of Institut Pasteur ; Curators of the CIP; CIP 108164
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Promicromonospora vindobonensis (DSM 15942, CCM 7044, V-45)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042685865

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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