Name: Myceligenerans halotolerans XJEEM-11063
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 12590

Type strain:

Species: Myceligenerans halotolerans

Strain Designation: XJEEM-11063

Culture col. no.: DSM 21949, CCTCC AA 208063, JCM 19555, XJEEM 11063, CCTCC AB 208063

Strain history: DSM 21949 <-- Y. Wang XJEEM 11063.

NCBI tax ID(s): 552903 (species)

SI-ID 399269

DSM 21949

Special Collections

Section

Myceligenerans halotolerans XJEEM-11063 is a bacterium that was isolated from saline alkali soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Promicromonosporaceae*
	Genus	*Myceligenerans*
	Species	**Myceligenerans halotolerans**
	Full Scientific Name (LPSN)	Myceligenerans halotolerans Wang et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #21364]	Colony color	Sand yellow (1002)
[Ref.: #21364]	Incubation period	10-14 days
[Ref.: #21364]	Cultivation medium used	ISP 2

[Ref.: #21364]	Colony color	Ochre brown (8001)
[Ref.: #21364]	Incubation period	10-14 days
[Ref.: #21364]	Cultivation medium used	ISP 4

[Ref.: #21364]	Colony color	Light ivory (1015)
[Ref.: #21364]	Incubation period	10-14 days
[Ref.: #21364]	Cultivation medium used	ISP 5

[Ref.: #21364]	Colony color	Corn yellow (1006) - sand yellow (1002)
[Ref.: #21364]	Incubation period	10-14 days
[Ref.: #21364]	Cultivation medium used	ISP 7

[Ref.: #21364]	Colony color	Corn yellow (1006) - ivory (1014)
[Ref.: #21364]	Incubation period	10-14 days
[Ref.: #21364]	Cultivation medium used	suter with tyrosine

[Ref.: #21364]	Colony color	Ivory (1014) - sand yellow (1002)
[Ref.: #21364]	Incubation period	10-14 days
[Ref.: #21364]	Cultivation medium used	suter without tyrosine

[Ref.: #21364]	Incubation period	10-14 days
[Ref.: #21364]	Cultivation medium used	ISP 3

[Ref.: #21364]	Multicellular complex forming ability	no
[Ref.: #21364]	Medium Name (multicellularity)	ISP 2

[Ref.: #21364]	Multicellular complex forming ability	no
[Ref.: #21364]	Medium Name (multicellularity)	ISP 3

[Ref.: #21364]	Multicellular complex forming ability	no
[Ref.: #21364]	Medium Name (multicellularity)	ISP 4

[Ref.: #21364]	Multicellular complex forming ability	no
[Ref.: #21364]	Medium Name (multicellularity)	ISP 5

[Ref.: #21364]	Multicellular complex forming ability	no
[Ref.: #21364]	Medium Name (multicellularity)	ISP 7

[Ref.: #21364]	Multicellular complex forming ability	no
[Ref.: #21364]	Medium Name (multicellularity)	Suter with tyrosine

[Ref.: #21364]	Multicellular complex forming ability	no
[Ref.: #21364]	Medium Name (multicellularity)	Suter without tyrosine

Information on culture and growth conditions Culture and growth conditions

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Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

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Culture medium

suter with tyrosine

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

suter without tyrosine

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Culture medium growth

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Culture medium composition

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	Temperatures	Kind of temperature		Temperature
[Ref.: #16065]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #21364]		NaCl		maximum	7.5	%

[Ref.: #16065]	Murein short key	A11.57
[Ref.: #16065]	Murein types	A4alpha L-Lys-L-Thr-D-Glu

[Ref.: #67770]

Observation

quinones: MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #21364]	arabinose ChEBI	+
[Ref.: #21364]	cellulose ChEBI	+
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #21364]	fructose ChEBI	+
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #21364]	glucose ChEBI	+
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #21364]	mannose ChEBI	+
[Ref.: #21364]	myo-inositol ChEBI	-
[Ref.: #21364]	raffinose ChEBI	-
[Ref.: #21364]	rhamnose ChEBI	+
[Ref.: #21364]	sucrose ChEBI	+
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #21364]	xylose ChEBI	+
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	+	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne, API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68379]	pyrazinamidase	+	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #21364]	493	+/-	+	+	+	-	+	+	-	+	-	+	not determinedn.d.	+/-	-	+	+/-	+/-	-	-	+/-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #21364]	1005	not determinedn.d.	+	+	+	-	+	-	+/-	-	-	+/-	+	+	+	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16065]	Sample type/isolated from	saline alkali soil
[Ref.: #16065]	Geographic location (country and/or sea, region)	Xinjiang province
[Ref.: #16065]	Country	China
[Ref.: #16065]	Country ISO 3 Code	CHN
[Ref.: #16065]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Salt lake
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang, north-western China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Condition	#Alkaline	-
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU910872 (>99% sequence identity) for Myceligenerans halotolerans subclade from Microbeatlas

Aquatic Samples	14
Soil Samples	121
Animal Samples	50
Plant Samples
Total Samples	185

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16065]	Myceligenerans halotolerans strain XJEEM 11063 16S ribosomal RNA gene, partial sequence	EU910872	1393	GenBank ENA	552903 tax ID

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GC-content

71.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

DSM 21949, CCTCC AA 208063, JCM 19555, XJEEM 11063, CCTCC AB 208063

[Ref.: #81804]

SI-ID 399269

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Myceligenerans salitolerans sp. nov., a halotolerant actinomycete isolated from a salt lake in Xinjiang, China.	Guan TW, Wu N, Tang SK, Che ZM, Chen XG	Extremophiles	10.1007/s00792-012-0502-8	2012	*
Phylogeny	Myceligenerans halotolerans sp. nov., an actinomycete isolated from a salt lake, and emended description of the genus Myceligenerans.	Wang Y, Tang SK, Li Z, Lou K, Mao PH, Jin X, Klenk HP, Zhang LX, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.024091-0	2010	*

References

#16065

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21949

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21364

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#81804

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399269.1 )

* These data were automatically processed and therefore are not curated

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