Prevotella falsenii (DSM 22864, CCUG 56137, JCM 15124)

Name: Prevotella falsenii (DSM 22864, CCUG 56137, JCM 15124)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12563

Type strain

Strain Designation 04052

Culture col. no. DSM 22864 CCUG 56137 JCM 15124 04052 KCTC 15074

NCBI tax ID(s) 1122983 515414

Special Collections DSMZ CCUG JCM KCTC Literature strains

History <- CCUG <- M. Sakamoto, JCM/RIKEN <- H. Kumada, Kanagawa Dental College, Yokosuka, Japan; 04052 M. Sakamoto 04052 <-- H. Kumada Pi 04052.

Links

Prevotella falsenii 04052 is an anaerobe, Gram-negative, rod-shaped bacterium that was isolated from monkey dental plaque .

Gram-negative rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 397205

JCM 15124,DSM 22864,CCUG 56137

@ref 20215

Last LPSN update 2026-02-09 11:20:52

Domain Bacteria

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Prevotellaceae

Genus Prevotella

Species Prevotella falsenii

Full scientific name Prevotella falsenii Sakamoto et al. 2009

BacDive ID	Other strains from **Prevotella falsenii** (7)	Type strain
161574	P. falsenii JCM 15121
161575	P. falsenii JCM 15122
161576	P. falsenii JCM 15123
161577	P. falsenii JCM 15125
161578	P. falsenii JCM 15126
161579	P. falsenii JCM 15127
161580	P. falsenii JCM 15128

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
28959	negative	1.6 µm	0.65 µm	rod-shaped
68367				rod-shaped		from API 20A
68367	negative					from API 20A
125438					92.5
125438	negative				93.912
125439	negative				99.3

Colony morphology

@ref	Incubation period
16580	1-2 days
60873	2 days

Pigmentation

28959

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16580	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
16580	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)		Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
16580	positive	growth	37
60873	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
16580	anaerobe
28959	anaerobe
60873	anaerobe
125438	anaerobe	90.951

Spore formation

@ref	Confidence
28959
68367		from API 20A
125438	91.856
125439	99.4

Observation

28959

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68367	17057 ChEBI	cellobiose	-	builds acid from	from API 20A
68367	17634 ChEBI	D-glucose	+	builds acid from	from API 20A
68367	16899 ChEBI	D-mannitol	-	builds acid from	from API 20A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68367	16024 ChEBI	D-mannose	+	builds acid from	from API 20A
68367	65327 ChEBI	D-xylose	-	builds acid from	from API 20A
68367	4853 ChEBI	esculin	-	hydrolysis	from API 20A
68367	5291 ChEBI	gelatin	-	hydrolysis	from API 20A
28959	17234 ChEBI	glucose	+	carbon source
68367	17754 ChEBI	glycerol	-	builds acid from	from API 20A
68367	30849 ChEBI	L-arabinose	-	builds acid from	from API 20A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68367	62345 ChEBI	L-rhamnose	-	builds acid from	from API 20A
68367	17716 ChEBI	lactose	-	builds acid from	from API 20A
28959	17306 ChEBI	maltose	+	carbon source
68367	17306 ChEBI	maltose	+	builds acid from	from API 20A
28959	37684 ChEBI	mannose	+	carbon source
68367	6731 ChEBI	melezitose	-	builds acid from	from API 20A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
28959	16634 ChEBI	raffinose	+	carbon source
68367	16634 ChEBI	raffinose	+	builds acid from	from API 20A
68367	17814 ChEBI	salicin	-	builds acid from	from API 20A
68367	30911 ChEBI	sorbitol	-	builds acid from	from API 20A
28959	17992 ChEBI	sucrose	+	carbon source
68367	17992 ChEBI	sucrose	+	builds acid from	from API 20A
68367	27082 ChEBI	trehalose	-	builds acid from	from API 20A
68380	27897 ChEBI	tryptophan	+	energy source	from API rID32A
68367	27897 ChEBI	tryptophan	+	energy source	from API 20A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A
68367	16199 ChEBI	urea	-	hydrolysis	from API 20A

Metabolite production

@ref	Chebi-ID	Metabolite
28959	35581 ChEBI	indole
68380	35581 ChEBI	indole	from API rID32A
68367	35581 ChEBI	indole	from API 20A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
28959	35581 ChEBI	indole	+
68380	35581 ChEBI	indole	+	from API rID32A
68367	35581 ChEBI	indole	+	from API 20A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
28959	alkaline phosphatase	+	3.1.3.1
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	+	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68367	beta-glucosidase	-	3.2.1.21	from API 20A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
16580	catalase	-	1.11.1.6
68367	catalase	-	1.11.1.6	from API 20A
16580	cytochrome-c oxidase	-	1.9.3.1
28959	gelatinase	+
68367	gelatinase	-		from API 20A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	+		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	+	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A
68367	urease	-	3.5.1.5	from API 20A

API 20A

@ref	IND	URE	GLU	MAN	LAC	SAC	MAL	SAL	XYL	ARA	GEL	ESC	GLY	CEL	MNE	MLZ	RAF	SOR	RHA	TRE	CAT	Spores presentSPOR	GramGRAM	Morphology coccus="+" rod="-"COCC
16580	+	-	+	-	-	+	+	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
16580	-	-	-	-	-	+	-	-	-	-	-	+/-	-	+	-	+	+	+	-	-	-	-	-	-	+	-	-	+	-
16580	-	-	-	-	-	+	-	-	-	-	-	+/-	-	+	-	+	+	+	-	-	-	-	-	-	+	-	-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Primates
#Host Body-Site	#Oral cavity and airways	#Plaque
#Host Body-Site	#Oral cavity and airways	#Tooth

Isolation

@ref	Sample type	Sampling date	Country	Country ISO 3 Code	Continent
16580	monkey dental plaque (male long-tailed macaques, 5–6 years old)		Japan	JPN	Asia
60873	Monkey dental plaque	2004-03-01	Japan	JPN	Asia
67770	Monkey dental plaque

Taxonmaps

69479

Global distribution of 16S sequence AB429504 (>99% sequence identity) for Prevotella falsenii subclade from Microbeatlas

Aquatic Samples	17
Soil Samples	21
Animal Samples	3061
Plant Samples	10
Total Samples	3109

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
16580	yes, in single cases	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM61394v1 assembly for Prevotella falsenii DSM 22864 = JCM 15124	contig	GCA_000613945	1122983.7	2585427898	1122983	49.72
66792	Prevotella falsenii JCM 15124	contig		1236505.3		1122983	45.4

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16580	Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 04052 (= JCM 15124)	AB429504	1494		515414

GC content

@ref	GC-content (mol%)	Method
16580	45.2
67770	45.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Prevotella falsenii DSM 22864 = JCM 15124
NCBI: GCA_000613945

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.40	no
125439	motility	BacteriaNetⓘ	no	78.50	no
125439	gram_stain	BacteriaNetⓘ	negative	99.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	71.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prevotella falsenii JCM 15124
PATRIC: 1236505.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	93.91	no
125438	anaerobic	anaerobicⓘ	yes	90.95	yes
125438	spore-forming	spore-formingⓘ	no	91.86	yes
125438	aerobic	aerobicⓘ	no	97.53	no
125438	thermophilic	thermophileⓘ	no	95.95	yes
125438	flagellated	motile2+ⓘ	no	92.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Prevotella aurantiaca sp. nov., isolated from the human oral cavity.	Sakamoto M, Suzuki N, Okamoto M	Int J Syst Evol Microbiol	10.1099/ijs.0.012831-0	2009
Phylogeny	Prevotella falsenii sp. nov., a Prevotella intermedia-like organism isolated from monkey dental plaque.	Sakamoto M, Kumada H, Hamada N, Takahashi Y, Okamoto M, Bakir MA, Benno Y	Int J Syst Evol Microbiol	10.1099/ijs.0.002626-0	2009

References

#16580	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22864
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25396	IJSEM 319 2009 ( DOI 10.1099/ijs.0.002626-0 , PubMed 19196771 )
#28959	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25396
#60873	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56137
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68367	Automatically annotated from API 20A .
#68380	Automatically annotated from API rID32A .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Prevotella falsenii (DSM 22864, CCUG 56137, JCM 15124)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20A

API rID32A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000613945

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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