Neobacillus soli IDA 0086 is a facultative anaerobe, spore-forming, mesophilic prokaryote that forms circular colonies and was isolated from soil, Drentse A agricultural research area.
spore-forming Gram-positive colony-forming facultative anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Cytobacillaceae |
| Genus Neobacillus |
| Species Neobacillus soli |
| Full scientific name Neobacillus soli (Heyrman et al. 2004) Patel and Gupta 2020 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 5924 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 38316 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 122659 | CIP Medium 328 | Medium recipe at CIP | |||
| 122659 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 122659 | NaCl | positive | growth | 0-10 % |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 23312 | 16808 ChEBI | 2-dehydro-D-gluconate | - | builds acid from | |
| 23312 | 17426 ChEBI | 5-dehydro-D-gluconate | - | builds acid from | |
| 23312 | 27613 ChEBI | amygdalin | - | builds acid from | |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 23312 | 18305 ChEBI | arbutin | - | builds acid from | |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 23312 | casein | + | hydrolysis | ||
| 23312 | 17057 ChEBI | cellobiose | - | builds acid from | |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 23312 | 16947 ChEBI | citrate | - | assimilation | |
| 122659 | 16947 ChEBI | citrate | - | carbon source | |
| 23312 | 17108 ChEBI | D-arabinose | - | builds acid from | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 23312 | 18333 ChEBI | D-arabitol | - | builds acid from | |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 23312 | 15824 ChEBI | D-fructose | + | builds acid from | |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 23312 | 28847 ChEBI | D-fucose | - | builds acid from | |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 23312 | 12936 ChEBI | D-galactose | +/- | builds acid from | |
| 23312 | 17634 ChEBI | D-glucose | + | builds acid from | |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 23312 | 62318 ChEBI | D-lyxose | - | builds acid from | |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 23312 | 16899 ChEBI | D-mannitol | - | builds acid from | |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 23312 | 16024 ChEBI | D-mannose | + | builds acid from | |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 23312 | 16988 ChEBI | D-ribose | +/- | builds acid from | |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 23312 | 17924 ChEBI | D-sorbitol | - | builds acid from | |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 23312 | 16443 ChEBI | D-tagatose | - | builds acid from | |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 23312 | 16551 ChEBI | D-trehalose | +/- | builds acid from | |
| 23312 | 65327 ChEBI | D-xylose | - | builds acid from | |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 23312 | 17113 ChEBI | erythritol | - | builds acid from | |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 23312 | 4853 ChEBI | esculin | + | hydrolysis | |
| 122659 | 4853 ChEBI | esculin | + | hydrolysis | |
| 23312 | 16813 ChEBI | galactitol | - | builds acid from | |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 23312 | 5291 ChEBI | gelatin | + | hydrolysis | |
| 23312 | 28066 ChEBI | gentiobiose | - | builds acid from | |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 23312 | 24265 ChEBI | gluconate | - | builds acid from | |
| 23312 | 17754 ChEBI | glycerol | - | builds acid from | |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 23312 | 28087 ChEBI | glycogen | + | builds acid from | |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 122659 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 23312 | 15443 ChEBI | inulin | - | builds acid from | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 23312 | 30849 ChEBI | L-arabinose | - | builds acid from | |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 23312 | 18403 ChEBI | L-arabitol | - | builds acid from | |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 23312 | 18287 ChEBI | L-fucose | - | builds acid from | |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 23312 | 62345 ChEBI | L-rhamnose | - | builds acid from | |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 23312 | 17266 ChEBI | L-sorbose | - | builds acid from | |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 23312 | 65328 ChEBI | L-xylose | - | builds acid from | |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 23312 | 17716 ChEBI | lactose | - | builds acid from | |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 23312 | 17306 ChEBI | maltose | +/- | builds acid from | |
| 23312 | 6731 ChEBI | melezitose | - | builds acid from | |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 23312 | 28053 ChEBI | melibiose | - | builds acid from | |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 23312 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 23312 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 23312 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 23312 | 17268 ChEBI | myo-inositol | - | builds acid from | |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 23312 | 506227 ChEBI | N-acetylglucosamine | + | builds acid from | |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 23312 | 17632 ChEBI | nitrate | + | reduction | |
| 122659 | 17632 ChEBI | nitrate | + | reduction | |
| 122659 | 16301 ChEBI | nitrite | + | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 23312 | 16634 ChEBI | raffinose | - | builds acid from | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 23312 | 15963 ChEBI | ribitol | - | builds acid from | |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 23312 | 17814 ChEBI | salicin | - | builds acid from | |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 23312 | 28017 ChEBI | starch | + | builds acid from | |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 23312 | 17992 ChEBI | sucrose | - | builds acid from | |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 23312 | 32528 ChEBI | turanose | - | builds acid from | |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 23312 | 17151 ChEBI | xylitol | - | builds acid from | |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 122659 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 122659 | amylase | + | ||
| 23312 | arginine dihydrolase | - | 3.5.3.6 | |
| 23312 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 122659 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | + | 3.2.1.31 | from API zym |
| 122659 | caseinase | + | 3.4.21.50 | |
| 122659 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 122659 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 122659 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 122659 | gelatinase | + | ||
| 122659 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 122659 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 23312 | lysine decarboxylase | - | 4.1.1.18 | |
| 122659 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 23312 | ornithine decarboxylase | - | 4.1.1.17 | |
| 122659 | ornithine decarboxylase | - | 4.1.1.17 | |
| 122659 | oxidase | + | ||
| 122659 | protease | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 23312 | tryptophan deaminase | - | 4.1.99.1 | |
| 122659 | tween esterase | - | ||
| 23312 | urease | - | 3.5.1.5 | |
| 122659 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122659 | not determinedn.d. | - | - | - | - | + | - | - | - | - | +/- | + | + | + | - | - | - | - | + | - | - | - | + | - | - | +/- | - | - | +/- | - | - | - | +/- | - | - | - | + | + | - | - | - | - | - | - | - | - | - | +/- | - | - |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | Latitude | Longitude | |
|---|---|---|---|---|---|---|---|---|
| 23312 | soil, Drentse A agricultural research area | Anlooer Diepje brook | Netherlands | NLD | Europe | 53.0333 | 6.68333 53.0333/6.68333 | |
| 5924 | soil | near Anloo | Netherlands | NLD | Europe | |||
| 67770 | Soil in the Drentse A agricultural research area along the Anlooër Diepje brook | Netherlands | NLD | Europe | ||||
| 122659 | Environment, Soil | Netherlands | NLD | Europe |
Global distribution of 16S sequence AJ542513 (>99% sequence identity) for Neobacillus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM233581v1 assembly for Neobacillus soli DSM 15604 | scaffold | 220688 | 72.05 | ||||
| 67770 | ASM159166v1 assembly for Neobacillus soli NBRC 102451 | contig | 1348630 | 49.74 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 23312 | 40.1 | high performance liquid chromatography (HPLC) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 95.50 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 84.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 77.30 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 89.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 70.77 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.92 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 90.89 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 64.29 | no |
| 125438 | thermophilic | thermophileⓘ | no | 92.19 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 61.82 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Comparative Genomics Reveals Evidence of the Genome Reduction and Metabolic Potentials of Aliineobacillus hadale Isolated from Challenger Deep Sediment of the Mariana Trench. | Yang S, Liu J, Liu Y, Wu W, Wang J, Wei Y. | Microorganisms | 10.3390/microorganisms13010132 | 2025 | |
| Genetics | Neobacillus massiliamazoniensis sp. nov., a new bacterial species isolated from stool sample of an inhabitant of the Amazon region. | Mbaye B, Tidjani Alou M, Fadlane A, Fregiere L, Alibar S, Million M, Fenollar F, Lo CI. | New Microbes New Infect | 10.1016/j.nmni.2021.100900 | 2021 | |
| Phylogeny | Neobacillus driksii sp. nov. isolated from a Mars 2020 spacecraft assembly facility and genomic potential for lasso peptide production in Neobacillus. | Hameed A, McDonagh F, Sengupta P, Miliotis G, Sivabalan SKM, Szydlowski L, Simpson A, Singh NK, Rekha PD, Raman K, Venkateswaran K. | Microbiol Spectr | 10.1128/spectrum.01376-24 | 2025 | |
| Phylogeny | Bacillus oryzisoli sp. nov., isolated from rice rhizosphere. | Zhang XX, Gao JS, Zhang L, Zhang CW, Ma XT, Zhang J | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001215 | 2016 | |
| Phylogeny | Bacillus cucumis sp. nov. isolated from the rhizosphere of cucumber (Cucumis sativus). | Kampfer P, Busse HJ, Glaeser SP, Kloepper JW, Hu CH, McInroy JA | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000831 | 2015 | |
| Phylogeny | Bacillus ginsengisoli sp. nov., isolated from soil of a ginseng field. | Nguyen NL, Kim YJ, Hoang VA, Min JW, Liang ZQ, Yang DC | Int J Syst Evol Microbiol | 10.1099/ijs.0.031740-0 | 2012 | |
| Phylogeny | Bacillus herbersteinensis sp. nov. | Wieser M, Worliczek H, Kampfer P, Busse HJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.63660-0 | 2005 | |
| Phylogeny | Bacillus novalis sp. nov., Bacillus vireti sp. nov., Bacillus soli sp. nov., Bacillus bataviensis sp. nov. and Bacillus drentensis sp. nov., from the Drentse A grasslands. | Heyrman J, Vanparys B, Logan NA, Balcaen A, Rodriguez-Diaz M, Felske A, De Vos P | Int J Syst Evol Microbiol | 10.1099/ijs.0.02723-0 | 2004 |
| #5924 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15604 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #23312 | Jeroen Heyrman, Bram Vanparys, Niall A. Logan, An Balcaen, Marina Rodríguez-Díaz, Andreas Felske, Paul De Vos: Bacillus novalis sp. nov., Bacillus vireti sp. nov., Bacillus soli sp. nov., Bacillus bataviensis sp. nov. and Bacillus drentensis sp. nov., from the Drentse A grasslands. IJSEM 54: 47 - 57 2004 ( DOI 10.1099/ijs.0.02723-0 , PubMed 14742458 ) |
| #38316 | ; Curators of the CIP; |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #122659 | Collection of Institut Pasteur ; Curators of the CIP; CIP 108804 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
You found an error in BacDive? Please tell us about it!
Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.
Successfully sent
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive1217.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data