Name: Neobacillus soli IDA 0086
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1217

Type strain:

Species: Neobacillus soli

Strain Designation: IDA 0086, R-16300, ISA0086

Culture col. no.: DSM 15604, CIP 108804, LMG 21838, JCM 21710, IAM 15259, KCTC 13572, NBRC 102451

Strain history: CIP <- 2005, DSMZ <- J Heyman: strain R-16300 <- A. Felske: strain ISA0086

NCBI tax ID(s): 1348630 (strain), 220688 (species)

SI-ID 85442

LMG 21838, DSM 15604, CIP 108804, JCM 21710, NBRC 102451, IAM 15259

Special Collections

Section

Neobacillus soli IDA 0086 is a facultative anaerobe, spore-forming, Gram-positive bacterium that forms circular colonies and was isolated from soil, Drentse A agricultural research area.

colony-forming
Gram-positive
spore-forming
facultative anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Neobacillus*
	Species	**Neobacillus soli**
	Full Scientific Name (LPSN)	Neobacillus soli (Heyrman et al. 2004) Patel and Gupta 2020

Synonym

Bacillus soli

Information on morphological and physiological properties Morphology

[Ref.: #23312]	Gram stain	positive
[Ref.: #23312]	Gram stain	variable
[Ref.: #122659]	Gram stain	positive

[Ref.: #23312]	Cell length	0.6-1.2 µm

[Ref.: #23312]	Cell shape	rod-shaped
[Ref.: #122659]	Cell shape	rod-shaped

[Ref.: #23312]	Motility	yes
[Ref.: #122659]	Motility	yes

[Ref.: #23312]	Colony color	cream
[Ref.: #23312]	Colony shape	circular
[Ref.: #23312]	Cultivation medium used	TSA

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5924]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5924]

Culture medium growth

[Ref.: #5924]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5924]

Culture medium composition

expand / minimize

[Ref.: #38316]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #38316]

Culture medium growth

[Ref.: #38316]

Culture medium composition

expand / minimize

[Ref.: #122659]

Culture medium

CIP Medium 328

[Ref.: #122659]

Culture medium growth

[Ref.: #122659]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #122659]

Culture medium

CIP Medium 72

[Ref.: #122659]

Culture medium growth

[Ref.: #122659]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5924]		growth	30 °C
[Ref.: #23312]		maximum	40-45 °C
[Ref.: #23312]		optimum	30 °C
[Ref.: #38316]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #122659]		growth	10-45 °C
[Ref.: #122659]	no	growth	55 °C

		pH
[Ref.: #23312]	maximum	9.0-9.5
[Ref.: #23312]	minimum	4.0-5.0
[Ref.: #23312]	optimum	7.0-8.0
[Ref.: #122659]	growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23312]	Oxygen tolerance	facultative anaerobe
[Ref.: #122659]	Oxygen tolerance	obligate aerobe

[Ref.: #23312]	Spore description	ellispoidal, paracentral, may swell the sporangia
[Ref.: #23312]	Type of spore	endospore
[Ref.: #23312]	Ability of spore formation	yes
[Ref.: #122659]	Ability of spore formation	yes
[Ref.: #69480]	Ability of spore formation	yes Confidence in %90.891
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #122659]		NaCl		growth	0-10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23312]	2-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23312]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23312]	amygdalin ChEBI	-	builds acid from
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	arbutin ChEBI	-	builds acid from
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	casein	+	hydrolysis
[Ref.: #23312]	cellobiose ChEBI	-	builds acid from
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	citrate ChEBI	-	assimilation
[Ref.: #122659]	citrate ChEBI	-	carbon source
[Ref.: #23312]	D-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-fructose ChEBI	+	builds acid from
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-fucose ChEBI	-	builds acid from
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-galactose ChEBI	+/-	builds acid from
[Ref.: #23312]	D-glucose ChEBI	+	builds acid from
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-lyxose ChEBI	-	builds acid from
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-mannitol ChEBI	-	builds acid from
[Ref.: #68371]	D-mannitol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-mannose ChEBI	+	builds acid from
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-ribose ChEBI	+/-	builds acid from
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-tagatose ChEBI	-	builds acid from
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	D-trehalose ChEBI	+/-	builds acid from
[Ref.: #23312]	D-xylose ChEBI	-	builds acid from
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	erythritol ChEBI	-	builds acid from
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	esculin ChEBI	+	hydrolysis
[Ref.: #122659]	esculin ChEBI	+	hydrolysis
[Ref.: #23312]	galactitol ChEBI	-	builds acid from
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	gelatin ChEBI	+	hydrolysis
[Ref.: #23312]	gentiobiose ChEBI	-	builds acid from
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	gluconate ChEBI	-	builds acid from
[Ref.: #23312]	glycerol ChEBI	-	builds acid from
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	glycogen ChEBI	+	builds acid from
[Ref.: #68371]	glycogen ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #122659]	hippurate ChEBI	+	hydrolysis
[Ref.: #23312]	inulin ChEBI	-	builds acid from
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	L-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	L-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	L-fucose ChEBI	-	builds acid from
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	L-sorbose ChEBI	-	builds acid from
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	L-xylose ChEBI	-	builds acid from
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	lactose ChEBI	-	builds acid from
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	maltose ChEBI	+/-	builds acid from
[Ref.: #23312]	melezitose ChEBI	-	builds acid from
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	melibiose ChEBI	-	builds acid from
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	myo-inositol ChEBI	-	builds acid from
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23312]	nitrate ChEBI	+	reduction
[Ref.: #122659]	nitrate ChEBI	+	reduction
[Ref.: #122659]	nitrite ChEBI	+	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	raffinose ChEBI	-	builds acid from
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	ribitol ChEBI	-	builds acid from
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	salicin ChEBI	-	builds acid from
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	starch ChEBI	+	builds acid from
[Ref.: #68371]	starch ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23312]	sucrose ChEBI	-	builds acid from
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	turanose ChEBI	-	builds acid from
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23312]	xylitol ChEBI	-	builds acid from
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #23312]	acetoin ChEBI	no
[Ref.: #23312]	hydrogen sulfide ChEBI	no
[Ref.: #23312]	indole ChEBI	no
[Ref.: #122659]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #23312]	acetoin ChEBI	-
[Ref.: #122659]	acetoin ChEBI	-
[Ref.: #122659]	glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #122659]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #122659]	amylase	+
[Ref.: #23312]	arginine dihydrolase	-	3.5.3.6
[Ref.: #23312]	beta-galactosidase	-	3.2.1.23
[Ref.: #122659]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #122659]	caseinase	+	3.4.21.50
[Ref.: #122659]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #122659]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #122659]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #122659]	gelatinase	+
[Ref.: #122659]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #122659]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #23312]	lysine decarboxylase	-	4.1.1.18
[Ref.: #122659]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #23312]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122659]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122659]	oxidase	+
[Ref.: #122659]	protease	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #23312]	tryptophan deaminase	-	4.1.99.1
[Ref.: #122659]	tween esterase	-
[Ref.: #23312]	urease	-	3.5.1.5
[Ref.: #122659]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #122659]	11385	not determinedn.d.	-	-	-	-	+	-	-	-	-	+/-	+	+	+	-	-	-	-	+	-	-	-	+	-	-	+/-	-	-	+/-	-	-	-	+/-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	+/-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #122659]	2917	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122659]	11470	-	+	+	+	-	+	-	-	-	+	+	+	-	-	+	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23312]	Sample type/isolated from	soil, Drentse A agricultural research area
[Ref.: #23312]	Geographic location (country and/or sea, region)	Anlooer Diepje brook
[Ref.: #23312]	Country	Netherlands
[Ref.: #23312]	Country ISO 3 Code	NLD
[Ref.: #23312]	Continent	Europe
[Ref.: #23312]	Geographic location	53.0333°/6.6833°

[Ref.: #5924]	Sample type/isolated from	soil
[Ref.: #5924]	Geographic location (country and/or sea, region)	near Anloo
[Ref.: #5924]	Country	Netherlands
[Ref.: #5924]	Country ISO 3 Code	NLD
[Ref.: #5924]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil in the Drentse A agricultural research area along the Anlooër Diepje brook
[Ref.: #67770]	Country	Netherlands
[Ref.: #67770]	Country ISO 3 Code	NLD
[Ref.: #67770]	Continent	Europe

[Ref.: #122659]	Sample type/isolated from	Environment, Soil
[Ref.: #122659]	Country	Netherlands
[Ref.: #122659]	Country ISO 3 Code	NLD
[Ref.: #122659]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	-
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ542513 (>99% sequence identity) for Neobacillus from Microbeatlas

Aquatic Samples	15
Soil Samples	146
Animal Samples	17
Plant Samples	36
Total Samples	214

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5924]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #122659]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23312]	Bacillus soli partial 16S rRNA gene, strain LMG 21838	AJ542513	1441	GenBank ENA	220688 tax ID
[Ref.: #20218]	Bacillus soli gene for 16S rRNA, partial sequence, strain: NBRC 102451	AB681793	1454	GenBank ENA	220688 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Neobacillus soli NBRC 102451	GCA_001591665	contig	GenBank ENA	1348630 tax ID
[Ref.: #67770]	Neobacillus soli DSM 15604	GCA_002335815	scaffold	GenBank ENA	220688 tax ID
[Ref.: #66792]	Bacillus soli NBRC 102451	1348630.3	wgs	PATRIC	1348630 tax ID	*
[Ref.: #66792]	Bacillus soli strain DSM 15604	220688.4	wgs	PATRIC	220688 tax ID	*
[Ref.: #66792]	Bacillus soli NBRC 102451	2731957661	draft	JGI IMG/M	1348630 tax ID	*

[Ref.: #23312]

GC-content

40.1 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Neobacillus soli DSM 15604 NCBI: GCA_002335815.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus soli NBRC 102451 PATRIC: 1348630.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	70.771	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.918	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	90.891	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	64.291	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	92.188	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	61.818	no

Availability in culture collections External links

[Ref.: #5924]

Culture collection no.

DSM 15604, CIP 108804, LMG 21838, JCM 21710, IAM 15259, KCTC 13572, NBRC 102451

[Ref.: #70873]

SI-ID 85442

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus oryzisoli sp. nov., isolated from rice rhizosphere.	Zhang XX, Gao JS, Zhang L, Zhang CW, Ma XT, Zhang J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001215	2016	*
Phylogeny	Bacillus cucumis sp. nov. isolated from the rhizosphere of cucumber (Cucumis sativus).	Kampfer P, Busse HJ, Glaeser SP, Kloepper JW, Hu CH, McInroy JA	Int J Syst Evol Microbiol	10.1099/ijsem.0.000831	2015	*
Phylogeny	Bacillus ginsengisoli sp. nov., isolated from soil of a ginseng field.	Nguyen NL, Kim YJ, Hoang VA, Min JW, Liang ZQ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.031740-0	2012	*
Phylogeny	Bacillus herbersteinensis sp. nov.	Wieser M, Worliczek H, Kampfer P, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.63660-0	2005	*
Phylogeny	Bacillus novalis sp. nov., Bacillus vireti sp. nov., Bacillus soli sp. nov., Bacillus bataviensis sp. nov. and Bacillus drentensis sp. nov., from the Drentse A grasslands.	Heyrman J, Vanparys B, Logan NA, Balcaen A, Rodriguez-Diaz M, Felske A, De Vos P	Int J Syst Evol Microbiol	10.1099/ijs.0.02723-0	2004	*

References

#5924

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15604

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23312

Jeroen Heyrman, Bram Vanparys, Niall A. Logan, An Balcaen, Marina Rodríguez-Díaz, Andreas Felske, Paul De Vos: Bacillus novalis sp. nov., Bacillus vireti sp. nov., Bacillus soli sp. nov., Bacillus bataviensis sp. nov. and Bacillus drentensis sp. nov., from the Drentse A grasslands. IJSEM 54: 47 - 57 2004 ( DOI 10.1099/ijs.0.02723-0 , PubMed 14742458 )

#38316 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70873

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID85442.1 )

#122659 Collection of Institut Pasteur ; Curators of the CIP; CIP 108804
* These data were automatically processed and therefore are not curated

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Neobacillus soli DSM 15604

Bacillus soli NBRC 102451

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