Polyangium sorediatum (DSM 14670, JCM 12637, Pl s12)

Name: Polyangium sorediatum (DSM 14670, JCM 12637, Pl s12)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12037

Type strain

Strain Designation Pl s12

Culture col. no. DSM 14670 JCM 12637 Pl s12

NCBI tax ID(s) 889274

Special Collections DSMZ JCM Reichenbach collection

Links

Polyangium sorediatum Pl s12 is a mesophilic prokaryote that builds a fruiting body and was isolated from soil with decaying plant material.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 358912

DSM 14670,JCM 12637

@ref 20215

Last LPSN update 2025-12-16 09:49:45

Domain Pseudomonadati

Phylum Pseudomonadota

Class Deltaproteobacteria

Order Polyangiales

Family Polyangiaceae

Genus Polyangium

Species Polyangium sorediatum

Full scientific name Polyangium sorediatum (ex Thaxter 1904) Brockman 1989

BacDive ID	Other strains from **Polyangium sorediatum** (20)	Type strain
12038	P. sorediatum Pl s4, DSM 14693
12039	P. sorediatum Pl s2, DSM 53717
12040	P. sorediatum Pl s3, DSM 53718
12041	P. sorediatum Pl s5, DSM 53719
12042	P. sorediatum Pl s6, DSM 53720
12043	P. sorediatum Pl s11, DSM 53721
18195	P. sorediatum Pl sm18,
18196	P. sorediatum Pl sm14,
21503	P. sorediatum Pl sm1,
21506	P. sorediatum Pl sm8,
21507	P. sorediatum Pl sm6,
21508	P. sorediatum Pl sm7,
21510	P. sorediatum Pl sm3,
22698	P. sorediatum Pl sm17,
22700	P. sorediatum Pl sm13,
22702	P. sorediatum Pl sm15,
22704	P. sorediatum Pl sm16,
22713	P. sorediatum Pl sm11,
22716	P. sorediatum Pl sm12,
22741	P. sorediatum Pl sm20,

Morphology

Multicellular morphology

@ref	Forms multicellular complex	Complex name
18281		fruiting body

Multimedia

@ref:	5474
multimedia content:	DSM_14670.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_14670.jpg
caption:	sporangioles consisting of myxospores in agar medium 9
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
5474	VY/2 AGAR (DSMZ Medium 9)		Medium recipe at MediaDive	Name: VY/2 AGAR (DSMZ Medium 9; with strain-specific modifications) Composition: Agar 15.0 g/l Yeast 7.5 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5474	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Decomposing plant

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
5474	soil with decaying plant material	San Diego	USA	USA	North America
67770	Soil with plant residues	CA	USA	USA	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5474	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM2994646v1 assembly for Polyangium sorediatum DSM 14670	contig	GCA_029946465	889274.6	8046702843	889274	38.39
66792	ASM514462v1 assembly for Polyangium sorediatum	contig	GCA_005144625	889274.3		889274

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5474	Polyangium sorediatum strain Pl s12 16S ribosomal RNA gene, complete sequence	GU207880	1552		889274

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Polyangium sorediatum strain DSM 14670
PATRIC: 889274.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	85.48	no
125438	anaerobic	anaerobicⓘ	no	81.52	no
125438	aerobic	aerobicⓘ	yes	79.03	no
125438	spore-forming	spore-formingⓘ	no	73.34	no
125438	thermophilic	thermophileⓘ	no	93.91	yes
125438	flagellated	motile2+ⓘ	no	58.21	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Designation of type strains for seven species of the order Myxococcales and proposal for neotype strains of Cystobacter ferrugineus, Cystobacter minus and Polyangium fumosum.	Lang E, Reichenbach H	Int J Syst Evol Microbiol	10.1099/ijs.0.056440-0	2013

References

#5474	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14670
#18281	Reichenbach, H.: Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ . Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH:
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Polyangium sorediatum (DSM 14670, JCM 12637, Pl s12)

Name and taxonomic classification

Morphology

Multicellular morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_029946465

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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