Pasteurella multocida subsp. septica Souchard is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from human abscess .
Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pasteurellales |
| Family Pasteurellaceae |
| Genus Pasteurella |
| Species Pasteurella multocida subsp. septica |
| Full scientific name Pasteurella multocida subsp. septica Mutters et al. 1985 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 16689 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 38125 | MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicola | Distilled water make up to (1000.000 ml);Yeast extract (1.000 g);Tryptocasein soy agar (40.000 g) | |||
| 121180 | CIP Medium 118-b | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68377 | 17634 ChEBI | D-glucose | + | builds acid from | from API NH |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | + | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68381 | 16988 ChEBI | D-ribose | - | builds acid from | from API rID32STR |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 121180 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 121180 | 17234 ChEBI | glucose | +/- | degradation | |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68381 | 17306 ChEBI | maltose | - | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 121180 | 17632 ChEBI | nitrate | + | reduction | |
| 121180 | 17632 ChEBI | nitrate | + | respiration | |
| 121180 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68377 | 17992 ChEBI | sucrose | + | builds acid from | from API NH |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 121180 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | from API rID32STR | |
| 121180 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68381 | alkaline phosphatase | + | 3.1.3.1 | from API rID32STR |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 121180 | beta-galactosidase | - | 3.2.1.23 | |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 68377 | beta-galactosidase | - | 3.2.1.23 | from API NH |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 121180 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68377 | lipase | + | from API NH | |
| 68382 | lipase (C 14) | - | from API zym | |
| 121180 | lysine decarboxylase | - | 4.1.1.18 | |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 121180 | ornithine decarboxylase | + | 4.1.1.17 | |
| 121180 | oxidase | + | ||
| 68377 | proline-arylamidase | - | 3.4.11.5 | from API NH |
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 121180 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121180 | not determinedn.d. | +/- | - | - | - | + | + | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | - | - | - | - | +/- | - | - | + | + | - | - | - | - | - | - | - | +/- | + | - | - | +/- | - | - | +/- | - | +/- |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46725 | - | - | - | - | - | + | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.14 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 87.86 | no |
| 125439 | motility | BacteriaNetⓘ | no | 73.90 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.60 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.38 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 92.54 | no |
| 125438 | aerobic | aerobicⓘ | no | 82.49 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 92.66 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Virulence-associated Genome Sequences of Pasteurella canis and Unique Toxin Gene Prevalence of P. canis and Pasteurella multocida Isolated from Humans and Companion Animals. | Yoshida H, Kim JM, Maeda T, Goto M, Tsuyuki Y, Shibata S, Shizuno K, Okuzumi K, Kim JS, Takahashi T. | Ann Lab Med | 10.3343/alm.2023.43.3.263 | 2023 | |
| Enzymology | Rapid and accurate identification of human isolates of Pasteurella and related species by sequencing the sodA gene. | Gautier AL, Dubois D, Escande F, Avril JL, Trieu-Cuot P, Gaillot O. | J Clin Microbiol | 10.1128/jcm.43.5.2307-2314.2005 | 2005 | |
| Phylogeny | Development of a multiplex PCR assay for the detection of key genes associated with Pasteurella multocida subspecies. | Ujvari B, Gantelet H, Magyar T. | J Vet Diagn Invest | 10.1177/10406387211063438 | 2022 | |
| Investigation of genetic diversity and epidemiological characteristics of Pasteurella multocida isolates from poultry in southwest China by population structure, multi-locus sequence typing and virulence-associated gene profile analysis. | Li Z, Cheng F, Lan S, Guo J, Liu W, Li X, Luo Z, Zhang M, Wu J, Shi Y. | J Vet Med Sci | 10.1292/jvms.18-0049 | 2018 | ||
| Evaluation of a multiplex real-time PCR for detection of four bacterial agents commonly associated with bovine respiratory disease in bronchoalveolar lavage fluid. | Wisselink HJ, Cornelissen JBWJ, van der Wal FJ, Kooi EA, Koene MG, Bossers A, Smid B, de Bree FM, Antonis AFG. | BMC Vet Res | 10.1186/s12917-017-1141-1 | 2017 | ||
| Enzymology | Mycoplasma detection by triplex real-time PCR in bronchoalveolar lavage fluid from bovine respiratory disease complex cases. | Cornelissen JB, de Bree FM, van der Wal FJ, Kooi EA, Koene MG, Bossers A, Smid B, Antonis AF, Wisselink HJ. | BMC Vet Res | 10.1186/s12917-017-1023-6 | 2017 | |
| Enzymology | Development of PCR assays for species- and type-specific identification of Pasteurella multocida isolates. | Townsend KM, Frost AJ, Lee CW, Papadimitriou JM, Dawkins HJ. | J Clin Microbiol | 10.1128/jcm.36.4.1096-1100.1998 | 1998 | |
| Genetics | Pasteurella multocida genome assembly of Indonesian local isolates using long-read Oxford Nanopore Technology sequencing. | Prihandani SS, Wayan Teguh Wibawan I, Noor SM, Safika S, Khairullah AR, Susanti S, Wahyuwardani S, Andriani A, Sumarningsih S, Kurnianto H, Ariyanti T, Adinata Y, Nuradji H, Puarada ARR. | Open Vet J | 10.5455/ovj.2025.v15.i6.46 | 2025 | |
| Pathogenicity | Establishment of a Multilocus Sequence Typing Scheme for Pasteurella canis Using Isolates from Infected Humans and Diseased Companion Animals. | Yoshida H, Kim JS, Maeda T, Goto M, Tsuyuki Y, Shizuno K, Takahashi T. | Ann Lab Med | 10.3343/alm.2024.0501 | 2025 | |
| Phenotypic and Genotypic Traits of Pasteurella multocida subsp. septica Isolates From the Wounds of Two Patients Due to Dog or Cat Biting, 2023. | Taniyama D, Maeda T, Yokozawa T, Takano A, Oda T, Li S, Yoshida H, Takahashi T. | Cureus | 10.7759/cureus.42640 | 2023 | ||
| Genetics | Pathogenomic analysis and characterization of Pasteurella multocida strains recovered from human infections. | Smallman TR, Perlaza-Jimenez L, Wang X, Korman TM, Kotsanas D, Gibson JS, Turni C, Harper M, Boyce JD. | Microbiol Spectr | 10.1128/spectrum.03805-23 | 2024 | |
| Enzymology | Immunohistochemical and molecular analysis of Pasteurella multocida in a rabbit with suppurative pleuropneumonia. | Uenoyama K, Ueno Y, Tosaki K, Abeto Y, Ito H, Katsuda K, Shibahara T. | J Vet Med Sci | 10.1292/jvms.19-0561 | 2020 | |
| Molecular identification and epidemiological tracing of Pasteurella multocida meningitis in a baby. | Boerlin P, Siegrist HH, Burnens AP, Kuhnert P, Mendez P, Pretat G, Lienhard R, Nicolet J. | J Clin Microbiol | 10.1128/jcm.38.3.1235-1237.2000 | 2000 |
| #16689 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23071 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #38125 | ; Curators of the CIP; |
| #46725 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 17977 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68377 | Automatically annotated from API NH . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #121180 | Collection of Institut Pasteur ; Curators of the CIP; CIP A125 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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