Name: Pasteurella multocida subsp. gallicida IV-739
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11737

Type strain:

Species: Pasteurella multocida subsp. gallicida

Strain Designation: IV-739, 739

Culture col. no.: DSM 23120, ATCC 51689, CCM 4730, CCUG 17978, CIP 103285, NCTC 10204

Strain history: CIP <- 1989, NCTC <- 1960, R.S. Roberts, Runcorn, Cheshire, UK: strain 739

NCBI tax ID(s): 123812 (subspecies)

SI-ID 43125

ATCC 51689, NCTC 10204, CCUG 17978, CIP 103285, CCM 4730, DSM 23120

Special Collections

Other strains from Pasteurella multocida subsp. gallicida

Section

Pasteurella multocida subsp. gallicida IV-739 is an aerobe, Gram-negative bacterium that was isolated from bovine.

Gram-negative
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pasteurellales*
	Family	*Pasteurellaceae*
	Genus	*Pasteurella*
	Species	**Pasteurella multocida subsp. gallicida**
	Full Scientific Name (LPSN)	Pasteurella multocida subsp. gallicida Mutters et al. 1985

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %98.604

[Ref.: #69480]	Motility	no Confidence in %92.158

[Ref.: #16718]

Type of hemolysis

gamma

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16718]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #16718]

Culture medium growth

[Ref.: #16718]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16718]

Culture medium composition

expand / minimize

[Ref.: #40588]

Culture medium

MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicola

[Ref.: #40588]

Culture medium growth

[Ref.: #40588]

Culture medium composition

expand / minimize

[Ref.: #121181]

Culture medium

CIP Medium 118-b

[Ref.: #121181]

Culture medium growth

[Ref.: #121181]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #16718]	growth	37 °C
[Ref.: #40588]	growth	37 °C
[Ref.: #46726]	growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #46726]

Oxygen tolerance

aerobe

[Ref.: #69480]	Ability of spore formation	no Confidence in %92.497
[Ref.: #69481]	Ability of spore formation	no Confidence in %96

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68377]	D-glucose ChEBI	+	builds acid from	* from API NH
[Ref.: #68377]	sucrose ChEBI	+	builds acid from	* from API NH
[Ref.: #68377]	tryptophan ChEBI	+	energy source	* from API NH
[Ref.: #68377]	urea ChEBI	-	hydrolysis	* from API NH

	Metabolite production	Metabolite	Production
[Ref.: #68377]		indole ChEBI	yes	* from API NH

	Physiological tests	Metabolite	Indole test
[Ref.: #68377]		indole ChEBI	+	* from API NH

	Enzyme	Enzyme activity	EC number
[Ref.: #68377]	beta-galactosidase	-	3.2.1.23	* from API NH
[Ref.: #68377]	beta-lactamase	+	3.5.2.6	* from API NH
[Ref.: #16718]	catalase	+	1.11.1.6
[Ref.: #16718]	cytochrome-c oxidase	+	1.9.3.1
[Ref.: #68377]	proline-arylamidase	-	3.4.11.5	* from API NH
[Ref.: #68377]	tryptophan deaminase	+	4.1.99.1	* from API NH
[Ref.: #68377]	urease	-	3.5.1.5	* from API NH

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #16718]	6191	+	+	-	+	+	-	-	+	-	-	-	+	+
[Ref.: #16718]	5681	+	+	+	-	+	+	-	-	+	-	-	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16718]	Sample type/isolated from	bovine
[Ref.: #16718]	Country	United Kingdom
[Ref.: #16718]	Country ISO 3 Code	GBR
[Ref.: #16718]	Continent	Europe

[Ref.: #46726]	Sample type/isolated from	Bovine
[Ref.: #46726]	Country	United Kingdom
[Ref.: #46726]	Country ISO 3 Code	GBR
[Ref.: #46726]	Continent	Europe

[Ref.: #121181]	Sample type/isolated from	Animal, Bovine
[Ref.: #121181]	Country	United Kingdom
[Ref.: #121181]	Country ISO 3 Code	GBR
[Ref.: #121181]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host

#Mammals

#Bovinae (Cow, Cattle)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY078998 (>99% sequence identity) for Pasteurella multocida subclade from Microbeatlas

Aquatic Samples	911
Soil Samples	516
Animal Samples	27398
Plant Samples	119
Total Samples	28944

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16718]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #121181]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16718]	Pasteurella multocida subsp. gallicida 16S ribosomal RNA gene, partial sequence	AF294412	1363	GenBank ENA	123812 tax ID
[Ref.: #20218]	Pasteurella multocida subsp. gallicida strain NCTC 10204 16S ribosomal RNA gene, partial sequence	AY078998	1468	GenBank ENA	123812 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pasteurella multocida subsp. gallicida NCTC10204	GCA_900636625	complete	GenBank ENA	123812 tax ID	*
[Ref.: #66792]	Pasteurella multocida ATCC 51689	GCA_900115485	scaffold	GenBank ENA	747 tax ID	*
[Ref.: #66792]	Pasteurella multocida strain ATCC 51689	747.327	wgs	PATRIC	747 tax ID	*
[Ref.: #66792]	Pasteurella multocida subsp. gallicida strain NCTC10204	123812.3	complete	PATRIC	123812 tax ID	*
[Ref.: #66792]	Pasteurella multocida ATCC 51689	2684623041	draft	JGI IMG/M	747 tax ID	*

[Ref.: #16718]

GC-content

41.2 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pasteurella multocida subsp. gallicida strain NCTC10204 PATRIC: 123812.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	96	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pasteurella multocida subsp. gallicida NCTC10204 NCBI: GCA_900636625.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.604	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.382	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	82.343	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	92.497	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	92.158	no

Availability in culture collections External links

[Ref.: #16718]

Culture collection no.

DSM 23120, ATCC 51689, CCM 4730, CCUG 17978, CIP 103285, NCTC 10204

[Ref.: #80956]

SI-ID 43125

References

#16718

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23120

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40588 ; Curators of the CIP;
#46726 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 17978

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68377

Automatically annotated from API NH .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#80956

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID43125.1 )

#121181 Collection of Institut Pasteur ; Curators of the CIP; CIP 103285
* These data were automatically processed and therefore are not curated

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Pasteurella multocida subsp. gallicida strain NCTC10204

Pasteurella multocida subsp. gallicida NCTC10204

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