Name: Actinobacillus arthritidis P. 907
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11688

Type strain:

Species: Actinobacillus arthritidis

Strain Designation: P. 907

Culture col. no.: DSM 22258, ATCC 13376, CCUG 24862, CIP 107664, MCCM 00398, CCM 5500, Wetmore 1706, HIM 1034-2

Strain history: CIP <- 2002, CCUG <- R. Mutters, Marburg, Germany <- A.S. Browne <- P.W. Wetmore

NCBI tax ID(s): 157339 (species)

SI-ID 46502

ATCC 13376, CCUG 24862, CCM 5500, CCUG 37211, CIP 107664

Special Collections

Section

Actinobacillus arthritidis P. 907 is a microaerophile, Gram-negative, rod-shaped animal pathogen that was isolated from horse joint.

Gram-negative
rod-shaped
animal pathogen
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pasteurellales*
	Family	*Pasteurellaceae*
	Genus	*Actinobacillus*
	Species	**Actinobacillus arthritidis**
	Full Scientific Name (LPSN)	Actinobacillus arthritidis Christensen et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #116510]	Gram stain	negative

[Ref.: #116510]	Cell shape	rod-shaped

[Ref.: #116510]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16240]

Culture medium

BHI MEDIUM (DSMZ Medium 215)

[Ref.: #16240]

Culture medium growth

[Ref.: #16240]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16240]

Culture medium composition

expand / minimize

[Ref.: #41663]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #41663]

Culture medium growth

[Ref.: #41663]

Culture medium composition

expand / minimize

[Ref.: #116510]

Culture medium

CIP Medium 72

[Ref.: #116510]

Culture medium growth

[Ref.: #116510]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #16240]		growth	37 °C
[Ref.: #41663]		growth	37 °C
[Ref.: #48071]		growth	37 °C
[Ref.: #116510]		growth	25-41 °C
[Ref.: #116510]	no	growth	15 °C
[Ref.: #116510]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #48071]

Oxygen tolerance

microaerophile

[Ref.: #69480]

Ability of spore formation

no Confidence in %94.788

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68377]	D-fructose ChEBI	+	builds acid from	* from API NH
[Ref.: #68377]	D-glucose ChEBI	+	builds acid from	* from API NH
[Ref.: #116510]	esculin ChEBI	-	hydrolysis
[Ref.: #116510]	hippurate ChEBI	+	hydrolysis
[Ref.: #68377]	maltose ChEBI	+	builds acid from	* from API NH
[Ref.: #116510]	nitrate ChEBI	+	reduction
[Ref.: #116510]	nitrite ChEBI	+	reduction
[Ref.: #68377]	tryptophan ChEBI	-	energy source	* from API NH

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #116510]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #116510]		indole ChEBI	no
[Ref.: #68377]		indole ChEBI	no	* from API NH

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #116510]		acetoin ChEBI	-
[Ref.: #68377]		indole ChEBI		-	* from API NH

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116510]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68377]	alkaline phosphatase	+	3.1.3.1	* from API NH, API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #116510]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116510]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #116510]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116510]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116510]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116510]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68377]	tryptophan deaminase	-	4.1.99.1	* from API NH
[Ref.: #116510]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #16240]	6163	+	+	+	+	-	+	-	+	+	-	+	-	-
[Ref.: #16240]	5709	-	+	+	+	+	-	+	-	+	+	-	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116510]	10549	-	+	-	-	-	-	-	-	-	-	+	+	-	+	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16240]	Sample type/isolated from	horse joint
[Ref.: #16240]	Country	Czech Republic
[Ref.: #16240]	Country ISO 3 Code	CZE
[Ref.: #16240]	Continent	Europe

[Ref.: #48071]	Sample type/isolated from	Horse joint
[Ref.: #48071]	Country	Czech Republic
[Ref.: #48071]	Country ISO 3 Code	CZE
[Ref.: #48071]	Continent	Europe

[Ref.: #116510]	Sample type/isolated from	Animal, Horse joint
[Ref.: #116510]	Country	Czech Republic
[Ref.: #116510]	Country ISO 3 Code	CZE
[Ref.: #116510]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Equidae (Horse)
#Host Body-Site	#Limb	#Joint

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence L06084 (>99% sequence identity) for Actinobacillus arthritidis subclade from Microbeatlas

Aquatic Samples
Soil Samples
Animal Samples	14
Plant Samples
Total Samples	14

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16240]	Pathogenicity (animal)	yes
[Ref.: #16240]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #116510]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16240]	Actinobacillus arthritidis strain CCUG 24862 16S ribosomal RNA gene, partial sequence	AY362929	1362	GenBank ENA	157339 tax ID
[Ref.: #16240]	Actinobacillus sp. CCUG 24862 16S ribosomal RNA gene, partial sequence	AF247712	1461	GenBank ENA	157339 tax ID
[Ref.: #20218]	Actinobacillus sp. CCUG 24862 partial 16S rRNA gene, strain CCUG 24862	AJ438673	435	GenBank ENA	157339 tax ID	*
[Ref.: #20218]	Actinobacillus arthritidis CCUG:24862 16S ribosomal RNA gene, partial sequence	L06084	1485	GenBank ENA	157339 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Actinobacillus arthritidis CCUG24862	GCA_029774155	complete	GenBank ENA	157339 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinobacillus arthritidis CCUG24862 NCBI: GCA_029774155.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	78.027	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	71.47	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	90.997	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	94.788	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.677	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	81.292	no

Availability in culture collections External links

[Ref.: #16240]

Culture collection no.

DSM 22258, ATCC 13376, CCUG 24862, CIP 107664, MCCM 00398, CCM 5500, Wetmore 1706, HIM 1034-2

[Ref.: #80908]

SI-ID 46502

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Final classification of Bisgaard taxon 9 as Actinobacillus arthritidis sp. nov. and recognition of a novel genomospecies for equine strains of Actinobacillus lignieresii.	Christensen H, Bisgaard M, Angen O, Olsen JE	Int J Syst Evol Microbiol	10.1099/00207713-52-4-1239	2002	*

References

#16240

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22258

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#41663 ; Curators of the CIP;
#48071 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 24862

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68377

Automatically annotated from API NH .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#80908

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46502.1 )

#116510 Collection of Institut Pasteur ; Curators of the CIP; CIP 107664
* These data were automatically processed and therefore are not curated

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Actinobacillus arthritidis CCUG24862

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