Name: Nocardia farcinica S390
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 10665

Type strain:

Species: Nocardia farcinica

Strain Designation: S390, Noc. 1

Culture col. no.: DSM 43244, ATCC 6864, DSM 43667, IMET 7019, NCTC 1935

Strain history: <- NCTC (Actinomyces sumatrae) <- E.P. Snijders, Noc. 1 (Nocardia cuniculi)

NCBI tax ID(s): 37329 (species)

SI-ID 34799

ATCC 6864, NCTC 1935, DSM 43244, IMET 7019

Special Collections

DSMZ

Other strains from Nocardia farcinica

Section

Nocardia farcinica S390 is a human pathogen that was isolated from rabbit.

human pathogen
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia farcinica**
	Full Scientific Name (LPSN)	Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10900]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10900]

Culture medium growth

[Ref.: #10900]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10900]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10900]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10900]	Sample type/isolated from	rabbit
[Ref.: #10900]	Geographic location (country and/or sea, region)	Sumatra
[Ref.: #10900]	Country	Malaysia
[Ref.: #10900]	Country ISO 3 Code	MYS
[Ref.: #10900]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host

#Mammals

#Leporidae (Rabbit/Hare)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10900]	Pathogenicity (human)	yes
[Ref.: #10900]	Pathogenicity (animal)	yes
[Ref.: #10900]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Nocardia farcinica strain DSM 43244 note copy 1 rrnC operon, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536438	345	GenBank ENA	37329 tax ID	*
[Ref.: #20218]	Nocardia farcinica strain DSM 43244 note copy 2 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536439	345	GenBank ENA	37329 tax ID	*
[Ref.: #20218]	Nocardia farcinica strain DSM 43244 note copy 3 rrnA operon, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536440	332	GenBank ENA	37329 tax ID	*
[Ref.: #124043]	Nocardia farcinica strain DSM 43244 16S ribosomal RNA gene, partial sequence.	MW563844	1412	GenBank ENA	37329 tax ID	*

Availability in culture collections External links

[Ref.: #10900]

Culture collection no.

DSM 43244, ATCC 6864, DSM 43667, IMET 7019, NCTC 1935

[Ref.: #79935]

SI-ID 34799

References

#10900

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43244

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#79935

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID34799.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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