Name: Nocardia farcinica S644
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 10664

Type strain:

Species: Nocardia farcinica

Strain Designation: S644

Culture col. no.: DSM 43131, LBG A 3052, NCTC 6761, CCUG 222, ETH 27045

Strain history: <- L. Ettlinger, LBG <- R. Hütter, ETH <- R.E. Gordon

NCBI tax ID(s): 37329 (species)

SI-ID 50183

CCUG 222, NCTC 6761, DSM 43131

Special Collections

DSMZ
CCUG

Other strains from Nocardia farcinica

Section

Nocardia farcinica S644 is a human pathogen of the family Nocardiaceae.

human pathogen
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia farcinica**
	Full Scientific Name (LPSN)	Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10792]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10792]

Culture medium growth

[Ref.: #10792]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10792]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10792]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #44144]

Fatty acid	Percentage	ECL
C16:1 ω7c/C15:0 ISO 2OH	37.1	15.85
C16:0	27.2	16
TBSA 10Me18:0	21.6	18.392
C18:0	6	18
C18:1 ω9c	5.1	17.769
C18:2 ω6,9c/C18:0 ANTE	3.1	17.724

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #44144]	Sampling date	1944
[Ref.: #44144]	Geographic location (country and/or sea, region)	North Carolina
[Ref.: #44144]	Country	USA
[Ref.: #44144]	Country ISO 3 Code	USA
[Ref.: #44144]	Continent	North America
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10792]	Pathogenicity (human)	yes
[Ref.: #10792]	Pathogenicity (animal)	yes
[Ref.: #10792]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Nocardia farcinica strain DSM 43131 note copy 1 rrnC operon, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536435	325	GenBank ENA	37329 tax ID	*
[Ref.: #20218]	Nocardia farcinica strain DSM 43131 note copy 2 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536436	305	GenBank ENA	37329 tax ID	*
[Ref.: #20218]	Nocardia farcinica strain DSM 43131 note copy 3 rrnA operon, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536437	332	GenBank ENA	37329 tax ID	*
[Ref.: #124043]	Nocardia farcinica strain DSM 43131 16S ribosomal RNA gene, partial sequence.	MW563845	1348	GenBank ENA	37329 tax ID	*

Availability in culture collections External links

[Ref.: #10792]

Culture collection no.

DSM 43131, LBG A 3052, NCTC 6761, CCUG 222, ETH 27045

[Ref.: #79934]

SI-ID 50183

References

#10792

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43131

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#44144 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 222

#79934

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID50183.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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