Neisseria meningitidis 21 is a microaerophile, Gram-negative, coccus-shaped bacterium that was isolated from spinal fluid from fatal case of meningitis.
Gram-negative coccus-shaped microaerophile genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Neisseriales |
| Family Neisseriaceae |
| Genus Neisseria |
| Species Neisseria meningitidis |
| Full scientific name Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 3758 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 37616 | MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml) | |||
| 120893 | CIP Medium 10 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | - | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 120893 | 17632 ChEBI | nitrate | - | reduction | |
| 68369 | 17632 ChEBI | nitrate | - | reduction | from API 20NE |
| 120893 | 16301 ChEBI | nitrite | + | reduction | |
| 68377 | 18257 ChEBI | ornithine | - | degradation | from API NH |
| 68377 | 27897 ChEBI | tryptophan | - | energy source | from API NH |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68377 | 16199 ChEBI | urea | - | hydrolysis | from API NH |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68377 | alkaline phosphatase | - | 3.1.3.1 | from API NH |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68377 | beta-galactosidase | - | 3.2.1.23 | from API NH |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 3758 | catalase | + | 1.11.1.6 | |
| 120893 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 3758 | cytochrome-c oxidase | + | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68377 | lipase | - | from API NH | |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 68377 | ornithine decarboxylase | - | 4.1.1.17 | from API NH |
| 120893 | oxidase | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68377 | tryptophan deaminase | - | 4.1.99.1 | from API NH |
| 120893 | urease | - | 3.5.1.5 | |
| 68377 | urease | - | 3.5.1.5 | from API NH |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
| @ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3758 | - | + | - | + | - | - | - | - | - | - | - | + | - | |
| 3758 | + | - | + | - | - | - | - | - | - | - | + | - | - | |
| 3758 | + | - | + | - | - | - | - | - | - | - | + | - | - | |
| 3758 | + | - | + | - | - | - | - | - | - | - | + | - | - | |
| 3758 | + | - | +/- | - | - | - | - | - | - | - | + | - | - | |
| 3758 | + | - | - | - | - | - | - | - | - | - | +/- | - | - | |
| 3758 | +/- | - | +/- | +/- | - | - | - | - | - | - | + | - | - | |
| 3758 | - | + | - | + | - | - | - | - | - | - | - | + | - | |
| 3758 | - | + | - | + | - | - | - | - | - | - | - | + | - | |
| 3758 | - | + | - | +/- | - | - | - | - | - | - | - | + | - | |
| 3758 | - | + | - | - | - | - | - | - | - | - | - | +/- | - | |
| 3758 | - | + | - | + | - | - | - | - | - | - | - | + | - | |
| 3758 | - | +/- | - | +/- | +/- | - | - | - | - | - | - | + | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Infection | #Disease | #Meningitis | |
| #Host Body Product | #Fluids | #Cerebrospinal fluid |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | Latitude | Longitude | Sampling date | Isolation date | |
|---|---|---|---|---|---|---|---|---|---|---|
| 3758 | spinal fluid from fatal case of meningitis | Chicago | USA | USA | North America | 41.8818 | -87.6232 41.8818/-87.6232 | |||
| 44624 | Human cerebrospinal fluid,fatal meningitis | Chicago | USA | USA | North America | 1937 | ||||
| 67770 | Spinal fluid from fatal case of meningitis | Chicago, IL | USA | USA | North America | |||||
| 120893 | Cerebrospinal fluid | Chicago, Illinois | United States of America | USA | North America | 1937 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM2286964v1 assembly for Neisseria meningitidis PartJ-Nmeningitidis-RM8376 | complete | 487 | 99.1 | ||||
| 66792 | 58116_A01 assembly for Neisseria meningitidis NCTC10025 | complete | 487 | 98.38 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.50 | no |
| 125439 | motility | BacteriaNetⓘ | no | 78.60 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 83.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 96.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.50 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.06 | yes |
| 125438 | aerobic | aerobicⓘ | no | 61.37 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 94.41 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 88.44 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Pathogenicity | High-resolution taxonomic examination of the oral microbiome after oil pulling with standardized sunflower seed oil and healthy participants: a pilot study. | Griessl T, Zechel-Gran S, Olejniczak S, Weigel M, Hain T, Domann E. | Clin Oral Investig | 10.1007/s00784-020-03582-0 | 2021 | |
| Enzymology | Evaluation of a novel real-time PCR test based on the ssrA gene for the identification of group B streptococci in vaginal swabs. | Wernecke M, Mullen C, Sharma V, Morrison J, Barry T, Maher M, Smith T. | BMC Infect Dis | 10.1186/1471-2334-9-148 | 2009 | |
| Phylogeny | Duplex quantitative real-time PCR assay for the detection and discrimination of the eggs of Toxocara canis and Toxocara cati (Nematoda, Ascaridoidea) in soil and fecal samples. | Durant JF, Irenge LM, Fogt-Wyrwas R, Dumont C, Doucet JP, Mignon B, Losson B, Gala JL. | Parasit Vectors | 10.1186/1756-3305-5-288 | 2012 | |
| Enzymology | Comparison of hand-held test kits, immunofluorescence microscopy, enzyme-linked immunosorbent assay, and flow cytometric analysis for rapid presumptive identification of Yersinia pestis. | Tomaso H, Thullier P, Seibold E, Guglielmo V, Buckendahl A, Rahalison L, Neubauer H, Scholz HC, Splettstoesser WD. | J Clin Microbiol | 10.1128/jcm.00458-07 | 2007 | |
| The lack of specificity of sodC-based PCR for the detection of Neisseria meningitidis carriage in pharyngeal swabs from adolescents. | Pham-Tran DD, Leong LEX, McMillan M, Lawrence A, Mohammed H, Finn A, Marshall HS. | Microbiol Spectr | 10.1128/spectrum.02779-24 | 2025 | ||
| Expanded Gram-Negative Activity of Marinopyrrole A. | Euteneuer CF, Davis BN, Lui LM, Neville AJ, Davis PH. | Pathogens | 10.3390/pathogens14030290 | 2025 | ||
| In vitro susceptibility of Neisseria gonorrhoeae to netilmicin and etimicin in comparison to gentamicin and other aminoglycosides. | Gross S, Herren S, Gysin M, Rominski A, Roditscheff A, Risch M, Imkamp F, Crich D, Hobbie SN. | Eur J Clin Microbiol Infect Dis | 10.1007/s10096-024-04782-2 | 2024 | ||
| Potential cannabidiol (CBD) repurposing as antibacterial and promising therapy of CBD plus polymyxin B (PB) against PB-resistant gram-negative bacilli. | Abichabki N, Zacharias LV, Moreira NC, Bellissimo-Rodrigues F, Moreira FL, Benzi JRL, Ogasawara TMC, Ferreira JC, Ribeiro CM, Pavan FR, Pereira LRL, Brancini GTP, Braga GUL, Zuardi AW, Hallak JEC, Crippa JAS, Lanchote VL, Canton R, Darini ALC, Andrade LN. | Sci Rep | 10.1038/s41598-022-10393-8 | 2022 | ||
| COMPARISON OF METHODS TO IDENTIFY Neisseria meningitidis IN ASYMPTOMATIC CARRIERS. | Rizek CF, Luiz AM, Assis GR, Costa SF, Levin AS, Lopes MH. | Rev Inst Med Trop Sao Paulo | 10.1590/s1678-9946201658060 | 2016 | ||
| Enzymology | Comparison of PCR-based methods for the simultaneous detection of Neisseria meningitidis, Haemophilus influenzae, and Streptococcus pneumoniae in clinical samples. | de Filippis I, de Andrade CF, Caldeira N, de Azevedo AC, de Almeida AE. | Braz J Infect Dis | 10.1016/j.bjid.2016.04.005 | 2016 | |
| Enzymology | Alternative Molecular Methods for Improved Detection of Meningococcal Carriage and Measurement of Bacterial Density. | Manigart O, Okeakpu J, Odutola A, Jarju S, Foster-Nyarko E, Diallo K, Roca A, Kampmann B, D'Alessandro U, Sow S, Antonio M, Maiden MJ, Borrow R, Stuart JM, Trotter CL, Greenwood BM. | J Clin Microbiol | 10.1128/jcm.01428-16 | 2016 | |
| Enzymology | Description of an unusual Neisseria meningitidis isolate containing and expressing Neisseria gonorrhoeae-Specific 16S rRNA gene sequences. | Walcher M, Skvoretz R, Montgomery-Fullerton M, Jonas V, Brentano S. | J Clin Microbiol | 10.1128/jcm.00309-13 | 2013 | |
| Phylogeny | Superior sensitivity and decreased time to detection with the Bactec Peds Plus/F system compared to the BacT/Alert Pediatric FAN blood culture system. | Sullivan KV, Turner NN, Lancaster DP, Shah AR, Chandler LJ, Friedman DF, Blecker-Shelly DL. | J Clin Microbiol | 10.1128/jcm.02205-13 | 2013 | |
| Enzymology | Bacterial etiology of ocular and periocular infections, antimicrobial susceptibility profile and associated factors among patients attending eye unit of Shashemene comprehensive specialized hospital, Shashemene, Ethiopia. | Mohammed AA, Ali MM, Zenebe MH. | BMC Ophthalmol | 10.1186/s12886-020-01398-w | 2020 | |
| MALDI-TOF mass spectrometry proteomic based identification of clinical bacterial isolates. | Panda A, Kurapati S, Samantaray JC, Srinivasan A, Khalil S. | Indian J Med Res | 2014 | |||
| The Antimicrobial Properties of Cannabis and Cannabis-Derived Compounds and Relevance to CB2-Targeted Neurodegenerative Therapeutics. | Hong H, Sloan L, Saxena D, Scott DA. | Biomedicines | 10.3390/biomedicines10081959 | 2022 | ||
| Phenotype | CRAMP deficiency leads to a pro-inflammatory phenotype and impaired phagocytosis after exposure to bacterial meningitis pathogens. | Kress E, Merres J, Albrecht LJ, Hammerschmidt S, Pufe T, Tauber SC, Brandenburg LO. | Cell Commun Signal | 10.1186/s12964-017-0190-1 | 2017 | |
| Transcriptome | Rapid pathogen identification using a novel microarray-based assay with purulent meningitis in cerebrospinal fluid. | Hou Y, Zhang X, Hou X, Wu R, Wang Y, He X, Wang L, Wang Z. | Sci Rep | 10.1038/s41598-018-34051-0 | 2018 | |
| Frequency of Pathogenic Paediatric Bacterial Meningitis in Mozambique: The Critical Role of Multiplex Real-Time Polymerase Chain Reaction to Estimate the Burden of Disease. | Nhantumbo AA, Cantarelli VV, Caireao J, Munguambe AM, Come CE, Pinto Gdo C, Zimba TF, Mandomando I, Sema CB, Dias C, Moraes MO, Gudo ES. | PLoS One | 10.1371/journal.pone.0138249 | 2015 | ||
| Pathogenicity | Aminomethyl spectinomycins as therapeutics for drug-resistant respiratory tract and sexually transmitted bacterial infections. | Bruhn DF, Waidyarachchi SL, Madhura DB, Shcherbakov D, Zheng Z, Liu J, Abdelrahman YM, Singh AP, Duscha S, Rathi C, Lee RB, Belland RJ, Meibohm B, Rosch JW, Bottger EC, Lee RE. | Sci Transl Med | 10.1126/scitranslmed.3010572 | 2015 | |
| Pathogenicity | In Vitro Antibacterial Properties of Cefiderocol, a Novel Siderophore Cephalosporin, against Gram-Negative Bacteria. | Ito A, Sato T, Ota M, Takemura M, Nishikawa T, Toba S, Kohira N, Miyagawa S, Ishibashi N, Matsumoto S, Nakamura R, Tsuji M, Yamano Y. | Antimicrob Agents Chemother | 10.1128/aac.01454-17 | 2018 | |
| Metabolism | The formyl peptide receptor like-1 and scavenger receptor MARCO are involved in glial cell activation in bacterial meningitis. | Braun BJ, Slowik A, Leib SL, Lucius R, Varoga D, Wruck CJ, Jansen S, Podschun R, Pufe T, Brandenburg LO. | J Neuroinflammation | 10.1186/1742-2094-8-11 | 2011 | |
| Pathogenicity | A wide spectrum of fastidious and ampicillin-susceptible bacteria dominate in animal-caused wounds. | Gustavsson O, Johansson AV, Monstein HJ, Nilsson LE, Bredberg A. | Eur J Clin Microbiol Infect Dis | 10.1007/s10096-016-2667-z | 2016 | |
| Enzymology | Pyrosequencing of the DNA gyrase gene in Neisseria species: effective indicator of ciprofloxacin resistance in Neisseria gonorrhoeae. | Lindback E, Unemo M, Akhras M, Gharizadeh B, Fredlund H, Pourmand N, Wretlind B. | APMIS | 10.1111/j.1600-0463.2006.apm_495.x | 2006 | |
| Phylogeny | Characterization of serogroup A and B strains of Neisseria meningitidis with serotype 4 and 21 monoclonal antibodies and by multilocus enzyme electrophoresis. | Wedege E, Caugant DA, Froholm LO, Zollinger WD. | J Clin Microbiol | 10.1128/jcm.29.7.1486-1492.1991 | 1991 | |
| Rapid diagnosis of bacterial meningitis by real-time PCR and fluorescence in situ hybridization. | Poppert S, Essig A, Stoehr B, Steingruber A, Wirths B, Juretschko S, Reischl U, Wellinghausen N. | J Clin Microbiol | 10.1128/jcm.43.7.3390-3397.2005 | 2005 | ||
| Metabolism | Mutations affecting peptidoglycan acetylation in Neisseria gonorrhoeae and Neisseria meningitidis. | Dillard JP, Hackett KT. | Infect Immun | 10.1128/iai.73.9.5697-5705.2005 | 2005 | |
| Genomic content of Neisseria species. | Tobiason DM, Seifert HS. | J Bacteriol | 10.1128/jb.01593-09 | 2010 | ||
| Enzymology | A case of Q fever prosthetic joint infection and description of an assay for detection of Coxiella burnetii. | Tande AJ, Cunningham SA, Raoult D, Sim FH, Berbari EF, Patel R. | J Clin Microbiol | 10.1128/jcm.02352-12 | 2013 | |
| Rapid PCR Detection of Mycoplasma hominis, Ureaplasma urealyticum, and Ureaplasma parvum. | Cunningham SA, Mandrekar JN, Rosenblatt JE, Patel R. | Int J Bacteriol | 10.1155/2013/168742 | 2013 | ||
| Microbial DNA typing by automated repetitive-sequence-based PCR. | Healy M, Huong J, Bittner T, Lising M, Frye S, Raza S, Schrock R, Manry J, Renwick A, Nieto R, Woods C, Versalovic J, Lupski JR. | J Clin Microbiol | 10.1128/jcm.43.1.199-207.2005 | 2005 | ||
| Metabolism | Expression and function of psoriasin (S100A7) and koebnerisin (S100A15) in the brain. | Jansen S, Podschun R, Leib SL, Grotzinger J, Oestern S, Michalek M, Pufe T, Brandenburg LO. | Infect Immun | 10.1128/iai.01265-12 | 2013 | |
| Metabolism | Activation of Exogenous Fatty Acids to Acyl-Acyl Carrier Protein Cannot Bypass FabI Inhibition in Neisseria. | Yao J, Bruhn DF, Frank MW, Lee RE, Rock CO. | J Biol Chem | 10.1074/jbc.m115.699462 | 2016 | |
| Phylogeny | Evaluation of the FilmArray Blood Culture Identification Panel: Results of a Multicenter Controlled Trial. | Salimnia H, Fairfax MR, Lephart PR, Schreckenberger P, DesJarlais SM, Johnson JK, Robinson G, Carroll KC, Greer A, Morgan M, Chan R, Loeffelholz M, Valencia-Shelton F, Jenkins S, Schuetz AN, Daly JA, Barney T, Hemmert A, Kanack KJ. | J Clin Microbiol | 10.1128/jcm.01679-15 | 2016 | |
| Enzymology | Development and validation of a rotor-gene real-time PCR assay for detection, identification, and quantification of Chlamydia trachomatis in a single reaction. | Jalal H, Stephen H, Curran MD, Burton J, Bradley M, Carne C. | J Clin Microbiol | 10.1128/jcm.44.1.206-213.2006 | 2006 | |
| Enzymology | pH gradient and distribution of streptococci, lactobacilli, prevotellae, and fusobacteria in carious dentine. | Kianoush N, Nguyen KA, Browne GV, Simonian M, Hunter N. | Clin Oral Investig | 10.1007/s00784-013-1009-0 | 2014 | |
| Rapid detection of Mycobacterium tuberculosis by recombinase polymerase amplification. | Boyle DS, McNerney R, Teng Low H, Leader BT, Perez-Osorio AC, Meyer JC, O'Sullivan DM, Brooks DG, Piepenburg O, Forrest MS. | PLoS One | 10.1371/journal.pone.0103091 | 2014 | ||
| Enzymology | Detection of Francisella tularensis within infected mouse tissues by using a hand-held PCR thermocycler. | Emanuel PA, Bell R, Dang JL, McClanahan R, David JC, Burgess RJ, Thompson J, Collins L, Hadfield T. | J Clin Microbiol | 10.1128/jcm.41.2.689-693.2003 | 2003 | |
| Analysis of Neisseria meningitidis class 3 outer membrane protein gene variable regions and type identification using genetic techniques. | Bash MC, Lesiak KB, Banks SD, Frasch CE. | Infect Immun | 10.1128/iai.63.4.1484-1490.1995 | 1995 | ||
| Development and evaluation of oligonucleotide chip based on the 16S-23S rRNA gene spacer region for detection of pathogenic microorganisms associated with sepsis. | Kim CM, Song ES, Jang HJ, Kim HJ, Lee S, Shin JH, Kim SJ, Jeong SH, Jeong J, Koh K, Choi GE, Lee EY, Chang CL. | J Clin Microbiol | 10.1128/jcm.01130-09 | 2010 | ||
| Enzymology | Enhancing the specificity of the COBAS AMPLICOR CT/NG test for Neisseria gonorrhoeae by retesting specimens with equivocal results. | Van Der Pol B, Martin DH, Schachter J, Quinn TC, Gaydos CA, Jones RB, Crotchfelt K, Moncada J, Jungkind D, Turner B, Peyton C, Kelly JF, Weiss JB, Rosenstraus M. | J Clin Microbiol | 10.1128/jcm.39.9.3092-3098.2001 | 2001 | |
| Variability in growth of Neisseria polysaccharea on colistin-containing selective media for Neisseria spp. | Anand CM, Ashton F, Shaw H, Gordon R. | J Clin Microbiol | 10.1128/jcm.29.11.2434-2437.1991 | 1991 | ||
| Phylogeny | Serotyping of Streptococcus pneumoniae based on capsular genes polymorphisms. | Raymond F, Boucher N, Allary R, Robitaille L, Lefebvre B, Tremblay C, Corbeil J, Gervaix A. | PLoS One | 10.1371/journal.pone.0076197 | 2013 | |
| Detection of bacterial growth by gas absorption. | Waters JR. | J Clin Microbiol | 10.1128/jcm.30.5.1205-1209.1992 | 1992 | ||
| Enzymology | Development of a rapid PCR assay specific for Staphylococcus saprophyticus and application to direct detection from urine samples. | Martineau F, Picard FJ, Menard C, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.38.9.3280-3284.2000 | 2000 | |
| Phylogeny | Development of a PCR assay for identification of staphylococci at genus and species levels. | Martineau F, Picard FJ, Ke D, Paradis S, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.39.7.2541-2547.2001 | 2001 | |
| Pathogenicity | Antimicrobial activities of mefloquine and a series of related compounds. | Kunin CM, Ellis WY. | Antimicrob Agents Chemother | 10.1128/aac.44.4.848-852.2000 | 2000 | |
| Enzymology | Serologic confirmation of Neisseria gonorrhoeae by monoclonal antibody-based coagglutination procedures. | Anand CM, Gubash SM, Shaw H. | J Clin Microbiol | 10.1128/jcm.26.11.2283-2286.1988 | 1988 | |
| Phylogeny | Detection and genotyping of Mycobacterium species from clinical isolates and specimens by oligonucleotide array. | Park H, Jang H, Song E, Chang CL, Lee M, Jeong S, Park J, Kang B, Kim C. | J Clin Microbiol | 10.1128/jcm.43.4.1782-1788.2005 | 2005 | |
| PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid. | Greisen K, Loeffelholz M, Purohit A, Leong D. | J Clin Microbiol | 10.1128/jcm.32.2.335-351.1994 | 1994 | ||
| Enzymology | Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species. | Picard FJ, Ke D, Boudreau DK, Boissinot M, Huletsky A, Richard D, Ouellette M, Roy PH, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.42.8.3686-3695.2004 | 2004 | |
| Enzymology | Rapid concentration and molecular enrichment approach for sensitive detection of Escherichia coli and Shigella species in potable water samples. | Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppe V, Picard FJ, Berube E, Bergeron MG. | Appl Environ Microbiol | 10.1128/aem.02337-10 | 2011 | |
| Pathogenicity | MICs of mutacin B-Ny266, nisin A, vancomycin, and oxacillin against bacterial pathogens. | Mota-Meira M, LaPointe G, Lacroix C, Lavoie MC. | Antimicrob Agents Chemother | 10.1128/aac.44.1.24-29.2000 | 2000 | |
| Enzymology | Pharyngeal colonisation by Neisseria gonorrhoeae and Neisseria meningitidis in black and white patients attending a venereal disease clinic. | Noble RC, Cooper RM, Miller BR. | Br J Vener Dis | 10.1136/sti.55.1.14 | 1979 | |
| Enzymology | New centrifugation blood culture device. | Dorn GL, Smith K. | J Clin Microbiol | 10.1128/jcm.7.1.52-54.1978 | 1978 | |
| Development of a PCR assay for rapid detection of enterococci. | Ke D, Picard FJ, Martineau F, Menard C, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.37.11.3497-3503.1999 | 1999 | ||
| Pathogenicity | New real-time PCR assay for rapid detection of methicillin-resistant Staphylococcus aureus directly from specimens containing a mixture of staphylococci. | Huletsky A, Giroux R, Rossbach V, Gagnon M, Vaillancourt M, Bernier M, Gagnon F, Truchon K, Bastien M, Picard FJ, van Belkum A, Ouellette M, Roy PH, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.42.5.1875-1884.2004 | 2004 | |
| Enzymology | Rapid identification of pathogenic Neisseria species and Branhamella catarrhalis. | Hughes B, Pezzlo MT, de la Maza LM, Peterson EM. | J Clin Microbiol | 10.1128/jcm.25.11.2223-2224.1987 | 1987 | |
| Rapid identification of mycobacteria and drug-resistant Mycobacterium tuberculosis by use of a single multiplex PCR and DNA sequencing. | Perez-Osorio AC, Boyle DS, Ingham ZK, Ostash A, Gautom RK, Colombel C, Houze Y, Leader BT. | J Clin Microbiol | 10.1128/jcm.05570-11 | 2012 | ||
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| #3758 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10036 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #37616 | ; Curators of the CIP; |
| #44624 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 3269 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68369 | Automatically annotated from API 20NE . |
| #68377 | Automatically annotated from API NH . |
| #68382 | Automatically annotated from API zym . |
| #120893 | Collection of Institut Pasteur ; Curators of the CIP; CIP 73.10 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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