Conchiformibius kuhniae | Type strain | DSM 17694, IAM 15037, JCM 21500, ATCC 29437, ICPB 3619 | BacDiveID:10457

Strain identifier

BacDive ID: 10457

Type strain:

Species: Conchiformibius kuhniae

Culture col. no.: DSM 17694, IAM 15037, JCM 21500, ATCC 29437, ICPB 3619

Strain history: IAM 15037 <-- ATCC 29437 <-- D. A. Kuhn 19 (Simonsiella sp.).

NCBI tax ID(s): 1121351 (strain), 211502 (species)

SI-ID 39530

ATCC 29437, IAM 15037, DSM 17694, NBRC 102458, JCM 21500

Special Collections

DSMZ
JCM

Other strains from Conchiformibius kuhniae

Section

Conchiformibius kuhniae DSM 17694 is an aerobe, Gram-negative bacterium that was isolated from oral cavity of cats.

Gram-negative
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Neisseriales*
	Family	*Neisseriaceae*
	Genus	*Conchiformibius*
	Species	**Conchiformibius kuhniae**
	Full Scientific Name (LPSN)	Conchiformibius kuhniae corrig. Xie and Yokota 2005

Synonym

Conchiformibium kuhniae

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.483

Multimedia content

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Information on culture and growth conditions Culture and growth conditions

Culture medium

COLUMBIA BLOOD AGAR (DSMZ Medium 429)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6978]			growth	37 °C
[Ref.: #67770]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

Oxygen tolerance

aerobe

[Ref.: #69480]	Ability of spore formation	no Confidence in %93.284
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

Observation

quinones: Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6978]	Sample type/isolated from	oral cavity of cats

[Ref.: #67770]	Sample type/isolated from	Cat
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Felidae (Cat)
#Host Body-Site	#Oral cavity and airways	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

Biosafety level

1

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6978]	Simonsiella sp. ATCC 29437 16S ribosomal RNA gene, partial sequence	AF328150	1464	GenBank ENA	211502 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Conchiformibius kuhniae DSM 17694	GCA_000428785	scaffold	GenBank ENA	1121351 tax ID
[Ref.: #66792]	Conchiformibius kuhniae DSM 17694	1121351.3	wgs	PATRIC	1121351 tax ID	*
[Ref.: #66792]	Conchiformibius kuhniae DSM 17694	2524023156	draft	JGI IMG/M	1121351 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Conchiformibius kuhniae DSM 17694 DSM 17694 NCBI: GCA_000428785.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Conchiformibius kuhniae DSM 17694 PATRIC: 1121351.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	99.483	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.044	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	93.284	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	66.478	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.479	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	84.387	no

Availability in culture collections External links

Culture collection no.

DSM 17694, IAM 15037, JCM 21500, ATCC 29437, ICPB 3619

SI-ID 39530

*

References

#6978

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17694

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#79734

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39530.1 )

* These data were automatically processed and therefore are not curated

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