Eikenella corrodens 333/54-55 is a mesophilic, Gram-negative, rod-shaped prokaryote that was isolated from sputum.
Gram-negative rod-shaped mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Neisseriales |
| Family Neisseriaceae |
| Genus Eikenella |
| Species Eikenella corrodens |
| Full scientific name Eikenella corrodens (Eiken 1958) Jackson and Goodman 1972 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 33476 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 118756 | CIP Medium 6 | Medium recipe at CIP | |||
| 3257 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | obligate aerobe | 98.8 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125438 | 92.423 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68377 | 15824 ChEBI | D-fructose | - | builds acid from | from API NH |
| 68377 | 17634 ChEBI | D-glucose | - | builds acid from | from API NH |
| 118756 | 4853 ChEBI | esculin | - | hydrolysis | |
| 118756 | 17234 ChEBI | glucose | - | degradation | |
| 118756 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 118756 | 15792 ChEBI | malonate | - | assimilation | |
| 68377 | 17306 ChEBI | maltose | - | builds acid from | from API NH |
| 118756 | 17632 ChEBI | nitrate | - | builds gas from | |
| 118756 | 17632 ChEBI | nitrate | + | reduction | |
| 118756 | 17632 ChEBI | nitrate | + | respiration | |
| 118756 | 16301 ChEBI | nitrite | - | builds gas from | |
| 118756 | 16301 ChEBI | nitrite | - | reduction | |
| 68377 | 27897 ChEBI | tryptophan | - | energy source | from API NH |
| 68377 | 16199 ChEBI | urea | - | hydrolysis | from API NH |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 118756 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 118756 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68377 | alkaline phosphatase | - | 3.1.3.1 | from API NH |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 118756 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68377 | beta-lactamase | - | 3.5.2.6 | from API NH |
| 118756 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 118756 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 118756 | gelatinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68377 | lipase | - | from API NH | |
| 68382 | lipase (C 14) | - | from API zym | |
| 118756 | lysine decarboxylase | + | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 118756 | ornithine decarboxylase | + | 4.1.1.17 | |
| 118756 | oxidase | + | ||
| 118756 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 118756 | tryptophan deaminase | - | ||
| 68377 | tryptophan deaminase | - | 4.1.99.1 | from API NH |
| 118756 | urease | - | 3.5.1.5 | |
| 68377 | urease | - | 3.5.1.5 | from API NH |
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||
| @ref | 44497 | |||||||||||||||||||||||||||||||||
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| Metadata FA analysis | |||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||||||||
| @ref | 44497 | ||||||||||||||||||||||||||||||
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Global distribution of 16S sequence AB525415 (>99% sequence identity) for Eikenella corrodens from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Eikenella corrodens strain FDAARGOS_1474 | complete | 539 | 99.2 | ||||
| 66792 | Eikenella corrodens strain FDAARGOS_1474 | complete | 539 | 99.2 | ||||
| 66792 | Eikenella corrodens strain FDAARGOS_1474 | complete | 539 | 99.2 | ||||
| 124043 | ASM1993084v1 assembly for Eikenella corrodens FDAARGOS_1474 | complete | 539 | 97.94 | ||||
| 66792 | 50618_F01 assembly for Eikenella corrodens NCTC10596 | complete | 539 | 95.68 | ||||
| 67770 | ASM15861v1 assembly for Eikenella corrodens ATCC 23834 | scaffold | 546274 | 62.78 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | E.Corrodens (strain ATCC 23834) 16S ribosomal RNA, complete cds | M22512 | 1481 | 539 | ||
| 20218 | Eikenella corrodens strain BCRC 14415 16S-23S ribosomal RNA intergenic spacer, complete sequence | EU014522 | 734 | 539 | ||
| 20218 | Eikenella corrodens 16S rRNA gene, partial | AJ247212 | 458 | 539 | ||
| 20218 | E.corrodens (strain FDC 1073) 16S ribosomal RNA, complete cds | M22515 | 1476 | 539 | ||
| 20218 | Eikenella corrodens gene for 16S ribosomal RNA, paertial sequence, strain: JCM 12952 | AB525415 | 1503 | 539 | ||
| 20218 | Eikenella corrodens strain NCTC 10596 16S ribosomal RNA gene, partial sequence | EF012271 | 623 | 539 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 83.90 | no |
| 125439 | motility | BacteriaNetⓘ | no | 93.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 95.70 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.06 | no |
| 125438 | aerobic | aerobicⓘ | no | 53.02 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 92.42 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.28 | no |
| 125438 | flagellated | motile2+ⓘ | no | 83.98 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Evaluation of microbiota associated with Herpesviruses in active sites of generalized aggressive periodontitis. | Passariello C, Gigola P, Testarelli L, Puttini M, Schippa S, Petti S. | Ann Stomatol (Roma) | 10.11138/ads/2017.8.2.071 | 2017 | ||
| Comparison of Mast Burkholderia Cepacia, Ashdown + Gentamicin, and Burkholderia Pseudomallei Selective Agar for the Selective Growth of Burkholderia Spp. | Edler C, Derschum H, Kohler M, Neubauer H, Frickmann H, Hagen RM. | Eur J Microbiol Immunol (Bp) | 10.1556/1886.2016.00037 | 2017 | ||
| Strategy for sensitive and specific detection of Yersinia pestis in skeletons of the black death pandemic. | Seifert L, Harbeck M, Thomas A, Hoke N, Zoller L, Wiechmann I, Grupe G, Scholz HC, Riehm JM. | PLoS One | 10.1371/journal.pone.0075742 | 2013 | ||
| Two different and robustly modeled DNA binding modes of Competence Protein ComP - systematic modeling with AlphaFold 3, RoseTTAFold2NA, Chai-1 and re-docking in HADDOCK. | Helsem SA, Alfsnes K, Frye SA, Hesselberg Lovestad A, Ambur OH. | PLoS One | 10.1371/journal.pone.0315160 | 2025 | ||
| Lactobacillus acidophilus impairs the establishment of pathogens in a subgingival multispecies biofilm. | Bueno MR, Dudu-Silva G, Macedo TT, Gomes APAP, Rodrigues Oliveira Braga A, Aguiar Silva LD, Bueno-Silva B. | Front Dent Med | 10.3389/fdmed.2023.1212773 | 2023 | ||
| Antimicrobial Activity of Methylene Blue Associated with Photodynamic Therapy: In Vitro Study in Multi-Species Oral Biofilm. | Bueno-Silva B, Parma-Garcia J, Frigo L, Suarez LJ, Macedo TT, Uyeda FH, Melo MARDC, Sacco R, Mourao CF, Feres M, Shibli JA, Figueiredo LC. | Pathogens | 10.3390/pathogens13040342 | 2024 | ||
| The In-Vitro Activity of a Cold Atmospheric Plasma Device Utilizing Ambient Air against Bacteria and Biofilms Associated with Periodontal or Peri-Implant Diseases. | Jungbauer G, Favaro L, Muller S, Sculean A, Eick S. | Antibiotics (Basel) | 10.3390/antibiotics11060752 | 2022 | ||
| Pathogenicity | Antibacterial Activity of a Bioactive Tooth-Coating Material Containing Surface Pre-Reacted Glass in a Complex Multispecies Subgingival Biofilm. | Tanaka CJ, Rodrigues JA, Pingueiro JMS, Macedo TT, Feres M, Shibli JA, Bueno-Silva B. | Pharmaceutics | 10.3390/pharmaceutics15061727 | 2023 | |
| Evaluation of the Microbial Profile on the Polydioxanone Membrane and the Collagen Membrane Exposed to Multi-Species Subgingival Biofilm: An In Vitro Study. | Cintra Moreira MV, Figueiredo LC, da Cunha Melo MAR, Uyeda FH, da Silva LDA, Macedo TT, Sacco R, Mourao CF, Shibli JA, Bueno-Silva B. | Membranes (Basel) | 10.3390/membranes13120907 | 2023 | ||
| Anti-biofilm Activity of Oral Health-care Products Containing Chlorhexidine Digluconate and Citrox. | Jeyakumar J, Sculean A, Eick S. | Oral Health Prev Dent | 10.3290/j.ohpd.a45437 | 2020 | ||
| An In Vitro study to Compare Dental Laser with other Treatment Modalities on Biofilm Ablation from Implant and Tooth Surfaces. | Vaddamanu SK, Vyas R, Kavita K, Sushma R, Rani RP, Dixit A, Badiyani BK. | J Pharm Bioallied Sci | 10.4103/jpbs.jpbs_98_22 | 2022 | ||
| Evaluation of Predation Capability of Periodontopathogens Bacteria by Bdellovibrio Bacteriovorus HD100. An in Vitro Study. | Patini R, Cattani P, Marchetti S, Isola G, Quaranta G, Gallenzi P. | Materials (Basel) | 10.3390/ma12122008 | 2019 | ||
| In vitro activity of hyaluronic acid and human serum on periodontal biofilm and periodontal ligament fibroblasts. | Zhu X, von Werdt L, Zappala G, Sculean A, Eick S, Stahli A. | Clin Oral Investig | 10.1007/s00784-023-05121-z | 2023 | ||
| Pathogenicity | In-vitro effects of different hyaluronic acids on periodontal biofilm-immune cell interaction. | Zhu X, Sculean A, Eick S. | Front Cell Infect Microbiol | 10.3389/fcimb.2024.1414861 | 2024 | |
| In Vitro Adherence of Oral Bacteria to Different Types of Tongue Piercings. | Borges LP, Ferreira-Filho JC, Martins JM, Alves CV, Santiago BM, Valenca AM. | ScientificWorldJournal | 10.1155/2016/7349371 | 2016 | ||
| Hidden noise in immunologic parameters might explain rapid progression in early-onset periodontitis. | Papantonopoulos G, Delatola C, Takahashi K, Laine ML, Loos BG. | PLoS One | 10.1371/journal.pone.0224615 | 2019 | ||
| Propolis, Aloe Vera, Green Tea, Cranberry, Calendula, Myrrha and Salvia Properties against Periodontal Microorganisms. | Figueiredo LC, Freitas Figueiredo N, da Cruz DF, Baccelli GT, Sarachini GE, Bueno MR, Feres M, Bueno-Silva B. | Microorganisms | 10.3390/microorganisms10112172 | 2022 | ||
| Activity of five antimicrobial peptides against periodontal as well as non-periodontal pathogenic strains. | Enigk K, Jentsch H, Rodloff AC, Eschrich K, Stingu CS. | J Oral Microbiol | 10.1080/20002297.2020.1829405 | 2020 | ||
| In Vitro Activity of Propolis on Oral Microorganisms and Biofilms. | Stahli A, Schroter H, Bullitta S, Serralutzu F, Dore A, Nietzsche S, Milia E, Sculean A, Eick S. | Antibiotics (Basel) | 10.3390/antibiotics10091045 | 2021 | ||
| Comparative in silico analysis of ftsZ gene from different bacteria reveals the preference for core set of codons in coding sequence structuring and secondary structural elements determination. | Pal A, Saha BK, Saha J. | PLoS One | 10.1371/journal.pone.0219231 | 2019 | ||
| Laboratory Diagnosis of 37 Cases of Bartonella Endocarditis Based on Enzyme Immunoassay and Real-Time PCR. | Shapira L, Rasis M, Binsky Ehrenreich I, Maor Y, Katchman EA, Treves A, Velan A, Halutz O, Graidy-Varon M, Leibovitch C, Maisler N, Ephros M, Giladi M. | J Clin Microbiol | 10.1128/jcm.02217-20 | 2021 | ||
| Genetics | Evaluation of Extraction Methods for Clinical Metagenomic Assay. | Farraj SA, El-Kafrawy SA, Kumosani TA, Yousef JM, Azhar EI. | Microorganisms | 10.3390/microorganisms8081128 | 2020 | |
| Brazilian Red Propolis Is as Effective as Amoxicillin in Controlling Red-Complex of Multispecies Subgingival Mature Biofilm In Vitro. | de Figueiredo KA, da Silva HDP, Miranda SLF, Goncalves FJDS, de Sousa AP, de Figueiredo LC, Feres M, Bueno-Silva B. | Antibiotics (Basel) | 10.3390/antibiotics9080432 | 2020 | ||
| Electrospun PLA Fibers Containing Metronidazole for Periodontal Disease. | Budai-Szucs M, Leber A, Cui L, Jozo M, Valyi P, Burian K, Kirschweng B, Csanyi E, Pukanszky B. | Drug Des Devel Ther | 10.2147/dddt.s231748 | 2020 | ||
| Metabolic activity of hydro-carbon-oxo-borate on a multispecies subgingival periodontal biofilm: a short communication. | Shibli JA, Rocha TF, Coelho F, de Oliveira Capote TS, Saska S, Melo MA, Pingueiro JMS, de Faveri M, Bueno-Silva B. | Clin Oral Investig | 10.1007/s00784-021-03900-0 | 2021 | ||
| Phylogeny | DNA Phosphorothioate Modifications Are Widely Distributed in the Human Microbiome. | Sun Y, Kong L, Wu G, Cao B, Pang X, Deng Z, Dedon PC, Zhang C, You D. | Biomolecules | 10.3390/biom10081175 | 2020 | |
| Transcriptome | Gene expression of bacterial collagenolytic proteases in root caries. | Dame-Teixeira N, Parolo CCF, Maltz M, Rup AG, Devine DA, Do T. | J Oral Microbiol | 10.1080/20002297.2018.1424475 | 2018 | |
| Purification and Anti-pathogenic Properties of Immunoglobulin Concentrates from Porcine Blood. | Jung TH, Choi JH, Koh KC, Jeon WM, Han KS. | Korean J Food Sci Anim Resour | 10.5851/kosfa.2017.37.5.743 | 2017 | ||
| In Vitro-Activity of Er:YAG Laser in Comparison with other Treatment Modalities on Biofilm Ablation from Implant and Tooth Surfaces. | Eick S, Meier I, Spoerle F, Bender P, Aoki A, Izumi Y, Salvi GE, Sculean A. | PLoS One | 10.1371/journal.pone.0171086 | 2017 | ||
| Genetics | Characterization of saliva microbiota's functional feature based on metagenomic sequencing. | Yang F, Ning K, Zeng X, Zhou Q, Su X, Yuan X. | Springerplus | 10.1186/s40064-016-3728-6 | 2016 | |
| Enzymology | Bacteriological analysis of necrotic pulp and fistulae in primary teeth. | Fabris AS, Nakano V, Avila-Campos MJ. | J Appl Oral Sci | 10.1590/1678-775720130358 | 2014 | |
| Pathogenicity | Periodontitis: etiology, conventional treatments, and emerging bacteriophage and predatory bacteria therapies. | Lasica A, Golec P, Laskus A, Zalewska M, Gedaj M, Popowska M. | Front Microbiol | 10.3389/fmicb.2024.1469414 | 2024 | |
| N-acetyl-D-galactosamine specific lectin of Eikenella corrodens induces intercellular adhesion molecule-1 (ICAM-1) production by human oral epithelial cells. | Yamada M, Nakae H, Yumoto H, Shinohara C, Ebisu S, Matsuo T. | J Med Microbiol | 10.1099/0022-1317-51-12-1080 | 2002 | ||
| Associations between Periodontal Microbiota and Death Rates. | Chiu CJ, Chang ML, Taylor A. | Sci Rep | 10.1038/srep35428 | 2016 | ||
| Phylogeny | Dialects of the DNA uptake sequence in Neisseriaceae. | Frye SA, Nilsen M, Tonjum T, Ambur OH. | PLoS Genet | 10.1371/journal.pgen.1003458 | 2013 | |
| Estimation of bacterial hydrogen sulfide production in vitro. | Basic A, Blomqvist S, Carlen A, Dahlen G. | J Oral Microbiol | 10.3402/jom.v7.28166 | 2015 | ||
| Pathogenicity | Effect of smokeless tobacco products on human oral bacteria growth and viability. | Liu M, Jin J, Pan H, Feng J, Cerniglia CE, Yang M, Chen H. | Anaerobe | 10.1016/j.anaerobe.2016.10.006 | 2016 | |
| Periodontal Bacteria and Prediabetes Prevalence in ORIGINS: The Oral Infections, Glucose Intolerance, and Insulin Resistance Study. | Demmer RT, Jacobs DR, Singh R, Zuk A, Rosenbaum M, Papapanou PN, Desvarieux M. | J Dent Res | 10.1177/0022034515590369 | 2015 | ||
| Pathogenicity | In vitro-activity of oily calcium hydroxide suspension on microorganisms as well as on human alveolar osteoblasts and periodontal ligament fibroblasts. | Eick S, Strugar T, Miron RJ, Sculean A. | BMC Oral Health | 10.1186/1472-6831-14-9 | 2014 | |
| Phylogeny | Uncultivated bacteria as etiologic agents of intra-amniotic inflammation leading to preterm birth. | Han YW, Shen T, Chung P, Buhimschi IA, Buhimschi CS. | J Clin Microbiol | 10.1128/jcm.01206-08 | 2009 | |
| Common Cell Shape Evolution of Two Nasopharyngeal Pathogens. | Veyrier FJ, Biais N, Morales P, Belkacem N, Guilhen C, Ranjeva S, Sismeiro O, Pehau-Arnaudet G, Rocha EP, Werts C, Taha MK, Boneca IG. | PLoS Genet | 10.1371/journal.pgen.1005338 | 2015 | ||
| Enzymology | Purification and characterization of Eikenella corrodens type IV pilin. | Hood BL, Hirschberg R. | Infect Immun | 10.1128/iai.63.9.3693-3696.1995 | 1995 | |
| Pathogenicity | Photoactive porphyrin derivative with broad-spectrum activity against oral pathogens In vitro. | Rovaldi CR, Pievsky A, Sole NA, Friden PM, Rothstein DM, Spacciapoli P. | Antimicrob Agents Chemother | 10.1128/aac.44.12.3364-3367.2000 | 2000 | |
| Interactions between periodontal bacteria and human oral epithelial cells: Fusobacterium nucleatum adheres to and invades epithelial cells. | Han YW, Shi W, Huang GT, Kinder Haake S, Park NH, Kuramitsu H, Genco RJ. | Infect Immun | 10.1128/iai.68.6.3140-3146.2000 | 2000 | ||
| Metabolism | Eikenella corrodens phase variation involves a posttranslational event in pilus formation. | Villar MT, Helber JT, Hood B, Schaefer MR, Hirschberg RL. | J Bacteriol | 10.1128/jb.181.14.4154-4160.1999 | 1999 | |
| Humoral IgG antibodies to oral microbiota in a population at risk for root-surface caries. | Kent R, Smith DJ, Joshipura K, Soparkar P, Taubman MA. | J Dent Res | 10.1177/00220345920710070801 | 1992 | ||
| Clonal diversity of oral Eikenella corrodens within individual subjects by arbitrarily primed PCR. | Chen C, Ashimoto A. | J Clin Microbiol | 10.1128/jcm.34.7.1837-1839.1996 | 1996 | ||
| Enzymology | Periodontal microbiota and phospholipases: the Oral Infections and Vascular Disease Epidemiology Study (INVEST). | Boillot A, Demmer RT, Mallat Z, Sacco RL, Jacobs DR, Benessiano J, Tedgui A, Rundek T, Papapanou PN, Desvarieux M. | Atherosclerosis | 10.1016/j.atherosclerosis.2015.07.039 | 2015 | |
| Metabolism | Role of the Eikenella corrodens pilA locus in pilus function and phase variation. | Villar MT, Hirschberg RL, Schaefer MR. | J Bacteriol | 10.1128/jb.183.1.55-62.2001 | 2001 | |
| Pathogenicity | Comparative in vitro activities of DU-6859a, levofloxacin, ofloxacin, sparfloxacin, and ciprofloxacin against 387 aerobic and anaerobic bite wound isolates. | Goldstein EJ, Citron DM, Hunt Gerardo S, Hudspeth M, Merriam CV. | Antimicrob Agents Chemother | 10.1128/aac.41.5.1193 | 1997 | |
| Periodontal treatment effects on endothelial function and cardiovascular disease biomarkers in subjects with chronic periodontitis: protocol for a randomized clinical trial. | Ramirez JH, Arce RM, Contreras A. | Trials | 10.1186/1745-6215-12-46 | 2011 | ||
| Pathogenicity | Changes in clinical and microbiological periodontal profiles relate to progression of carotid intima-media thickness: the Oral Infections and Vascular Disease Epidemiology study. | Desvarieux M, Demmer RT, Jacobs DR, Papapanou PN, Sacco RL, Rundek T. | J Am Heart Assoc | 10.1161/jaha.113.000254 | 2013 | |
| Microbial Biofilm Decontamination on Dental Implant Surfaces: A Mini Review. | Dhaliwal JS, Abd Rahman NA, Ming LC, Dhaliwal SKS, Knights J, Albuquerque Junior RF. | Front Cell Infect Microbiol | 10.3389/fcimb.2021.736186 | 2021 | ||
| Effects of azithromycin, metronidazole, amoxicillin, and metronidazole plus amoxicillin on an in vitro polymicrobial subgingival biofilm model. | Soares GM, Teles F, Starr JR, Feres M, Patel M, Martin L, Teles R. | Antimicrob Agents Chemother | 10.1128/aac.04974-14 | 2015 | ||
| Metabolism | Subgingival bacterial colonization profiles correlate with gingival tissue gene expression. | Papapanou PN, Behle JH, Kebschull M, Celenti R, Wolf DL, Handfield M, Pavlidis P, Demmer RT. | BMC Microbiol | 10.1186/1471-2180-9-221 | 2009 | |
| Artificial neural networks for the diagnosis of aggressive periodontitis trained by immunologic parameters. | Papantonopoulos G, Takahashi K, Bountis T, Loos BG. | PLoS One | 10.1371/journal.pone.0089757 | 2014 | ||
| Pathogenicity | Comparative in vitro activities of azithromycin, Bay y 3118, levofloxacin, sparfloxacin, and 11 other oral antimicrobial agents against 194 aerobic and anaerobic bite wound isolates. | Goldstein EJ, Nesbit CA, Citron DM. | Antimicrob Agents Chemother | 10.1128/aac.39.5.1097 | 1995 | |
| A Biofilm Pocket Model to Evaluate Different Non-Surgical Periodontal Treatment Modalities in Terms of Biofilm Removal and Reformation, Surface Alterations and Attachment of Periodontal Ligament Fibroblasts. | Hagi TT, Klemensberger S, Bereiter R, Nietzsche S, Cosgarea R, Flury S, Lussi A, Sculean A, Eick S. | PLoS One | 10.1371/journal.pone.0131056 | 2015 | ||
| Cellular fatty acid composition of Kingella species, Cardiobacterium hominis, and Eikenella corrodens. | Wallace PL, Hollis DG, Weaver RE, Moss CW. | J Clin Microbiol | 10.1128/jcm.26.8.1592-1594.1988 | 1988 | ||
| Phylogeny | Identification of seven Treponema species in health- and disease-associated dental plaque by nested PCR. | Willis SG, Smith KS, Dunn VL, Gapter LA, Riviere KH, Riviere GR. | J Clin Microbiol | 10.1128/jcm.37.3.867-869.1999 | 1999 | |
| Restriction endonuclease analysis of Eikenella corrodens. | Chen CK, Sunday GJ, Zambon JJ, Wilson ME. | J Clin Microbiol | 10.1128/jcm.28.6.1265-1270.1990 | 1990 | ||
| An Eikenella corrodens toxin detected by plaque toxin-neutralizing monoclonal antibodies. | Levine M, Miller FC. | Infect Immun | 10.1128/iai.64.5.1672-1678.1996 | 1996 | ||
| Characterization of Wolinella spp., Campylobacter concisus, Bacteroides gracilis, and Eikenella corrodens by polyacrylamide gel electrophoresis. | Tanner AC. | J Clin Microbiol | 10.1128/jcm.24.4.562-565.1986 | 1986 | ||
| Pathogenicity | Comparative activities of cefuroxime, amoxicillin-clavulanic acid, ciprofloxacin, enoxacin, and ofloxacin against aerobic and anaerobic bacteria isolated from bite wounds. | Goldstein EJ, Citron DM. | Antimicrob Agents Chemother | 10.1128/aac.32.8.1143 | 1988 | |
| Pathogenicity | In vitro sensitivity of oral, gram-negative, facultative bacteria to the bactericidal activity of human neutrophil defensins. | Miyasaki KT, Bodeau AL, Ganz T, Selsted ME, Lehrer RI. | Infect Immun | 10.1128/iai.58.12.3934-3940.1990 | 1990 | |
| The vaginal microflora in relation to gingivitis. | Persson R, Hitti J, Verhelst R, Vaneechoutte M, Persson R, Hirschi R, Weibel M, Rothen M, Temmerman M, Paul K, Eschenbach D. | BMC Infect Dis | 10.1186/1471-2334-9-6 | 2009 | ||
| Pathogenicity | Bactericidal activities of synthetic human leukocyte cathepsin G-derived antibiotic peptides and congeners against Actinobacillus actinomycetemcomitans and Capnocytophaga sputigena. | Miyasaki KT, Bodeau AL, Pohl J, Shafer WM. | Antimicrob Agents Chemother | 10.1128/aac.37.12.2710 | 1993 | |
| A type-specific antigen of Eikenella corrodens is the major outer membrane protein. | Maliszewski CR, Shuster CW, Badger SJ. | Infect Immun | 10.1128/iai.42.1.208-213.1983 | 1983 | ||
| Enzymology | Isolation and characterization of the outer membrane and lipopolysaccharide from Eikenella corrodens. | Progulske A, Holt SC. | Infect Immun | 10.1128/iai.43.1.166-177.1984 | 1984 | |
| Plasma antibodies to oral bacteria and risk of pancreatic cancer in a large European prospective cohort study. | Michaud DS, Izard J, Wilhelm-Benartzi CS, You DH, Grote VA, Tjonneland A, Dahm CC, Overvad K, Jenab M, Fedirko V, Boutron-Ruault MC, Clavel-Chapelon F, Racine A, Kaaks R, Boeing H, Foerster J, Trichopoulou A, Lagiou P, Trichopoulos D, Sacerdote C, Sieri S, Palli D, Tumino R, Panico S, Siersema PD, Peeters PH, Lund E, Barricarte A, Huerta JM, Molina-Montes E, Dorronsoro M, Quiros JR, Duell EJ, Ye W, Sund M, Lindkvist B, Johansen D, Khaw KT, Wareham N, Travis RC, Vineis P, Bueno-de-Mesquita HB, Riboli E. | Gut | 10.1136/gutjnl-2012-303006 | 2013 | ||
| Pathogenicity | Activities of HMR 3004 (RU 64004) and HMR 3647 (RU 66647) compared to those of erythromycin, azithromycin, clarithromycin, roxithromycin, and eight other antimicrobial agents against unusual aerobic and anaerobic human and animal bite pathogens isolated from skin and soft tissue infections in humans. | Goldstein EJ, Citron DM, Hunt Gerardo S, Hudspeth M, Merriam CV. | Antimicrob Agents Chemother | 10.1128/aac.42.5.1127 | 1998 | |
| Pathogenicity | Comparative susceptibilities of 173 aerobic and anaerobic bite wound isolates to sparfloxacin, temafloxacin, clarithromycin, and older agents. | Goldstein EJ, Citron DM. | Antimicrob Agents Chemother | 10.1128/aac.37.5.1150 | 1993 | |
| Enzymology | Sialidase (neuraminidase) activity among gram-negative anaerobic and capnophilic bacteria. | Moncla BJ, Braham P, Hillier SL. | J Clin Microbiol | 10.1128/jcm.28.3.422-425.1990 | 1990 | |
| Enzymology | Use of synthetic oligonucleotide DNA probes for identification and direct detection of Bacteroides forsythus in plaque samples. | Moncla BJ, Motley ST, Braham P, Ewing L, Adams TH, Vermeulen NM. | J Clin Microbiol | 10.1128/jcm.29.10.2158-2162.1991 | 1991 | |
| Humoral antibody response against Bacteroides gingivalis-specific antigen recognized by monoclonal antibody in adult periodontal patients. | Miyoshi T, Hanazawa S, Hirose K, Saitoh K, Amano S, Ohmori Y, Kitano S. | Infect Immun | 10.1128/iai.53.2.366-371.1986 | 1986 | ||
| Enzymology | Human neutrophil azurocidin synergizes with leukocyte elastase and cathepsin G in the killing of Capnocytophaga sputigena. | Miyasaki KT, Bodeau AL. | Infect Immun | 10.1128/iai.60.11.4973-4975.1992 | 1992 | |
| Enzymology | Application of monoclonal antibodies to the detection of black-pigmented Bacteroides spp. in subgingival plaques by immunoslot blot assay. | Hanazawa S, Tanaka S, Kin M, Amano S, Nakada K, Masuda T, Kitano S. | J Clin Microbiol | 10.1128/jcm.28.10.2248-2252.1990 | 1990 | |
| Metabolism | Natural competence and the evolution of DNA uptake specificity. | Mell JC, Redfield RJ. | J Bacteriol | 10.1128/jb.01293-13 | 2014 | |
| Enzymology | Extraction, purification, and characterization of major outer membrane proteins from Wolinella recta ATCC 33238. | Kennell WL, Holt SC. | Infect Immun | 10.1128/iai.59.10.3740-3749.1991 | 1991 | |
| PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid. | Greisen K, Loeffelholz M, Purohit A, Leong D. | J Clin Microbiol | 10.1128/jcm.32.2.335-351.1994 | 1994 | ||
| Metabolism | Ability of bacteria associated with chronic inflammatory disease to stimulate E-selectin expression and promote neutrophil adhesion. | Darveau RP, Cunningham MD, Bailey T, Seachord C, Ratcliffe K, Bainbridge B, Dietsch M, Page RC, Aruffo A. | Infect Immun | 10.1128/iai.63.4.1311-1317.1995 | 1995 | |
| Pathogenicity | In vitro activity of Bay 12-8039, a new 8-methoxyquinolone, compared to the activities of 11 other oral antimicrobial agents against 390 aerobic and anaerobic bacteria isolated from human and animal bite wound skin and soft tissue infections in humans. | Goldstein EJ, Citron DM, Hudspeth M, Hunt Gerardo S, Merriam CV. | Antimicrob Agents Chemother | 10.1128/aac.41.7.1552 | 1997 | |
| Phylogeny | Bioinformatic characterization of the 4-Toluene Sulfonate Uptake Permease (TSUP) family of transmembrane proteins. | Shlykov MA, Zheng WH, Chen JS, Saier MH. | Biochim Biophys Acta | 10.1016/j.bbamem.2011.12.005 | 2012 | |
| Metabolism | Single-residue changes in the C-terminal disulfide-bonded loop of the Pseudomonas aeruginosa type IV pilin influence pilus assembly and twitching motility. | Harvey H, Habash M, Aidoo F, Burrows LL. | J Bacteriol | 10.1128/jb.00943-09 | 2009 | |
| Periodontal microbiota and carotid intima-media thickness: the Oral Infections and Vascular Disease Epidemiology Study (INVEST). | Desvarieux M, Demmer RT, Rundek T, Boden-Albala B, Jacobs DR, Sacco RL, Papapanou PN. | Circulation | 10.1161/01.cir.0000154582.37101.15 | 2005 | ||
| Enzymology | Comparison of randomly cloned and whole genomic DNA probes for the detection of Porphyromonas gingivalis and Bacteroides forsythus. | Wong M, DiRienzo JM, Lai CH, Listgarten MA. | J Periodontal Res | 10.1111/j.1600-0765.1996.tb00460.x | 1996 | |
| Compilation of small ribosomal subunit RNA structures. | Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R. | Nucleic Acids Res | 10.1093/nar/21.13.3025 | 1993 | ||
| Enzymology | Detection of Mycobacterium tuberculosis by PCR amplification with pan-Mycobacterium primers and hybridization to an M. tuberculosis-specific probe. | Tevere VJ, Hewitt PL, Dare A, Hocknell P, Keen A, Spadoro JP, Young KK. | J Clin Microbiol | 10.1128/jcm.34.4.918-923.1996 | 1996 | |
| Enzymology | High levels of Gardnerella vaginalis detected with an oligonucleotide probe combined with elevated pH as a diagnostic indicator of bacterial vaginosis. | Sheiness D, Dix K, Watanabe S, Hillier SL. | J Clin Microbiol | 10.1128/jcm.30.3.642-648.1992 | 1992 | |
| Oral Probiotics, Streptococcus salivarius K12 and M18, Suppress the Release of Volatile Sulfur Compounds and a Virulent Protease from Oral Bacteria: An In-Vitro Study. | Park JA, Lee GR, Lee JY, Jin BH. | Oral Health Prev Dent | 10.3290/j.ohpd.b4328987 | 2023 | ||
| Prevalence and abundance of 9 periodontal pathogens in the saliva of periodontally healthy adults and patients undergoing supportive periodontal therapy. | Jung WR, Joo JY, Lee JY, Kim HJ. | J Periodontal Implant Sci | 10.5051/jpis.2006640332 | 2021 | ||
| Antiperiodontitis Effects of Siegesbeckia glabrescens In Vitro. | Bellere AD, Yu D, Oh S, Kim M, Jung J, Fang M, Zheng S, Yi TH. | Antioxidants (Basel) | 10.3390/antiox12020471 | 2023 | ||
| Real-time PCR quantification of 9 periodontal pathogens in saliva samples from periodontally healthy Korean young adults. | Choi H, Kim E, Kang J, Kim HJ, Lee JY, Choi J, Joo JY. | J Periodontal Implant Sci | 10.5051/jpis.2018.48.4.261 | 2018 | ||
| Enzymology | Grading system for periodontitis by analyzing levels of periodontal pathogens in saliva. | Kim EH, Joo JY, Lee YJ, Koh JK, Choi JH, Shin Y, Cho J, Park E, Kang J, Lee K, Bhak J, Kim BC, Lee JY. | PLoS One | 10.1371/journal.pone.0200900 | 2018 | |
| Pathogenicity | Cytokine release and NLRP3 inflammasome activation induced by low-abundance oral bacterial biofilms. | Karched M, Guleri Bhardwaj R, Abu Al-Melh M, Qudeimat MA. | J Oral Microbiol | 10.1080/20002297.2025.2552167 | 2025 | |
| Filifactor alocis--involvement in periodontal biofilms. | Schlafer S, Riep B, Griffen AL, Petrich A, Hubner J, Berning M, Friedmann A, Gobel UB, Moter A. | BMC Microbiol | 10.1186/1471-2180-10-66 | 2010 | ||
| Phylogeny | Are putative periodontal pathogens reliable diagnostic markers? | Riep B, Edesi-Neuss L, Claessen F, Skarabis H, Ehmke B, Flemmig TF, Bernimoulin JP, Gobel UB, Moter A. | J Clin Microbiol | 10.1128/jcm.01387-08 | 2009 | |
| Proteome | In Silico Subtractive Proteome Analysis to Design Multi-Epitope-Based Subunit Vaccine against Eikenella corrodens. | AlMalki F. | J Microbiol Biotechnol | 10.4014/jmb.2410.10015 | 2024 | |
| In vitro culture of previously uncultured oral bacterial phylotypes. | Thompson H, Rybalka A, Moazzez R, Dewhirst FE, Wade WG. | Appl Environ Microbiol | 10.1128/aem.02156-15 | 2015 | ||
| Periodontal pathogens and tetracycline resistance genes in subgingival biofilm of periodontally healthy and diseased Dominican adults. | Collins JR, Arredondo A, Roa A, Valdez Y, Leon R, Blanc V. | Clin Oral Investig | 10.1007/s00784-015-1516-2 | 2016 | ||
| Metabolism | The potent bone-resorbing mediator of Actinobacillus actinomycetemcomitans is homologous to the molecular chaperone GroEL. | Kirby AC, Meghji S, Nair SP, White P, Reddi K, Nishihara T, Nakashima K, Willis AC, Sim R, Wilson M. | J Clin Invest | 10.1172/jci118150 | 1995 | |
| Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. | Collins MD, Jones D. | Microbiol Rev | 10.1128/mr.45.2.316-354.1981 | 1981 | ||
| Phylogeny | Diagnostics of neisseriaceae and moraxellaceae by ribosomal DNA sequencing: ribosomal differentiation of medical microorganisms. | Harmsen D, Singer C, Rothganger J, Tonjum T, de Hoog GS, Shah H, Albert J, Frosch M. | J Clin Microbiol | 10.1128/jcm.39.3.936-942.2001 | 2001 | |
| Enzymology | New real-time PCR-based method for Kingella kingae DNA detection: application to samples collected from 89 children with acute arthritis. | Ilharreborde B, Bidet P, Lorrot M, Even J, Mariani-Kurkdjian P, Liguori S, Vitoux C, Lefevre Y, Doit C, Fitoussi F, Pennecot G, Bingen E, Mazda K, Bonacorsi S. | J Clin Microbiol | 10.1128/jcm.00144-09 | 2009 | |
| Pathogenicity | Effect of respiratory inhibitors and quinone analogues on the aerobic electron transport system of Eikenella corrodens. | Jaramillo-Lanchero RD, Suarez-Alvarez P, Teheran-Sierra L | Sci Rep | 10.1038/s41598-021-88388-0 | 2021 | |
| Enzymology | Purification and characterization of hemolysin from periodontopathogenic bacterium Eikenella corrodens strain 1073. | Jasin Mansur F, Takahara S, Yamamoto M, Shimatani M, Minnatul Karim M, Noiri Y, Ebisu S, Azakami H | Biosci Biotechnol Biochem | 10.1080/09168451.2017.1295807 | 2017 | |
| Cultivation | Production of antagonistic substance by Eikenella corrodens isolated from the oral cavity of human beings with and without periodontal disease. | Apolonio AC, Carvalho MA, Ribas RN, Sousa-Gaia LG, Santos KV, Lana MA, Nicoli JR, Farias LM | J Appl Microbiol | 10.1111/j.1365-2672.2006.03211.x | 2007 | |
| Pathogenicity | Variable serum immunoglobulin G immune response to genetically distinct Eikenella corrodens strains coexisting in the human oral cavity. | Chen C, Ashimoto A | Oral Microbiol Immunol | 10.1111/j.1399-302x.1998.tb00727.x | 1998 | |
| Pathogenicity | Characterization of an antiproliferative surface-associated protein from Actinobacillus actinomycetemcomitans which can be neutralized by sera from a proportion of patients with localized juvenile periodontitis. | White PA, Wilson M, Nair SP, Kirby AC, Reddi K, Henderson B | Infect Immun | 10.1128/iai.63.7.2612-2618.1995 | 1995 | |
| Metabolism | Some observations on the nutritional requirements of Eikenella corrodens ATCC 23834T grown in continuous culture. | Gully NJ, Rogers AH | Oral Microbiol Immunol | 10.1111/j.1399-302x.1995.tb00129.x | 1995 | |
| Scanning electron microscopy of Eikenella corrodens colony morphology variants. | Cobb CM, Helber JT, Hirschberg R | J Periodontal Res | 10.1111/j.1600-0765.1994.tb01242.x | 1994 | ||
| Pathogenicity | Development of a genetic system for Eikenella corrodens: transfer of plasmids pFM739 and pLES2. | Rao VK, Whitlock JA, Progulske-Fox A | Plasmid | 10.1006/plas.1993.1062 | 1993 | |
| Enzymology | Sequence divergence in two tandemly located pilin genes of Eikenella corrodens. | Tonjum T, Weir S, Bovre K, Progulske-Fox A, Marrs CF | Infect Immun | 10.1128/iai.61.5.1909-1916.1993 | 1993 | |
| Pathogenicity | Identification of a streptomycin resistance gene and a partial Tn3 transposon coding for a beta-lactamase in a periodontal strain of Eikenella corrodens. | Lacroix JM, Walker CB | Antimicrob Agents Chemother | 10.1128/AAC.36.4.740 | 1992 | |
| Pathogenicity | Susceptibility of Eikenella corrodens to newer and older quinolones. | Goldstein EJ, Citron DM, Vagvolgyi AE, Gombert ME | Antimicrob Agents Chemother | 10.1128/AAC.30.1.172 | 1986 | |
| Pathogenicity | Biological activities of Eikenella corrodens outer membrane and lipopolysaccharide. | Progulske A, Mishell R, Trummel C, Holt SC | Infect Immun | 10.1128/iai.43.1.178-182.1984 | 1984 | |
| Pathogenicity | Transmission-scanning electron microscopic observations of selected Eikenella corrodens strains. | Progulske A, Holt SC | J Bacteriol | 10.1128/jb.143.2.1003-1018.1980 | 1980 | |
| Phylogeny | Bordetella holmesii sp. nov., a new gram-negative species associated with septicemia. | Weyant RS, Hollis DG, Weaver RE, Amin MF, Steigerwalt AG, O'Connor SP, Whitney AM, Daneshvar MI, Moss CW, Brenner DJ. | J Clin Microbiol | 10.1128/jcm.33.1.1-7.1995 | 1995 | |
| Phylogeny | Eikenella glucosivorans sp. nov., isolated from a human throat swab, and emendation of the genus Eikenella to include saccharolytic species. | Hering S, Jansson MK, Buhl MEJ | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004977 | 2021 | |
| Phylogeny | Eikenella exigua sp. nov., isolated from brain abscess and blood. | Stormo KA, Nygaard RM, Bruvold TS, Dimmen G, Lindemann PC, Jordal S, Kommedal O | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003827 | 2019 |
| #3257 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 8340 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #33476 | ; Curators of the CIP; |
| #44497 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2138 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68377 | Automatically annotated from API NH . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #118756 | Collection of Institut Pasteur ; Curators of the CIP; CIP 70.75 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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