Mycobacterium abscessus subsp. massiliense DSM 45103 is a microaerophile, mesophilic, Gram-positive human pathogen that was isolated from human sputum and bronchial alveolar lavage of 50 year old woman.
Gram-positive microaerophile mesophilic human pathogen genome sequence 16S sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Mycobacteriaceae |
| Genus Mycobacterium |
| Species Mycobacterium abscessus subsp. massiliense |
| Full scientific name Mycobacterium abscessus subsp. massiliense (Adékambi et al. 2006) Tortoli et al. 2016 |
| Synonyms (2) |
| BacDive ID | Other strains from Mycobacterium abscessus subsp. massiliense (2) | Type strain |
|---|---|---|
| 169568 | M. abscessus subsp. massiliense 19005109, DSM 113267 | |
| 169569 | M. abscessus subsp. massiliense 20004644, DSM 113268 |
| @ref: | 12345 |
| multimedia content: | DSM_45103-1.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_45103-1.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 12345 |
| multimedia content: | DSM_45103-2.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_45103-2.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 12345 |
| multimedia content: | DSM_45103-3.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_45103-3.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 12345 |
| multimedia content: | DSM_45103-5.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_45103-5.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 12345 |
| multimedia content: | DSM_45103.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_45103.jpg |
| caption: | Medium 645 37°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 12345 | MIDDLEBROOK MEDIUM (DSMZ Medium 645) | Medium recipe at MediaDive | Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water | ||
| 115979 | CIP Medium 45 | Medium recipe at CIP | |||
| 115979 | CIP Medium 55 | Medium recipe at CIP |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 115979 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 115979 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 115979 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 115979 | ornithine decarboxylase | - | 4.1.1.17 | |
| 115979 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 115979 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Human | #Female | |
| #Host Body Product | #Oral cavity and Airways | #Bronchial wash | |
| #Host Body Product | #Fluids | #Sputum |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | Isolation date | |
|---|---|---|---|---|---|---|---|
| 12345 | human sputum and bronchial alveolar lavage of 50 year old woman | France | FRA | Europe | |||
| 58389 | Human sputum and bronchial alveolar lavage,50y.w. | Marseille | France | FRA | Europe | ||
| 67770 | Sputum of a patient with hemoptoic pneumonia | ||||||
| 67771 | From Human sputum and bronchial alveolar lavage, 50y.w. | Marseille | France | FRA | Europe | ||
| 115979 | Human, Sputum | Marseille | France | FRA | Europe | 2001 |
Global distribution of 16S sequence AY593980 (>99% sequence identity) for Mycobacteroides from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM49726v2 assembly for Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300 | complete | 1001714 | 98.78 | ||||
| 67770 | ASM23905v2 assembly for Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300 | contig | 1001714 | 75.28 | ||||
| 67770 | ASM208637v1 assembly for Mycobacteroides abscessus subsp. massiliense CCUG 48898 | contig | 1962118 | 74 | ||||
| 67770 | ASM27066v1 assembly for Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300 | contig | 1001714 | 73.28 | ||||
| 66792 | ASM179262v1 assembly for Mycobacteroides abscessus subsp. massiliense CIP 108297 | contig | 1962118 | 63.04 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Mycobacterium massiliense 16S-23S ribosomal RNA intergenic spacer, partial sequence | AY593978 | 258 | 319705 | ||
| 20218 | Mycobacterium massiliense strain CIP 108297 16S ribosomal RNA gene, partial sequence | EU191912 | 457 | 319705 | ||
| 12345 | Mycobacterium abscessus subsp. bolletii strain CCUG 48898 16S ribosomal RNA gene, partial sequence | AY593980 | 1481 | 1962118 | ||
| 67770 | Mycobacterium abscessus subsp. bolletii gene for 16S ribosomal RNA, partial sequence, strain: JCM 15300 | AB548602 | 1468 | 1001714 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 92.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 74.60 | no |
| 125439 | motility | BacteriaNetⓘ | no | 50.20 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 79.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.30 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.58 | no |
| 125438 | aerobic | aerobicⓘ | yes | 87.57 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 63.82 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 92.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| In Vitro Activity of the Sudapyridine (WX-081) against Non-Tuberculous Mycobacteria Isolated in Beijing, China. | Zhu R, Shang Y, Chen S, Xiao H, Ren R, Wang F, Xue Y, Li L, Li Y, Chu N, Huang H. | Microbiol Spectr | 10.1128/spectrum.01372-22 | 2022 | ||
| Molecular longitudinal tracking of Mycobacterium abscessus spp. during chronic infection of the human lung. | Kreutzfeldt KM, McAdam PR, Claxton P, Holmes A, Seagar AL, Laurenson IF, Fitzgerald JR. | PLoS One | 10.1371/journal.pone.0063237 | 2013 | ||
| Phylogeny | Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera. | Gupta RS, Lo B, Son J. | Front Microbiol | 10.3389/fmicb.2018.00067 | 2018 | |
| Genetics | Genomic-enabled classification of three Mycobacteroides abscessus subspecies and an effective subspecies-specific identification method. | Yu Z, Wang R. | J Clin Microbiol | 10.1128/jcm.00697-25 | 2025 | |
| Aortic endograft infection by Mycobacterium abscessus subsp. massiliense with acquired clarithromycin resistance: a case report. | Akiyama Y, Iwamoto N, Kamada K, Yoshida A, Osugi A, Mitarai S, Suzuki T, Yamamoto K, Nagashima M, Horai T, Ohmagari N. | BMC Infect Dis | 10.1186/s12879-023-08702-1 | 2023 | ||
| A potent phenylalkylamine disrupts mycobacterial membrane bioenergetics and augments bactericidal activity of bedaquiline. | Phua ZY, Li M, Ali A, Cheong CCS, Goh KJ, Seto MYK, Ng ASY, Sarathy JP, Goh BC, Go ML, Chui WK, Dick T, Lam Y. | iScience | 10.1016/j.isci.2025.112915 | 2025 | ||
| Broad-Spectrum In Vitro Activity of Nalpha-Aroyl-N-Aryl-Phenylalanine Amides against Non-Tuberculous Mycobacteria and Comparative Analysis of RNA Polymerases. | Lang M, Ganapathy US, Abdelaziz R, Dick T, Richter A. | Antibiotics (Basel) | 10.3390/antibiotics13050404 | 2024 | ||
| Genetics | Transposon-sequencing across multiple Mycobacterium abscessus isolates reveals significant functional genomic diversity among strains. | Akusobi C, Choudhery S, Benghomari BS, Wolf ID, Singhvi S, Ioerger TR, Rubin EJ. | mBio | 10.1128/mbio.03376-24 | 2025 | |
| Toward a Bactericidal Oral Drug Combination for the Treatment of Mycobacterium abscessus Lung Disease. | Sarathy JP, Xie M, Wong CF, Negatu DA, Rodriguez S, Zimmerman MD, Jimenez DC, Alshiraihi IM, Gonzalez-Juarrero M, Dartois V, Dick T. | ACS Infect Dis | 10.1021/acsinfecdis.4c00948 | 2025 | ||
| Carbonyl Cyanide 3-Chlorophenylhydrazone (CCCP) Exhibits Direct Antibacterial Activity Against Mycobacterium abscessus. | Chen S, Teng T, Zhang Z, Shang Y, Xiao H, Jiang G, Wang F, Jia J, Dong L, Zhao L, Chu N, Huang H. | Infect Drug Resist | 10.2147/idr.s303113 | 2021 | ||
| Mycobacterium tuberculosis DprE1 Inhibitor OPC-167832 Is Active against Mycobacterium abscessus In Vitro. | Sarathy JP, Zimmerman MD, Gengenbacher M, Dartois V, Dick T. | Antimicrob Agents Chemother | 10.1128/aac.01237-22 | 2022 | ||
| Disulfiram Is Effective against Drug-Resistant Mycobacterium abscessus in a Zebrafish Embryo Infection Model. | Winters CG, Basnet RM, Faasuamalie PE, Shallom SJ, Zelazny AM, Gupta S, Olivier KN. | Antimicrob Agents Chemother | 10.1128/aac.00539-22 | 2022 | ||
| Pathogenicity | TBAJ-876, a 3,5-Dialkoxypyridine Analogue of Bedaquiline, Is Active against Mycobacterium abscessus. | Sarathy JP, Ganapathy US, Zimmerman MD, Dartois V, Gengenbacher M, Dick T. | Antimicrob Agents Chemother | 10.1128/aac.02404-19 | 2020 | |
| Rifabutin Suppresses Inducible Clarithromycin Resistance in Mycobacterium abscessus by Blocking Induction of whiB7 and erm41. | Aziz DB, Go ML, Dick T. | Antibiotics (Basel) | 10.3390/antibiotics9020072 | 2020 | ||
| Genomic epidemiology of Mycobacterium abscessus in a Canadian cystic fibrosis centre. | Waglechner N, Tullis E, Stephenson AL, Waters V, McIntosh F, Ma J, Jamieson FB, Behr MA, Batt J, Lee RS. | Sci Rep | 10.1038/s41598-022-19666-8 | 2022 | ||
| Pathogenicity | Rifabutin Is Active against Mycobacterium abscessus Complex. | Aziz DB, Low JL, Wu ML, Gengenbacher M, Teo JWP, Dartois V, Dick T. | Antimicrob Agents Chemother | 10.1128/aac.00155-17 | 2017 | |
| Complete Genome Sequence of Mycobacterium abscessus subsp. bolletii. | Caverly LJ, Spilker T, LiPuma JJ. | Genome Announc | 10.1128/genomea.00543-16 | 2016 | ||
| Phylogeny | Phylogenomics of Brazilian epidemic isolates of Mycobacterium abscessus subsp. bolletii reveals relationships of global outbreak strains. | Davidson RM, Hasan NA, de Moura VC, Duarte RS, Jackson M, Strong M. | Infect Genet Evol | 10.1016/j.meegid.2013.09.012 | 2013 | |
| Teicoplanin - Tigecycline Combination Shows Synergy Against Mycobacterium abscessus. | Aziz DB, Teo JWP, Dartois V, Dick T. | Front Microbiol | 10.3389/fmicb.2018.00932 | 2018 | ||
| Increased Virulence of Outer Membrane Porin Mutants of Mycobacterium abscessus. | de Moura VCN, Verma D, Everall I, Brown KP, Belardinelli JM, Shanley C, Stapleton M, Parkhill J, Floto RA, Ordway DJ, Jackson M. | Front Microbiol | 10.3389/fmicb.2021.706207 | 2021 | ||
| A Two-Step Real-Time PCR Method To Identify Mycobacterium tuberculosis Infections and Six Dominant Nontuberculous Mycobacterial Infections from Clinical Specimens. | Park J, Kwak N, Chae JC, Yoon EJ, Jeong SH. | Microbiol Spectr | 10.1128/spectrum.01606-23 | 2023 | ||
| Phylogeny | New rapid scheme for distinguishing the subspecies of the Mycobacterium abscessus group and identifying Mycobacterium massiliense isolates with inducible clarithromycin resistance. | Shallom SJ, Gardina PJ, Myers TG, Sebastian Y, Conville P, Calhoun LB, Tettelin H, Olivier KN, Uzel G, Sampaio EP, Holland SM, Zelazny AM. | J Clin Microbiol | 10.1128/jcm.01132-13 | 2013 | |
| Genome Sequence of an Epidemic Isolate of Mycobacterium abscessus subsp. bolletii from Rio de Janeiro, Brazil. | Davidson RM, Reynolds PR, Farias-Hesson E, Duarte RS, Jackson M, Strong M. | Genome Announc | 10.1128/genomea.00617-13 | 2013 | ||
| Genetics | GenoType NTM-DR Performance Evaluation for Identification of Mycobacterium avium Complex and Mycobacterium abscessus and Determination of Clarithromycin and Amikacin Resistance. | Huh HJ, Kim SY, Shim HJ, Kim DH, Yoo IY, Kang OK, Ki CS, Shin SY, Jhun BW, Shin SJ, Daley CL, Koh WJ, Lee NY. | J Clin Microbiol | 10.1128/jcm.00516-19 | 2019 | |
| Metabolism | Comprehensive Comparative Analysis of Cholesterol Catabolic Genes/Proteins in Mycobacterial Species. | van Wyk R, van Wyk M, Mashele SS, Nelson DR, Syed K. | Int J Mol Sci | 10.3390/ijms20051032 | 2019 | |
| Inducible and Acquired Clarithromycin Resistance in the Mycobacterium abscessus Complex. | Rubio M, March F, Garrigo M, Moreno C, Espanol M, Coll P. | PLoS One | 10.1371/journal.pone.0140166 | 2015 | ||
| Phylogeny | Variation among human, veterinary and environmental Mycobacterium chelonae-abscessus complex isolates observed using core genome phylogenomic analysis, targeted gene comparison, and anti-microbial susceptibility patterns. | Fogelson SB, Camus AC, Lorenz WW, Vasireddy R, Vasireddy S, Smith T, Brown-Elliott BA, Wallace RJ, Hasan NA, Reischl U, Sanchez S. | PLoS One | 10.1371/journal.pone.0214274 | 2019 | |
| Phylogeny | Phylogenetic analysis of Mycobacterium massiliense strains having recombinant rpoB gene laterally transferred from Mycobacterium abscessus. | Kim BJ, Kim GN, Kim BR, Shim TS, Kook YH, Kim BJ. | PLoS One | 10.1371/journal.pone.0179237 | 2017 | |
| Genetics | MabsBase: a Mycobacterium abscessus genome and annotation database. | Heydari H, Wee WY, Lokanathan N, Hari R, Mohamed Yusoff A, Beh CY, Yazdi AH, Wong GJ, Ngeow YF, Choo SW. | PLoS One | 10.1371/journal.pone.0062443 | 2013 | |
| beta-Lactam Combinations That Exhibit Synergy against Mycobacteroides abscessus Clinical Isolates. | Story-Roller E, Galanis C, Lamichhane G. | Antimicrob Agents Chemother | 10.1128/aac.02545-20 | 2021 | ||
| Phylogeny | Diversity of pulsed-field gel electrophoresis patterns of Mycobacterium abscessus type 2 clinical isolates. | Matsumoto CK, Chimara E, Bombarda S, Duarte RS, Leao SC. | J Clin Microbiol | 10.1128/jcm.01665-10 | 2011 | |
| Genetics | Genome analysis reveals three genomospecies in Mycobacterium abscessus. | Sassi M, Drancourt M. | BMC Genomics | 10.1186/1471-2164-15-359 | 2014 | |
| Phylogeny | Multilocus sequence typing scheme versus pulsed-field gel electrophoresis for typing Mycobacterium abscessus isolates. | Machado GE, Matsumoto CK, Chimara E, Duarte Rda S, de Freitas D, Palaci M, Hadad DJ, Lima KV, Lopes ML, Ramos JP, Campos CE, Caldas PC, Heym B, Leao SC. | J Clin Microbiol | 10.1128/jcm.00688-14 | 2014 | |
| The detection and sequencing of a broad-host-range conjugative IncP-1beta plasmid in an epidemic strain of Mycobacterium abscessus subsp. bolletii. | Leao SC, Matsumoto CK, Carneiro A, Ramos RT, Nogueira CL, Lima JD, Lima KV, Lopes ML, Schneider H, Azevedo VA, da Costa da Silva A. | PLoS One | 10.1371/journal.pone.0060746 | 2013 | ||
| Phylogeny | New Mycobacteroides abscessus subsp. massiliense strains with recombinant hsp65 gene laterally transferred from Mycobacteroides abscessus subsp. abscessus: Potential for misidentification of M. abscessus strains with the hsp65-based method. | Kim BJ, Kim GN, Kim BR, Shim TS, Kook YH, Kim BJ. | PLoS One | 10.1371/journal.pone.0220312 | 2019 | |
| Pathogenicity | Multidrug-resistant nontuberculous mycobacteria isolated from cystic fibrosis patients. | Candido PH, Nunes Lde S, Marques EA, Folescu TW, Coelho FS, de Moura VC, da Silva MG, Gomes KM, Lourenco MC, Aguiar FS, Chitolina F, Armstrong DT, Leao SC, Neves FP, Mello FC, Duarte RS. | J Clin Microbiol | 10.1128/jcm.00549-14 | 2014 | |
| Genetics | Genomic reconnaissance of clinical isolates of emerging human pathogen Mycobacterium abscessus reveals high evolutionary potential. | Choo SW, Wee WY, Ngeow YF, Mitchell W, Tan JL, Wong GJ, Zhao Y, Xiao J. | Sci Rep | 10.1038/srep04061 | 2014 | |
| Enzymology | An enoyl-ACP reductase inhibitor, NITD-916, expresses anti-Mycobacterium abscessus activity. | Jia Y, Fan J, Tan Z, Li A, He S, Lin Y, Li J, Zhang Z, Li B, Chu H. | Antimicrob Agents Chemother | 10.1128/aac.00249-25 | 2025 | |
| TBAJ-587, a novel diarylquinoline, is active against Mycobacterium abscessus. | Fan J, Tan Z, He S, Li A, Jia Y, Li J, Zhang Z, Li B, Chu H. | Antimicrob Agents Chemother | 10.1128/aac.00945-24 | 2024 | ||
| A Novel Leucyl-tRNA Synthetase Inhibitor, MRX-6038, Expresses Anti-Mycobacterium abscessus Activity In Vitro and In Vivo. | Wu W, He S, Li A, Guo Q, Tan Z, Liu S, Wang X, Zhang Z, Li B, Chu H. | Antimicrob Agents Chemother | 10.1128/aac.00601-22 | 2022 | ||
| Analysis of Phenotypic and Genotypic Susceptibility to Clarithromycin and Amikacin of Mycobacterium abscessus Complex Strains Isolated from Cystic Fibrosis Patients. | Cao Yao JC, Navas Mendez J, Tortola Fernandez MT. | Microorganisms | 10.3390/microorganisms11122897 | 2023 | ||
| Sitafloxacin Expresses Potent Anti-Mycobacterium abscessus Activity. | He S, Guo Q, Zhao L, Xu L, Fan J, Wu W, Zhang Z, Li B, Chu H. | Front Microbiol | 10.3389/fmicb.2021.779531 | 2021 | ||
| Omadacycline, Eravacycline, and Tigecycline Express Anti-Mycobacterium abscessus Activity In Vitro. | Li A, He S, Li J, Zhang Z, Li B, Chu H. | Microbiol Spectr | 10.1128/spectrum.00718-23 | 2023 | ||
| 2-Aminoimidazoles Inhibit Mycobacterium abscessus Biofilms in a Zinc-Dependent Manner. | Belardinelli JM, Li W, Martin KH, Zeiler MJ, Lian E, Avanzi C, Wiersma CJ, Nguyen TV, Angala B, de Moura VCN, Jones V, Borlee BR, Melander C, Jackson M. | Int J Mol Sci | 10.3390/ijms23062950 | 2022 | ||
| Toward better cures for Mycobacterium abscessus lung disease. | Dartois V, Dick T. | Clin Microbiol Rev | 10.1128/cmr.00080-23 | 2024 | ||
| A laboratory perspective on Mycobacterium abscessus biofilm culture, characterization and drug activity testing. | Meliefste HM, Mudde SE, Ammerman NC, de Steenwinkel JEM, Bax HI. | Front Microbiol | 10.3389/fmicb.2024.1392606 | 2024 | ||
| Preclinical murine models for the testing of antimicrobials against Mycobacterium abscessus pulmonary infections: Current practices and recommendations. | Dartois V, Bonfield TL, Boyce JP, Daley CL, Dick T, Gonzalez-Juarrero M, Gupta S, Kramnik I, Lamichhane G, Laughon BE, Lore NI, Malcolm KC, Olivier KN, Tuggle KL, Jackson M. | Tuberculosis (Edinb) | 10.1016/j.tube.2024.102503 | 2024 | ||
| Mycobacterium abscessus resists the innate cellular response by surviving cell lysis of infected phagocytes. | Toure H, Galindo LA, Lagune M, Glatigny S, Waterhouse RM, Guenal I, Herrmann JL, Girard-Misguich F, Szuplewski S. | PLoS Pathog | 10.1371/journal.ppat.1011257 | 2023 | ||
| Pathogenicity | Disinfectant Susceptibility Profiling of Glutaraldehyde-Resistant Nontuberculous Mycobacteria. | Burgess W, Margolis A, Gibbs S, Duarte RS, Jackson M. | Infect Control Hosp Epidemiol | 10.1017/ice.2017.75 | 2017 | |
| Comparing the Utilities of Different Multilocus Sequence Typing Schemes for Identifying Outbreak Strains of Mycobacterium abscessus subsp. massiliense. | Cheng A, Sun HY, Tsai YT, Chang SY, Wu UI, Hsueh PR, Sheng WH, Chen YC, Chang SC. | J Clin Microbiol | 10.1128/jcm.01304-19 | 2019 | ||
| Phylogeny | Classification algorithm for subspecies identification within the Mycobacterium abscessus species, based on matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Fangous MS, Mougari F, Gouriou S, Calvez E, Raskine L, Cambau E, Payan C, Hery-Arnaud G. | J Clin Microbiol | 10.1128/jcm.00788-14 | 2014 | |
| Genetics | Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications. | Sapriel G, Konjek J, Orgeur M, Bouri L, Frezal L, Roux AL, Dumas E, Brosch R, Bouchier C, Brisse S, Vandenbogaert M, Thiberge JM, Caro V, Ngeow YF, Tan JL, Herrmann JL, Gaillard JL, Heym B, Wirth T. | BMC Genomics | 10.1186/s12864-016-2448-1 | 2016 | |
| MmpL3 as a Target for the Treatment of Drug-Resistant Nontuberculous Mycobacterial Infections. | Li W, Yazidi A, Pandya AN, Hegde P, Tong W, Calado Nogueira de Moura V, North EJ, Sygusch J, Jackson M. | Front Microbiol | 10.3389/fmicb.2018.01547 | 2018 | ||
| Enzymology | Sacroiliitis secondary to catheter-related bacteremia due to Mycobacterium abscessus (sensu stricto). | Laurens C, Hery-Arnaud G, Chiron R, Oziol E, Jean-Pierre H, Bouzinbi N, Vande Perre P, Banuls AL, Godreuil S. | Ann Clin Microbiol Antimicrob | 10.1186/1476-0711-13-9 | 2014 | |
| Increased survival and proliferation of the epidemic strain Mycobacterium abscessus subsp. massiliense CRM0019 in alveolar epithelial cells. | Ribeiro GM, Matsumoto CK, Real F, Teixeira D, Duarte RS, Mortara RA, Leao SC, de Souza Carvalho-Wodarz C. | BMC Microbiol | 10.1186/s12866-017-1102-7 | 2017 | ||
| Enzymology | Mycobacterium massiliense bacteremia as a consequence of M. massiliense pneumonia in a patient with acute lymphoblastic leukemia. | Kim J, Park JS, Jeong YS, Kim DY, Sung H, Kim MN. | J Clin Microbiol | 10.1128/jcm.03543-13 | 2014 | |
| Enzymology | Development of a One-Step Multiplex PCR Assay for Differential Detection of Major Mycobacterium Species. | Chae H, Han SJ, Kim SY, Ki CS, Huh HJ, Yong D, Koh WJ, Shin SJ. | J Clin Microbiol | 10.1128/jcm.00549-17 | 2017 | |
| Phylogeny | Molecular characterization of Mycobacterium massiliense and Mycobacterium bolletii in isolates collected from outbreaks of infections after laparoscopic surgeries and cosmetic procedures. | Viana-Niero C, Lima KV, Lopes ML, Rabello MC, Marsola LR, Brilhante VC, Durham AM, Leao SC. | J Clin Microbiol | 10.1128/jcm.02052-07 | 2008 | |
| Phylogeny | Cohort study of molecular identification and typing of Mycobacterium abscessus, Mycobacterium massiliense, and Mycobacterium bolletii. | Zelazny AM, Root JM, Shea YR, Colombo RE, Shamputa IC, Stock F, Conlan S, McNulty S, Brown-Elliott BA, Wallace RJ, Olivier KN, Holland SM, Sampaio EP. | J Clin Microbiol | 10.1128/jcm.01688-08 | 2009 | |
| Pathogenicity | Assessment of clarithromycin susceptibility in strains belonging to the Mycobacterium abscessus group by erm(41) and rrl sequencing. | Bastian S, Veziris N, Roux AL, Brossier F, Gaillard JL, Jarlier V, Cambau E. | Antimicrob Agents Chemother | 10.1128/aac.00861-10 | 2011 | |
| Enzymology | Outbreak of Mycobacterium massiliense infection associated with intramuscular injections. | Kim HY, Yun YJ, Park CG, Lee DH, Cho YK, Park BJ, Joo SI, Kim EC, Hur YJ, Kim BJ, Kook YH. | J Clin Microbiol | 10.1128/jcm.00608-07 | 2007 | |
| Phylogeny | Proportions of Mycobacterium massiliense and Mycobacterium bolletii strains among Korean Mycobacterium chelonae-Mycobacterium abscessus group isolates. | Kim HY, Kook Y, Yun YJ, Park CG, Lee NY, Shim TS, Kim BJ, Kook YH. | J Clin Microbiol | 10.1128/jcm.00319-08 | 2008 | |
| Metabolism | Mycobacterium massiliense Induces Macrophage Extracellular Traps with Facilitating Bacterial Growth. | Je S, Quan H, Yoon Y, Na Y, Kim BJ, Seok SH. | PLoS One | 10.1371/journal.pone.0155685 | 2016 | |
| Phylogeny | Rapid identification of mycobacterial whole cells in solid and liquid culture media by matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Lotz A, Ferroni A, Beretti JL, Dauphin B, Carbonnelle E, Guet-Revillet H, Veziris N, Heym B, Jarlier V, Gaillard JL, Pierre-Audigier C, Frapy E, Berche P, Nassif X, Bille E. | J Clin Microbiol | 10.1128/jcm.01397-10 | 2010 | |
| Enzymology | Epidemic of postsurgical infections caused by Mycobacterium massiliense. | Duarte RS, Lourenco MC, Fonseca Lde S, Leao SC, Amorim Ede L, Rocha IL, Coelho FS, Viana-Niero C, Gomes KM, da Silva MG, Lorena NS, Pitombo MB, Ferreira RM, Garcia MH, de Oliveira GP, Lupi O, Vilaca BR, Serradas LR, Chebabo A, Marques EA, Teixeira LM, Dalcolmo M, Senna SG, Sampaio JL. | J Clin Microbiol | 10.1128/jcm.00027-09 | 2009 | |
| Metabolism | Discovery of a novel hsp65 genotype within Mycobacterium massiliense associated with the rough colony morphology. | Kim BJ, Yi SY, Shim TS, Do SY, Yu HK, Park YG, Kook YH, Kim BJ. | PLoS One | 10.1371/journal.pone.0038420 | 2012 | |
| Phylogeny | Development of a peptide nucleic acid-based multiprobe real-time PCR method targeting the hsp65 gene for differentiation among Mycobacterium abscessus strains. | Kim K, Kim BJ, Shim TS, Hong SH, Kook YH, Kim BJ. | J Clin Microbiol | 10.1128/jcm.03424-14 | 2015 | |
| Genetics | Potential Cross-Transmission of Mycobacterium abscessus among Non-Cystic Fibrosis Patients at a Tertiary Hospital in Japan. | Fujiwara K, Yoshida M, Murase Y, Aono A, Furuuchi K, Tanaka Y, Ohta K, Ato M, Mitarai S, Morimoto K. | Microbiol Spectr | 10.1128/spectrum.00097-22 | 2022 | |
| Delineating Mycobacterium abscessus population structure and transmission employing high-resolution core genome multilocus sequence typing. | Diricks M, Merker M, Wetzstein N, Kohl TA, Niemann S, Maurer FP. | Nat Commun | 10.1038/s41467-022-32122-5 | 2022 | ||
| Pathogenicity | A novel DNA chromatography method to discriminate Mycobacterium abscessus subspecies and macrolide susceptibility. | Yoshida M, Sano S, Chien JY, Fukano H, Suzuki M, Asakura T, Morimoto K, Murase Y, Miyamoto S, Kurashima A, Hasegawa N, Hsueh PR, Mitarai S, Ato M, Hoshino Y. | EBioMedicine | 10.1016/j.ebiom.2020.103187 | 2021 | |
| Association between 16S rRNA gene mutations and susceptibility to amikacin in Mycobacterium avium Complex and Mycobacterium abscessus clinical isolates. | Kim SY, Kim DH, Moon SM, Song JY, Huh HJ, Lee NY, Shin SJ, Koh WJ, Jhun BW. | Sci Rep | 10.1038/s41598-021-85721-5 | 2021 | ||
| Pathogenicity | In Vitro Synergism of Rifabutin with Clarithromycin, Imipenem, and Tigecycline against the Mycobacterium abscessus Complex. | Cheng A, Tsai YT, Chang SY, Sun HY, Wu UI, Sheng WH, Chen YC, Chang SC. | Antimicrob Agents Chemother | 10.1128/aac.02234-18 | 2019 | |
| Phylogeny | Emended description of Mycobacterium abscessus, Mycobacterium abscessus subsp. abscessus and Mycobacteriumabscessus subsp. bolletii and designation of Mycobacteriumabscessus subsp. massiliense comb. nov. | Tortoli E, Kohl TA, Brown-Elliott BA, Trovato A, Leao SC, Garcia MJ, Vasireddy S, Turenne CY, Griffith DE, Philley JV, Baldan R, Campana S, Cariani L, Colombo C, Taccetti G, Teri A, Niemann S, Wallace RJ Jr, Cirillo DM | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001376 | 2016 | |
| Genetics | Complete genome sequence and comparative genomic analysis of Mycobacterium massiliense JCM 15300 in the Mycobacterium abscessus group reveal a conserved genomic island MmGI-1 related to putative lipid metabolism. | Sekizuka T, Kai M, Nakanaga K, Nakata N, Kazumi Y, Maeda S, Makino M, Hoshino Y, Kuroda M | PLoS One | 10.1371/journal.pone.0114848 | 2014 | |
| Genetics | Discrimination of Mycobacterium abscessus subsp. massiliense from Mycobacterium abscessus subsp. abscessus in clinical isolates by multiplex PCR. | Nakanaga K, Sekizuka T, Fukano H, Sakakibara Y, Takeuchi F, Wada S, Ishii N, Makino M, Kuroda M, Hoshino Y | J Clin Microbiol | 10.1128/JCM.01327-13 | 2013 | |
| Genetics | Genomic insights into the emerging human pathogen Mycobacterium massiliense. | Tettelin H, Sampaio EP, Daugherty SC, Hine E, Riley DR, Sadzewicz L, Sengamalay N, Shefchek K, Su Q, Tallon LJ, Conville P, Olivier KN, Holland SM, Fraser CM, Zelazny AM | J Bacteriol | 10.1128/JB.01200-12 | 2012 | |
| Increased virulence of an epidemic strain of Mycobacterium massiliense in mice. | Shang S, Gibbs S, Henao-Tamayo M, Shanley CA, McDonnell G, Duarte RS, Ordway DJ, Jackson M | PLoS One | 10.1371/journal.pone.0024726 | 2011 | ||
| Transcriptome | Multilocus sequence analysis and rpoB sequencing of Mycobacterium abscessus (sensu lato) strains. | Macheras E, Roux AL, Bastian S, Leao SC, Palaci M, Sivadon-Tardy V, Gutierrez C, Richter E, Rusch-Gerdes S, Pfyffer G, Bodmer T, Cambau E, Gaillard JL, Heym B | J Clin Microbiol | 10.1128/JCM.01274-10 | 2010 | |
| Genetics | The genome sequence of 'Mycobacterium massiliense' strain CIP 108297 suggests the independent taxonomic status of the Mycobacterium abscessus complex at the subspecies level. | Cho YJ, Yi H, Chun J, Cho SN, Daley CL, Koh WJ, Shin SJ | PLoS One | 10.1371/journal.pone.0081560 | 2013 | |
| Phylogeny | Amoebal coculture of "Mycobacterium massiliense" sp. nov. from the sputum of a patient with hemoptoic pneumonia. | Adekambi T, Reynaud-Gaubert M, Greub G, Gevaudan MJ, La Scola B, Raoult D, Drancourt M | J Clin Microbiol | 10.1128/JCM.42.12.5493-5501.2004 | 2004 |
| #12345 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45103 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #58389 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 48898 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #67771 | Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC; |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #115979 | Collection of Institut Pasteur ; Curators of the CIP; CIP 108297 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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