Name: Psychrobacter aquaticus DSM 15339
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 8198

Type strain:

Species: Psychrobacter aquaticus

Culture col. no.: DSM 15339, MTCC 4386, CMS 56, CIP 108799

Strain history: CIP <- 2005, MTCC <- S. Shivaji: strain CMS56

NCBI tax ID(s): 1354303 (strain), 248452 (species)

SI-ID 138035

DSM 15339, CIP 108799

Special Collections

Section

Psychrobacter aquaticus DSM 15339 is an aerobe, Gram-negative, coccus-shaped bacterium that forms circular colonies and was isolated from cyanobacterial mat sample.

coccus-shaped
colony-forming
Gram-negative
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Psychrobacter*
	Species	**Psychrobacter aquaticus**
	Full Scientific Name (LPSN)	Psychrobacter aquaticus Shivaji et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #30176]	Gram stain	negative
[Ref.: #116437]	Gram stain	negative

[Ref.: #30176]	Cell shape	coccus-shaped
[Ref.: #116437]	Cell shape	coccus-shaped
[Ref.: #26525]	Cell shape	coccus-shaped

[Ref.: #30176]	Motility	no
[Ref.: #116437]	Motility	no
[Ref.: #26525]	Motility	no

[Ref.: #26525]	Colony size	2-3 mm
[Ref.: #26525]	Colony shape	circular
[Ref.: #26525]	Cultivation medium used	ZoBell Marine 2296 agar

[Ref.: #30176]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5854]

Culture medium

OXOID NUTRIENT BROTH (DSMZ Medium 948)

[Ref.: #5854]

Culture medium growth

[Ref.: #5854]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5854]

Culture medium composition

expand / minimize

[Ref.: #5854]

Culture medium

NUTRIENT AGAR (OXOID CM3) (DSMZ Medium 605)

[Ref.: #5854]

Culture medium growth

[Ref.: #5854]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5854]

Culture medium composition

expand / minimize

[Ref.: #5854]

Culture medium

LB (Luria-Bertani) MEDIUM (DSMZ Medium 381)

[Ref.: #5854]

Culture medium growth

[Ref.: #5854]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5854]

Culture medium composition

expand / minimize

[Ref.: #38181]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #38181]

Culture medium growth

[Ref.: #38181]

Culture medium composition

expand / minimize

[Ref.: #26525]

Culture medium

ZoBell Marine 2296 agar

[Ref.: #26525]

Culture medium growth

[Ref.: #116437]

Culture medium

CIP Medium 368

[Ref.: #116437]

Culture medium growth

[Ref.: #116437]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #116437]

Culture medium

CIP Medium 72

[Ref.: #116437]

Culture medium growth

[Ref.: #116437]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5854]		growth	22 °C
[Ref.: #26525]		optimum	22 °C
[Ref.: #26525]		growth	4-30 °C
[Ref.: #30176]		growth	04-30 °C
[Ref.: #30176]		optimum	22 °C
[Ref.: #38181]		growth	22 °C
[Ref.: #116437]		growth	5-30 °C
[Ref.: #116437]	no	growth	37 °C
[Ref.: #116437]	no	growth	41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #26525]	Oxygen tolerance	aerobe
[Ref.: #116437]	Oxygen tolerance	obligate aerobe

	Salt		Salt conc.
[Ref.: #30176]	NaCl	growth	0-10	%
[Ref.: #30176]	NaCl	optimum	5	%
[Ref.: #26525]	NaCl	growth	0-10	%
[Ref.: #116437]	NaCl	growth	0-10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #26525]	acetate ChEBI	-	carbon source
[Ref.: #30176]	alanine ChEBI	+	carbon source
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	arginine ChEBI	-	hydrolysis
[Ref.: #30176]	asparagine ChEBI	+	carbon source
[Ref.: #26525]	butanol ChEBI	-	carbon source
[Ref.: #43400]	cellobiose ChEBI	-	degradation
[Ref.: #26525]	cellulose ChEBI	-	carbon source
[Ref.: #26525]	cellulose ChEBI	-	degradation
[Ref.: #43400]	cellulose ChEBI	-	degradation
[Ref.: #26525]	citrate ChEBI	-	carbon source
[Ref.: #116437]	citrate ChEBI	-	carbon source
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	D-fructose ChEBI	-	carbon source
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	D-glucose ChEBI	-	builds acid from
[Ref.: #43400]	D-glucose ChEBI	+	assimilation
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	D-mannitol ChEBI	-	carbon source
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	D-mannose ChEBI	-	carbon source
[Ref.: #26525]	D-mannose ChEBI	+	builds acid from
[Ref.: #26525]	D-ribose ChEBI	-	carbon source
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	D-xylose ChEBI	-	carbon source
[Ref.: #26525]	dextran ChEBI	-	carbon source
[Ref.: #26525]	erythritol ChEBI	-	carbon source
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	esculin ChEBI	-	hydrolysis
[Ref.: #116437]	esculin ChEBI	-	hydrolysis
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	fumarate ChEBI	-	carbon source
[Ref.: #26525]	galactitol ChEBI	-	carbon source
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	gelatin ChEBI	-	hydrolysis
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	glucose ChEBI	-	fermentation
[Ref.: #26525]	glucose ChEBI	-	carbon source
[Ref.: #30176]	glutamate ChEBI	+	carbon source
[Ref.: #30176]	glycerol ChEBI	+	carbon source
[Ref.: #26525]	glycerol ChEBI	+	carbon source
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	hexadecane ChEBI	-	carbon source
[Ref.: #26525]	inulin ChEBI	-	carbon source
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	L-alanine 4-nitroanilide	+	carbon source
[Ref.: #26525]	L-arabinose ChEBI	-	carbon source
[Ref.: #26525]	L-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	L-arginine ChEBI	-	carbon source
[Ref.: #26525]	L-asparagine ChEBI	-	carbon source
[Ref.: #26525]	L-asparagine ChEBI	+	carbon source
[Ref.: #26525]	L-cysteine ChEBI	-	carbon source
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	L-glutamate ChEBI	+	carbon source
[Ref.: #26525]	L-glutamine ChEBI	-	carbon source
[Ref.: #26525]	L-histidine ChEBI	-	carbon source
[Ref.: #26525]	L-isoleucine ChEBI	-	carbon source
[Ref.: #26525]	L-leucine ChEBI	-	carbon source
[Ref.: #26525]	L-methionine ChEBI	-	carbon source
[Ref.: #26525]	L-phenylalanine ChEBI	+	carbon source
[Ref.: #43400]	L-rhamnose ChEBI	+	assimilation
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	L-serine ChEBI	-	carbon source
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	L-tryptophan ChEBI	-	carbon source
[Ref.: #26525]	L-tyrosine ChEBI	-	carbon source
[Ref.: #26525]	L-tyrosine ChEBI	+	carbon source
[Ref.: #26525]	L-valine ChEBI	-	carbon source
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	lactate ChEBI	-	carbon source
[Ref.: #26525]	lactose ChEBI	-	carbon source
[Ref.: #26525]	lactose ChEBI	-	builds acid from
[Ref.: #26525]	maltose ChEBI	-	carbon source
[Ref.: #43400]	maltose ChEBI	+	assimilation
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43400]	maltotriose ChEBI	+	assimilation
[Ref.: #30176]	mannose ChEBI	+	carbon source
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	melibiose ChEBI	-	carbon source
[Ref.: #26525]	methanol ChEBI	-	carbon source
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	myo-inositol ChEBI	-	carbon source
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #30176]	nitrate ChEBI	+	reduction
[Ref.: #26525]	nitrate ChEBI	+	reduction
[Ref.: #116437]	nitrate ChEBI	+	reduction
[Ref.: #116437]	nitrate ChEBI	-	respiration
[Ref.: #116437]	nitrite ChEBI	-	reduction
[Ref.: #30176]	phenylalanine ChEBI	+	carbon source
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	pyruvate ChEBI	-	carbon source
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	ribitol ChEBI	-	carbon source
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	sorbitol ChEBI	-	carbon source
[Ref.: #26525]	starch ChEBI	-	hydrolysis
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	sucrose ChEBI	-	carbon source
[Ref.: #26525]	sucrose ChEBI	-	builds acid from
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	threonine ChEBI	-	carbon source
[Ref.: #30176]	trehalose ChEBI	+	carbon source
[Ref.: #26525]	trehalose ChEBI	-	carbon source
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #26525]	xanthine ChEBI	-	carbon source
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #26525]	amoxicillin ChEBI	yes	100	µg
[Ref.: #26525]	ampicillin ChEBI	yes	10	µg
[Ref.: #26525]	bacitracin ChEBI	yes	10	µg
[Ref.: #26525]	carbenicillin ChEBI	yes	50	µg
[Ref.: #26525]	chloramphenicol ChEBI	yes	30	µg
[Ref.: #26525]	co-trimoxazole ChEBI	yes	25	µg
[Ref.: #26525]	colistin ChEBI				yes	10	µg
[Ref.: #26525]	erythromycin ChEBI	yes	15	µg
[Ref.: #26525]	gentamicin ChEBI	yes	10	µg
[Ref.: #26525]	lincomycin ChEBI				yes	2	µg
[Ref.: #26525]	nalidixic acid ChEBI	yes	30	µg
[Ref.: #26525]	nitrofurantoin ChEBI	yes	300	µg
[Ref.: #26525]	nystatin ChEBI	yes	100	µg
[Ref.: #26525]	polymyxin b ChEBI	yes	300	µg
[Ref.: #26525]	rifampicin ChEBI	yes	5	µg
[Ref.: #26525]	streptomycin ChEBI	yes	10	µg
[Ref.: #26525]	tetracycline ChEBI	yes	30	µg
[Ref.: #26525]	tobramycin ChEBI	yes	20	µg
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #26525]	acetoin ChEBI	no
[Ref.: #26525]	hydrogen sulfide ChEBI	no
[Ref.: #26525]	indole ChEBI	no
[Ref.: #116437]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Citrate test
[Ref.: #26525]	acetoin ChEBI	-
[Ref.: #116437]	acetoin ChEBI	-
[Ref.: #26525]	citrate ChEBI			-
[Ref.: #26525]	glucose ChEBI		-
[Ref.: #116437]	glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116437]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #30176]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #116437]	amylase	-
[Ref.: #26525]	arginine decarboxylase	-	4.1.1.19
[Ref.: #26525]	beta-galactosidase	-	3.2.1.23
[Ref.: #116437]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116437]	caseinase	-	3.4.21.50
[Ref.: #30176]	catalase	+	1.11.1.6
[Ref.: #26525]	catalase	+	1.11.1.6
[Ref.: #116437]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #30176]	cytochrome oxidase	+	1.9.3.1
[Ref.: #26525]	cytochrome oxidase	+	1.9.3.1
[Ref.: #116437]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #116437]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #116437]	gelatinase	-
[Ref.: #116437]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #26525]	lipase	+
[Ref.: #116437]	lipase	-
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #26525]	lysine decarboxylase	-	4.1.1.18
[Ref.: #116437]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116437]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116437]	oxidase	+
[Ref.: #116437]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #26525]	phosphatase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #116437]	tryptophan deaminase	-
[Ref.: #116437]	tween esterase	+
[Ref.: #30176]	urease	+	3.5.1.5
[Ref.: #26525]	urease	+	3.5.1.5
[Ref.: #116437]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #116437]	11384	not determinedn.d.	-	-	-	+/-	+/-	+/-	-	-	-	+/-	+/-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	+/-	-	+/-	+/-	-	-	-	-	-	-	-	-	+/-	-	-	-	+/-	-	-	-	-	-	+/-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #116437]	2916	not determinedn.d.	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	+	+	+	+	-	+	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116437]	11469	-	+	+	+	+	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5854]	Sample type/isolated from	cyanobacterial mat sample
[Ref.: #5854]	Geographic location (country and/or sea, region)	McMurdo
[Ref.: #5854]	Continent	Australia and Oceania

[Ref.: #26525]	Sample type/isolated from	cyanobacteral mat samples from lake canopus
[Ref.: #26525]	Geographic location (country and/or sea, region)	Mcmurdo Dry Valley Region
[Ref.: #26525]	Country	Antarctica
[Ref.: #26525]	Country ISO 3 Code	ATA
[Ref.: #26525]	Continent	Australia and Oceania

[Ref.: #116437]	Sample type/isolated from	Cyanobacterial material sample
[Ref.: #116437]	Country	Antarctica
[Ref.: #116437]	Country ISO 3 Code	ATA
[Ref.: #116437]	Continent	Antarctica
* marker position based on {}

Isolation sources categories

#Environmental	#Microbial community	#Microbial mat
#Host	#Microbial	#Bacteria
#Climate	#Cold	-
#Condition	#Psychrophilic (<10°C)	-
#Environmental	#Aquatic	#Lake (large)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ584833 (>99% sequence identity) for Psychrobacter from Microbeatlas

Aquatic Samples	834
Soil Samples	114
Animal Samples	378
Plant Samples	37
Total Samples	1363

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5854]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116437]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30176]	Psychrobacter aquatica partial 16S rRNA gene, isolate CMS 56	AJ584833	1481	GenBank ENA	1354303 tax ID

[Ref.: #5854]	GC-content	43 mol%
[Ref.: #26525]	GC-content	43.6 mol%

Availability in culture collections External links

[Ref.: #5854]

Culture collection no.

DSM 15339, MTCC 4386, CMS 56, CIP 108799

[Ref.: #77601]

SI-ID 138035

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft Genome Sequence of Psychrobacter aquaticus Strain CMS 56T, Isolated from a Cyanobacterial Mat Sample Collected from Water Bodies in the McMurdo Dry Valley Region of Antarctica.	Reddy GS, Ara S, Singh A, Kumar Pinnaka A, Shivaji S	Genome Announc	10.1128/genomeA.00918-13	2013	*
Phylogeny	Psychrobacter vallis sp. nov. and Psychrobacter aquaticus sp. nov., from Antarctica.	Shivaji S, Reddy GSN, Suresh K, Gupta P, Chintalapati S, Schumann P, Stackebrandt E, Matsumoto GI	Int J Syst Evol Microbiol	10.1099/ijs.0.03030-0	2005	*

References

#5854

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15339

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#26525

IJSEM 757 2005 ( DOI 10.1099/ijs.0.03030-0 , PubMed 15774658 )

#30176

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26525 (see below)

#38181 ; Curators of the CIP;

#43400

Stephan Hetzler, Daniel Bröker, Alexander Steinbüchel: Saccharification of Cellulose by Recombinant Rhodococcus opacus PD630 Strains. IJSEM 79: 5159 - 5166 2013 ( DOI 10.1128/AEM.01214-13 , PubMed 23793636 )

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#77601

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID138035.1 )

#116437 Collection of Institut Pasteur ; Curators of the CIP; CIP 108799

#26525

IJSEM 757 2005 ( DOI 10.1099/ijs.0.03030-0 , PubMed 15774658 )

* These data were automatically processed and therefore are not curated

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