Pseudarthrobacter sulfonivorans (DSM 14002, ATCC BAA-112, JCM 13520)

Name: Pseudarthrobacter sulfonivorans (DSM 14002, ATCC BAA-112, JCM 13520)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 7587

Type strain

Strain Designation ALL

Culture col. no. DSM 14002 ATCC BAA-112 JCM 13520 ALL IAM 15312

NCBI tax ID(s) 121292

Special Collections DSMZ JCM

History DSMZ <- A. P. Wood; ALL JCM <-- DSM 14002 <-- A. P. Wood strain ALL.

Links

Pseudarthrobacter sulfonivorans ALL is a bacterium that was isolated from soil from root balls of Allium aflatunense.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 87708

ATCC BAA-112,DSM 14002,JCM 13520,IAM 15312

@ref 20215

Last LPSN update 2026-05-29 08:26:41

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Micrococcaceae

Genus Pseudarthrobacter

Species Pseudarthrobacter sulfonivorans

Full scientific name Pseudarthrobacter sulfonivorans (Borodina et al. 2002) Busse 2016

Synonyms (1)

Arthrobacter sulfonivorans

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		91
125438		91.285	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
5128	METHYLOTROPHIC ARTHROBACTER AND HYPHOMICROBIUM MEDIUM (DSMZ Medium 939)		Medium recipe at MediaDive	Name: METHYLOTROPHIC ARTHROBACTER AND HYPHOMICROBIUM MEDIUM (DSMZ Medium 939) Composition: Methanol 7.92 g/l Na2HPO4 x 2 H2O 7.9 g/l KH2PO4 1.5 g/l NH4Cl 0.8 g/l EDTA 0.5 g/l MgSO4 x 7 H2O 0.1 g/l CaCl2 x 2 H2O 0.0734 g/l FeSO4 x 7 H2O 0.05 g/l MnCl2 x 4 H2O 0.025 g/l ZnSO4 x 7 H2O 0.01 g/l CoCl2 x 6 H2O 0.005 g/l (NH4)6Mo7O24 0.005 g/l CuSO4 x 5 H2O 0.002 g/l Distilled water
5128	CORYNEBACTERIUM AGAR (DSMZ Medium 53)		Medium recipe at MediaDive	Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
5128	positive	growth	28
67770	positive	growth	25

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	91.35

Observation

67770

Observationquinones: MK-9(H₂)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Host species	Geographic location	Continent
5128	soil from root balls of Allium aflatunense	Allium aflatunense	Warwickshire	Europe
67770	Soil from the root ball of Allium aflatunense	Allium aflatunense

Taxonmaps

69479

Global distribution of 16S sequence AF235091 (>99% sequence identity) for Pseudarthrobacter from Microbeatlas

Aquatic Samples	109
Soil Samples	822
Animal Samples	156
Plant Samples	439
Total Samples	1526

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5128	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1471222v1 assembly for Pseudarthrobacter sulfonivorans ALL	contig	GCA_014712225	121292.7	2995671776	121292	68.02
124043	ASM3952903v1 assembly for Pseudarthrobacter sulfonivorans JCM 13520	scaffold	GCA_039529035			121292	52.48

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5128	Arthrobacter sulfonivorans 16S ribosomal RNA gene, partial sequence	AF235091	1457		121292

GC content

@ref	GC-content (mol%)	Method
5128	61
67770	61	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudarthrobacter sulfonivorans ALL
NCBI: GCA_014712225.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.29	no
125438	anaerobic	anaerobicⓘ	no	97.91	no
125438	aerobic	aerobicⓘ	yes	91.35	no
125438	spore-forming	spore-formingⓘ	no	62.80	no
125438	thermophilic	thermophileⓘ	no	97.50	yes
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Arthrobacter ginsengisoli sp. nov., isolated from soil of a ginseng field.	Siddiqi MZ, Kim YJ, Hoang VA, Siddiqi MH, Huq MA, Yang DC	Arch Microbiol	10.1007/s00203-014-1025-8	2014

References

#5128	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14002
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudarthrobacter sulfonivorans (DSM 14002, ATCC BAA-112, JCM 13520)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014712225

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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