Bacillus mycoides 273 is an aerobe, spore-forming, mesophilic prokaryote that was isolated from soil.
spore-forming Gram-positive rod-shaped aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Bacillaceae |
| Genus Bacillus |
| Species Bacillus mycoides |
| Full scientific name Bacillus mycoides Flügge 1886 (Approved Lists 1980) |
| Synonyms (3) |
| @ref | Gram stain | Cell shape | Motility | |
|---|---|---|---|---|
| 121210 | positive | rod-shaped |
| @ref: | 689 |
| multimedia content: | DSM_2048.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_2048.jpg |
| caption: | DSM 2048 Bacillus mycoides on Columbia Blood Agar |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 689 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 121210 | CIP Medium 3 | Medium recipe at CIP | |||
| 121210 | CIP Medium 72 | Medium recipe at CIP |
Global distribution of 16S sequence AB021192 (>99% sequence identity) for Bacillus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM2263057v1 assembly for Bacillus mycoides DSM 2048 | complete | 1405 | 99.17 | ||||
| 124043 | ASM2902480v1 assembly for Bacillus mycoides DSM 2048 | complete | 1405 | 98.91 | ||||
| 66792 | ASM83260v1 assembly for Bacillus mycoides ATCC 6462 | complete | 1405 | 98.72 | ||||
| 124043 | PDT002141721.1 assembly for Bacillus mycoides CIP 103472 | contig | 1405 | 62.85 | ||||
| 66792 | ASM392v1 assembly for Bacillus mycoides DSM 2048 | chromosome | 526997 | 48.85 | ||||
| 124043 | ASM3131661v1 assembly for Bacillus mycoides ATCC 6462T | scaffold | 1405 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Bacillus mycoides gene for 16S rRNA, partial sequence | AB006931 | 277 | 1405 | ||
| 20218 | Bacillus mycoides gene for 16S ribosomal RNA | AB021192 | 1513 | 1405 | ||
| 20218 | Bacillus mycoides gene for 16S rRNA, partial sequence, strain: GTC 01994 | AB592538 | 1430 | 1405 | ||
| 20218 | Bacillus mycoides strain 6462 16S ribosomal RNA gene, partial sequence | AF155956 | 1508 | 1405 | ||
| 20218 | Bacillus mycoides strain ATCC6462 16S-23S ribosomal RNA intergenic spacer, partial sequence | AF267906 | 144 | 1405 | ||
| 20218 | Bacillus mycoides partial 16S rRNA gene and ITS1, strain DSM 2048 | AJ841874 | 543 | 1405 | ||
| 20218 | Bacillus mycoides strain ATCC 6462 16S ribosomal RNA gene, partial sequence | EF210295 | 1461 | 1405 | ||
| 20218 | Bacillus mycoides 16S-23S rRNA intergenic spacer, DNA sequence | L37577 | 144 | 1405 | ||
| 20218 | B.mycoides 16S ribosomal RNA | X55061 | 1450 | 1405 | ||
| 20218 | Bacillus mycoides 16S rRNA gene, strain DSM 2048T | Z84592 | 832 | 1396 | ||
| 124043 | Bacillus mycoides partial 16S rRNA gene and ITS1, strain CIP 103472 | AM747229 | 1663 | 1405 | ||
| 124043 | Bacillus mycoides DSM 2048 partial 16S rRNA gene, strain JC1004 | LS998020 | 892 | 526997 | ||
| 124043 | Bacillus mycoides strain DSM 2048 16S ribosomal RNA gene, partial sequence. | ON872258 | 555 | 1405 | ||
| 124043 | Bacillus mycoides strain DSM 2048 16S ribosomal RNA gene, partial sequence. | OR841474 | 1417 | 1405 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 95.10 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 89.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 69.70 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 96.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 77.37 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 93.86 | no |
| 125438 | aerobic | aerobicⓘ | yes | 63.07 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 90.34 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.85 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 84.43 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
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| Activity-Based Screening of Soil Samples from Nyingchi, Tibet, for Amylase-Producing Bacteria and Other Multifunctional Enzyme Capacities. | Liu JH, Guo JN, Lu H, Lin J. | Int J Microbiol | 10.1155/2022/2401766 | 2022 | ||
| Retrospective Screening of Anthrax-like Disease Induced by Bacillus tropicus str. JMT from Chinese Soft-Shell Turtles in Taiwan. | Tsai JM, Kuo HW, Cheng W. | Pathogens | 10.3390/pathogens12050693 | 2023 | ||
| Genetics | Do Organic Amendments Foster Only Beneficial Bacteria in Agroecosystems?: The Case of Bacillus paranthracis TSO55. | Campos-Avelar I, Montoya-Martinez AC, Escalante-Beltran A, Parra-Cota FI, de Los Santos Villalobos S. | Plants (Basel) | 10.3390/plants14071019 | 2025 | |
| Enzymology | Assessment and molecular characterization of Bacillus cereus isolated from edible fungi in China. | Liu C, Yu P, Yu S, Wang J, Guo H, Zhang Y, Zhang J, Liao X, Li C, Wu S, Gu Q, Zeng H, Zhang Y, Wei X, Zhang J, Wu Q, Ding Y. | BMC Microbiol | 10.1186/s12866-020-01996-0 | 2020 | |
| Prevalence, Virulence Feature, Antibiotic Resistance and MLST Typing of Bacillus cereus Isolated From Retail Aquatic Products in China. | Zhang Y, Chen M, Yu P, Yu S, Wang J, Guo H, Zhang J, Zhou H, Chen M, Zeng H, Wu S, Pang R, Ye Q, Xue L, Zhang S, Li Y, Zhang J, Wu Q, Ding Y. | Front Microbiol | 10.3389/fmicb.2020.01513 | 2020 | ||
| Variation in the morphology of Bacillus mycoides due to applied force and substrate structure. | Stratford JP, Woodley MA, Park S. | PLoS One | 10.1371/journal.pone.0081549 | 2013 | ||
| The small acid soluble proteins (SASP alpha and SASP beta) of Bacillus weihenstephanensis and Bacillus mycoides group 2 are the most distinct among the Bacillus cereus group. | Callahan C, Fox K, Fox A. | Mol Cell Probes | 10.1016/j.mcp.2009.07.003 | 2009 | ||
| Pathogenicity and Genomic Characterization of a Novel Genospecies, Bacillus shihchuchen, of the Bacillus cereus Group Isolated from Chinese Softshell Turtle (Pelodiscus sinensis). | Cheng LW, Byadgi OV, Tsai CE, Wang PC, Chen SC. | Int J Mol Sci | 10.3390/ijms24119636 | 2023 | ||
| Phylogeny | Novel Effective Bacillus cereus Group Species "Bacillus clarus" Is Represented by Antibiotic-Producing Strain ATCC 21929 Isolated from Soil. | Mendez Acevedo M, Carroll LM, Mukherjee M, Mills E, Xiaoli L, Dudley EG, Kovac J. | mSphere | 10.1128/msphere.00882-20 | 2020 | |
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| Metabolism | Characterization of Three Different Unusual S-Layer Proteins from Viridibacillus arvi JG-B58 That Exhibits Two Super-Imposed S-Layer Proteins. | Suhr M, Lederer FL, Gunther TJ, Raff J, Pollmann K. | PLoS One | 10.1371/journal.pone.0156785 | 2016 | |
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| Phylogeny | Cloning and nucleotide sequence analysis of gyrB of Bacillus cereus, B. thuringiensis, B. mycoides, and B. anthracis and their application to the detection of B. cereus in rice. | Yamada S, Ohashi E, Agata N, Venkateswaran K | Appl Environ Microbiol | 10.1128/AEM.65.4.1483-1490.1999 | 1999 | |
| Genetics | Proposal of Bacillus altaicus sp. nov. Isolated from Soil in the Altai Region, Russia. | Shikov AE, Romanenko MN, Shmatov FM, Belousov MV, Solovchenko A, Chivkunova O, Savelev GK, Kuznetsova IG, Karlov DS, Nizhnikov AA, Antonets KS. | Int J Mol Sci | 10.3390/ijms26199517 | 2025 | |
| Bacillus arachidis sp. nov., Isolated from Peanut Rhizosphere Soil. | Chen Y, Li Y, Shen J, Liu Q, Liu Y, Chu Y, Xiao Z. | Curr Microbiol | 10.1007/s00284-022-02925-2 | 2022 | ||
| Plant growth promotion of the forage plant Lupinus albus Var. Orden Dorado using Pseudomonas agronomica sp. nov. and Bacillus pretiosus sp. nov. added over a valorized agricultural biowaste. | Robas Mora M, Fernandez Pastrana VM, Oliva LLG, Lobo AP, Jimenez Gomez PA. | Front Microbiol | 10.3389/fmicb.2022.1046201 | 2022 | ||
| Phylogeny | Bacillus locisalis sp. nov., a new haloalkaliphilic species from hypersaline and alkaline lakes of China, Kenya and Tanzania. | Marquez MC, Carrasco IJ, de la Haba RR, Jones BE, Grant WD, Ventosa A. | Syst Appl Microbiol | 10.1016/j.syapm.2011.04.003 | 2011 | |
| Phylogeny | Salisediminibacterium halotolerans gen. nov., sp. nov., a halophilic bacterium from soda lake sediment. | Jiang F, Cao SJ, Li ZH, Fan H, Li HF, Liu WJ, Yuan HL. | Int J Syst Evol Microbiol | 10.1099/ijs.0.034488-0 | 2012 | |
| Phylogeny | Bacillus alkalitelluris sp. nov., an alkaliphilic bacterium isolated from sandy soil. | Lee JC, Lee GS, Park DJ, Kim CJ. | Int J Syst Evol Microbiol | 10.1099/ijs.0.65733-0 | 2008 | |
| Phylogeny | Bacillus taeanensis sp. nov., a halophilic Gram-positive bacterium from a solar saltern in Korea. | Lim JM, Jeon CO, Kim CJ. | Int J Syst Evol Microbiol | 10.1099/ijs.0.64036-0 | 2006 |
| #689 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2048 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #48546 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 26678 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121210 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103472 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data