Name: Microbacterium aurantiacum DSM 12506
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7404

Type strain:

Species: Microbacterium aurantiacum

Culture col. no.: DSM 12506, ATCC 49090, IFO 15234, NBRC 15234, NCFB 2288, NRRL B-24217, JCM 9177, CIP 105730, IAM 15208, NCIMB 702288, VKM Ac-2075

Strain history: IFO 15234 <-- NCFB 2288 (Microbacterium laevaniformans) <-- M. D. Collins C820 <-- F. F. Dias and J. V. Bhat.

NCBI tax ID(s): 162393 (species)

Other strains from Microbacterium aurantiacum

M. aurantiacum ST033359(HKI),
M. aurantiacum JCM 9178, ATCC 49091, IFO 15235, ...

Section

Microbacterium aurantiacum DSM 12506 is a mesophilic bacterium that was isolated from sewage.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Microbacterium*
	Species	**Microbacterium aurantiacum**
	Full Scientific Name (PNU)	Microbacterium aurantiacum Takeuchi and Hatano 1998

Information on morphological and physiological properties Morphology

[Ref.: #18364]	Colony color	Melon yellow (1028)
[Ref.: #18364]	Incubation period	10-14 days
[Ref.: #18364]	Cultivation medium used	ISP 2

[Ref.: #18364]	Colony color	Melon yellow (1028)
[Ref.: #18364]	Incubation period	10-14 days
[Ref.: #18364]	Cultivation medium used	ISP 3

[Ref.: #18364]	Colony color	Melon yellow (1028)
[Ref.: #18364]	Incubation period	10-14 days
[Ref.: #18364]	Cultivation medium used	ISP 4

[Ref.: #18364]	Colony color	Melon yellow (1028)
[Ref.: #18364]	Incubation period	10-14 days
[Ref.: #18364]	Cultivation medium used	ISP 5

[Ref.: #18364]	Colony color	Melon yellow (1028)
[Ref.: #18364]	Incubation period	10-14 days
[Ref.: #18364]	Cultivation medium used	ISP 6

[Ref.: #18364]	Colony color	Melon yellow (1028)
[Ref.: #18364]	Incubation period	10-14 days
[Ref.: #18364]	Cultivation medium used	ISP 7

[Ref.: #18364]	Multicellular complex forming ability	no
[Ref.: #18364]	Medium Name (multicellularity)	ISP 2

[Ref.: #18364]	Multicellular complex forming ability	no
[Ref.: #18364]	Medium Name (multicellularity)	ISP 3

[Ref.: #18364]	Multicellular complex forming ability	no
[Ref.: #18364]	Medium Name (multicellularity)	ISP 4

[Ref.: #18364]	Multicellular complex forming ability	no
[Ref.: #18364]	Medium Name (multicellularity)	ISP 5

[Ref.: #18364]	Multicellular complex forming ability	no
[Ref.: #18364]	Medium Name (multicellularity)	ISP 6

[Ref.: #18364]	Multicellular complex forming ability	no
[Ref.: #18364]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4752]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #4752]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #4752]

Culture medium composition

expand / minimize

[Ref.: #18364]

Culture medium

ISP 2

[Ref.: #18364]

Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

ISP 3

[Ref.: #18364]

Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #18364]

Culture medium

ISP 4

[Ref.: #18364]

Culture medium growth

[Ref.: #18364]

Culture medium composition

expand / minimize

[Ref.: #18364]

Culture medium

ISP 5

[Ref.: #18364]

Culture medium growth

[Ref.: #18364]

Culture medium composition

expand / minimize

[Ref.: #18364]

Culture medium

ISP 6

[Ref.: #18364]

Culture medium growth

[Ref.: #18364]

Culture medium composition

expand / minimize

[Ref.: #18364]

Culture medium

ISP 7

[Ref.: #18364]

Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #39348]

Culture medium

MEDIUM 119 - for Azotobacter vinelandii

[Ref.: #39348]

Culture medium growth

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #4752]	growth	30 °C
[Ref.: #18364]	optimum	28 °C
[Ref.: #39348]	growth	30 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #4752]	Temperature range	mesophilic
[Ref.: #18364]	Temperature range	mesophilic
[Ref.: #39348]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #4752]	Murein short key	B06
[Ref.: #4752]	Murein types	B2ß {Gly} [L-Hsr] D-Glu(Hyg)-Gly-D-Orn

[Ref.: #67770]

Observation

quinones: MK-12

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18364]	74	not determinedn.d.	+	-	+	-	+	+	+	+	+	+	+	+	+	+	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4752]	Sample type/isolated from	sewage

[Ref.: #67770]	Sample type/isolated from	Sewage
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Wastewater

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4752]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4752]	Microbacterium aurantiacum gene for 16S rRNA, partial sequence	AB004726	1482	ENA	162393 tax ID
[Ref.: #20218]	Microbacterium aurantiacum partial 16S rRNA gene, type strain DSM 12506	AM182159	1356	ENA	162393 tax ID	*

[Ref.: #4752]	GC-content	70.3 mol%
[Ref.: #67770]	GC-content	70.3 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #4752]

Culture collection no.

DSM 12506, ATCC 49090, IFO 15234, NBRC 15234, NCFB 2288, NRRL B-24217, JCM 9177, CIP 105730, IAM 15208, NCIMB 702288, VKM Ac-2075

[Ref.: #20218]

Associated Passport(s) in StrainInfo

163230, 113742, 152673, 335720, 113743, 684854

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Microbacterium telephonicum sp. nov., isolated from the screen of a cellular phone.	Rahi P, Kurli R, Pansare AN, Khairnar M, Jagtap S, Patel NB, Dastager SG, Lawson PA, Shouche YS	Int J Syst Evol Microbiol	10.1099/ijsem.0.002622	2018	*
Phylogeny	Proposal of six new species in the genus Microbacterium and transfer of Flavobacterium marinotypicum ZoBell and Upham to the genus Microbacterium as Microbacterium maritypicum comb. nov.	Takeuchi M, Hatano K	Int J Syst Bacteriol	10.1099/00207713-48-3-973	1998	*

References

#4752

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12506

#18364

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39348 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

* These data were automatically processed and therefore are not curated

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