Name: Microbacterium liquefaciens Mbm 15
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 7380

Type strain:

Species: Microbacterium liquefaciens

Strain Designation: Mbm 15

Culture col. no.: DSM 20638, ATCC 43647, NCIB 11509, NRRL B-24237, CCUG 33091, JCM 3879, BCRC 14859, CGMCC 1.1934, CIP 102402, HAMBI 1895, IAM 15185, IFO 15037, IMSNU 21275, KCTC 9227, LMG 16342, NBRC 15037, NCIMB 11509, VKM Ac-1018

Strain history: CIP <- 1986, DSM <- NCIB <- K. Robinson: strain Mbm15, Microbacterium liquefaciens

NCBI tax ID(s): 33918 (species)

SI-ID 45479

LMG 16342, ATCC 43647, CCRC 14859, CCUG 33091, CIP 102402, DSM 20638, IFO 15037, JCM 3879, NCIMB 11509, VKM Ac-1018, NCIB 11509, KCTC 9227, NBRC 15037, BCRC 14859, HAMBI 1895, NRRL B-24237, IAM 15185, CGMCC 1.1934

Special Collections

Other strains from Microbacterium liquefaciens

Section

When using BacDive for research please cite our paper

Microbacterium liquefaciens Mbm 15 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from milk.

Gram-positive
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Microbacterium*
	Species	**Microbacterium liquefaciens**
	Full Scientific Name (LPSN)	Microbacterium liquefaciens (Collins et al. 1983 ex Orla-Jensen 1919) Takeuchi and Hatano 1998

Synonym

Aureobacterium liquefaciens

Information on morphological and physiological properties Morphology

[Ref.: #120624]	Gram stain	positive
[Ref.: #125439]	Gram stain	positive Confidence in %92.5
[Ref.: #125438]	Gram stain	positive Confidence in %91.428

[Ref.: #120624]	Cell shape	rod-shaped

[Ref.: #120624]	Motility	no

[Ref.: #18766]	Colony color	Golden yellow
[Ref.: #18766]	Incubation period	10-14 days
[Ref.: #18766]	Cultivation medium used	ISP 2

[Ref.: #18766]	Colony color	Sulfur white
[Ref.: #18766]	Incubation period	10-14 days
[Ref.: #18766]	Cultivation medium used	ISP 3

[Ref.: #18766]	Colony color	Light ivory
[Ref.: #18766]	Incubation period	10-14 days
[Ref.: #18766]	Cultivation medium used	ISP 4

[Ref.: #18766]	Colony color	Zinc yellow
[Ref.: #18766]	Incubation period	10-14 days
[Ref.: #18766]	Cultivation medium used	ISP 6

[Ref.: #18766]	Incubation period	10-14 days
[Ref.: #18766]	Cultivation medium used	ISP 5

[Ref.: #18766]	Incubation period	10-14 days
[Ref.: #18766]	Cultivation medium used	ISP 7

[Ref.: #18766]	Multicellular complex forming ability	no
[Ref.: #18766]	Medium Name (multicellularity)	ISP 2

[Ref.: #18766]	Multicellular complex forming ability	no
[Ref.: #18766]	Medium Name (multicellularity)	ISP 3

[Ref.: #18766]	Multicellular complex forming ability	no
[Ref.: #18766]	Medium Name (multicellularity)	ISP 4

[Ref.: #18766]	Multicellular complex forming ability	no
[Ref.: #18766]	Medium Name (multicellularity)	ISP 5

[Ref.: #18766]	Multicellular complex forming ability	no
[Ref.: #18766]	Medium Name (multicellularity)	ISP 6

[Ref.: #18766]	Multicellular complex forming ability	no
[Ref.: #18766]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8984]

Culture medium

CORYNEBACTERIUM AGAR (DSMZ Medium 53)

[Ref.: #8984]

Culture medium growth

[Ref.: #8984]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8984]

Culture medium composition

expand / minimize

[Ref.: #18766]

Culture medium

ISP 2

[Ref.: #18766]

Culture medium growth

[Ref.: #18766]

Culture medium composition

expand / minimize

[Ref.: #18766]

Culture medium

ISP 3

[Ref.: #18766]

Culture medium growth

[Ref.: #18766]

Culture medium composition

expand / minimize

[Ref.: #18766]

Culture medium

ISP 4

[Ref.: #18766]

Culture medium growth

[Ref.: #18766]

Culture medium composition

expand / minimize

[Ref.: #18766]

Culture medium

ISP 5

[Ref.: #18766]

Culture medium growth

[Ref.: #18766]

Culture medium composition

expand / minimize

[Ref.: #18766]

Culture medium

ISP 6

[Ref.: #18766]

Culture medium growth

[Ref.: #18766]

Culture medium composition

expand / minimize

[Ref.: #18766]

Culture medium

ISP 7

[Ref.: #18766]

Culture medium growth

[Ref.: #18766]

Culture medium composition

expand / minimize

[Ref.: #40416]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #40416]

Culture medium growth

[Ref.: #40416]

Culture medium composition

expand / minimize

[Ref.: #120624]

Culture medium

CIP Medium 3

[Ref.: #120624]

Culture medium growth

[Ref.: #120624]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #120624]

Culture medium

CIP Medium 72

[Ref.: #120624]

Culture medium growth

[Ref.: #120624]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #8984]		growth	30 °C
[Ref.: #18766]		optimum	28 °C
[Ref.: #40416]		growth	30 °C
[Ref.: #51372]		growth	37 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #120624]		growth	10-37 °C
[Ref.: #120624]	negative	growth	41 °C
[Ref.: #120624]	negative	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #51372]	Oxygen tolerance	aerobe
[Ref.: #120624]	Oxygen tolerance	obligate aerobe
[Ref.: #125439]	Oxygen tolerance	obligate aerobe Confidence in %97.7

	Salt	Tested relation		Salt conc.
[Ref.: #18766]	NaCl		maximum	5	%
[Ref.: #120624]	NaCl		growth	0-4	%
[Ref.: #120624]	NaCl	no	growth	6	%
[Ref.: #120624]	NaCl	no	growth	8	%
[Ref.: #120624]	NaCl	no	growth	10	%

[Ref.: #8984]	Murein short key	B06
[Ref.: #8984]	Murein types	B2ß {Gly} [L-Hsr] D-Glu(Hyg)-Gly-D-Orn

[Ref.: #67770]

Observation

quinones: MK-11, MK-12

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18766]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18766]	cellulose ChEBI	-
[Ref.: #120624]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68379]	D-glucose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	+	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #120624]	esculin ChEBI	+	hydrolysis
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #18766]	fructose ChEBI	+
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne, API 20E
[Ref.: #18766]	glucose ChEBI	-
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #120624]	hippurate ChEBI	+	hydrolysis
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68379]	maltose ChEBI	+	fermentation	* from API Coryne
[Ref.: #18766]	mannitol ChEBI	-
[Ref.: #18766]	myo-inositol ChEBI	-
[Ref.: #120624]	nitrate ChEBI	-	reduction
[Ref.: #120624]	nitrate ChEBI	-	respiration
[Ref.: #68379]	nitrate ChEBI	+	reduction	* from API Coryne
[Ref.: #120624]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #18766]	raffinose ChEBI	-
[Ref.: #18766]	rhamnose ChEBI	-
[Ref.: #18766]	sucrose ChEBI	-
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18766]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #120624]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite	Production
[Ref.: #120624]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #120624]	acetoin ChEBI	-
[Ref.: #120624]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	-			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #120624]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68379]	alkaline phosphatase	-	3.1.3.1	* from API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #120624]	amylase	-
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #120624]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API Coryne, API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68379]	beta-glucosidase	-	3.2.1.21	* from API Coryne
[Ref.: #68379]	beta-glucuronidase	+	3.2.1.31	* from API Coryne
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120624]	caseinase	+	3.4.21.50
[Ref.: #120624]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #120624]	DNase	+
[Ref.: #120624]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #120624]	gelatinase	+
[Ref.: #68379]	gelatinase	-		* from API Coryne, API 20E
[Ref.: #120624]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120624]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120624]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #120624]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #120624]	oxidase	-
[Ref.: #120624]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #120624]	protease	+
[Ref.: #68379]	pyrazinamidase	+	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120624]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #120624]	tween esterase	-
[Ref.: #120624]	urease	-	3.5.1.5
[Ref.: #68379]	urease	+	3.5.1.5	* from API Coryne
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18766]	242	+	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120624]	222	not determinedn.d.	+	+	+	-	+	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18766]	239	+	+	+	-	+	+	+	-	-	+	-	not determinedn.d.	+	+	-	+	+	-	+	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18766]	331	not determinedn.d.	+	+	+	-	+	+	+	-	-	-	-	+	+	-	+	+	-	+	-
[Ref.: #120624]	7059	-	+	-	-	-	+	+	+	-	-	+	+	+	+	-	+	+	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8984]	Sample type/isolated from	milk

[Ref.: #51372]	Sample type/isolated from	Milk

[Ref.: #67770]	Sample type/isolated from	Milk

[Ref.: #120624]	Sample type/isolated from	Food, Milk
* marker position based on {}

Isolation sources categories

#Host Body Product	#Fluids	#Milk
#Engineered	#Food production	#Dairy product

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X77444 (>99% sequence identity) for Microbacterium from Microbeatlas

Aquatic Samples	9581
Soil Samples	10113
Animal Samples	16954
Plant Samples	5605
Total Samples	42253

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18766]	Biosafety level	1	Risk group (German classification)
[Ref.: #8984]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120624]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8984]	A.liquefaciens (DSM 20638) 16S rRNA gene	X77444	1474	GenBank ENA	33918 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Microbacterium liquefaciens NBRC 15037	GCA_006539765	contig	GenBank ENA	33918 tax ID
[Ref.: #66792]	Microbacterium liquefaciens JCM 3879	GCA_014648755	scaffold	GenBank ENA	33918 tax ID	*
[Ref.: #66792]	Microbacterium liquefaciens strain JCM 3879	33918.5	wgs	PATRIC	33918 tax ID	*
[Ref.: #66792]	Microbacterium liquefaciens strain NBRC 15037	33918.3	wgs	PATRIC	33918 tax ID	*

[Ref.: #8984]	GC-content	68.6 mol%
[Ref.: #67770]	GC-content	72.5 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	68.6 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Microbacterium liquefaciens JCM 3879 NCBI: GCA_014648755.1
[Ref.: #125438]	gram-positive	gram-positiveⓘ	yes	91.428	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	98.603	no
[Ref.: #125438]	aerobic	aerobicⓘ	yes	85.109	yes
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	79.119	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	96.467	yes
[Ref.: #125438]	motile2+	flagellatedⓘ	no	85.5	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Microbacterium liquefaciens JCM 3879 NCBI: GCA_014648755
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	89.6
[Ref.: #125439]	BacteriaNet	motilityⓘ	no	58.6
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	positive	92.5
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	97.7

Availability in culture collections External links

[Ref.: #8984]

Culture collection no.

DSM 20638, ATCC 43647, NCIB 11509, NRRL B-24237, CCUG 33091, JCM 3879, BCRC 14859, CGMCC 1.1934, CIP 102402, HAMBI 1895, IAM 15185, IFO 15037, IMSNU 21275, KCTC 9227, LMG 16342, NBRC 15037, NCIMB 11509, VKM Ac-1018

[Ref.: #76829]

SI-ID 45479

References

#8984

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20638

#18766

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#40416 ; Curators of the CIP;
#51372 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33091

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#76829

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45479.1 )

#120624 Collection of Institut Pasteur ; Curators of the CIP; CIP 102402

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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Search for species Microbacterium liquefaciens in external resources:
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Microbacterium liquefaciens JCM 3879

Microbacterium liquefaciens JCM 3879

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