Name: Methanosarcina barkeri DSM 1311
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7090

Type strain:

Species: Methanosarcina barkeri

Culture col. no.: DSM 1311, OCM 27

Strain history: <- J.G. Zeikus, UBS

NCBI tax ID(s): 2208 (species)

SI-ID 47358

DSM 1311

Other strains from Methanosarcina barkeri

M. barkeri MS, DSM 800, ATCC 43569, JCM 10043, ... (type strain)
M. barkeri 227, DSM 1538, ATCC 43241, OCM ...
M. barkeri DSM 2948, OCM 86
M. barkeri Wiesmoor, DSM 8687, OCM 89

Section

Methanosarcina barkeri DSM 1311 is an anaerobe, mesophilic archaeon that was isolated from anaerobic sediment.

anaerobe
mesophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	"Methanomicrobia"
	Order	*Methanosarcinales*
	Family	*Methanosarcinaceae*
	Genus	*Methanosarcina*
	Species	**Methanosarcina barkeri**
	Full Scientific Name (LPSN)	Methanosarcina barkeri Schnellen 1947 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #509]

Culture medium

METHANOSARCINA MEDIUM (DSMZ Medium 120)

[Ref.: #509]

Culture medium growth

[Ref.: #509]

Culture medium link

Medium recipe at MediaDive

[Ref.: #509]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #509]			growth	35 °C

[Ref.: #509]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #509]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #509]	Sample type/isolated from	anaerobic sediment
[Ref.: #509]	Geographic location (country and/or sea, region)	Wisconsin, Lake Mendota
[Ref.: #509]	Country	USA
[Ref.: #509]	Country ISO 3 Code	USA
[Ref.: #509]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Sediment
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #509]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Enterococcus faecalis clone OCM027 16S ribosomal RNA gene, partial sequence	GU417219	459	ENA	1351 tax ID	*

[Ref.: #509]

GC-content

43.5 mol%

Availability in culture collections External links

[Ref.: #509]

Culture collection no.

DSM 1311, OCM 27

[Ref.: #76545]

SI-ID 47358

References

#509	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1311

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#76545

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47358.1 )

* These data were automatically processed and therefore are not curated

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