Name: Methanosaeta pelagica 03d30q
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 7052

Type strain:

Species: Methanosaeta pelagica

Strain Designation: 03d30q

Culture col. no.: DSM 24271, NBRC 105920

Strain history: <- K. Mori, NBRC; 03d30q <- K. Mori {2008}

NCBI tax ID(s): 1110545 (species)

Special Collections

DSMZ

Section

Methanosaeta pelagica 03d30q is an anaerobe archaeon that was isolated from tidal flat sediment.

anaerobe
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	"Methanomicrobia"
	Order	*Methanosarcinales*
	Family	*Methanotrichaceae*
	Genus	Methanosaeta
	Species	"Methanosaeta pelagica"
	Full Scientific Name (LPSN)	Methanosaeta pelagica Mori et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #17601]

Incubation period

>14 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17601]

Culture medium

METHANOSAETA PELAGICA MEDIUM (DSMZ Medium 1329)

[Ref.: #17601]

Culture medium growth

[Ref.: #17601]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17601]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17601]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #17601]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17601]	Sample type/isolated from	tidal flat sediment
[Ref.: #17601]	Geographic location (country and/or sea, region)	Chiba Prefecture, Tokyo Bay
[Ref.: #17601]	Country	Japan
[Ref.: #17601]	Country ISO 3 Code	JPN
[Ref.: #17601]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Tidal flat
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB679167 (>99% sequence identity) for Methanosaeta pelagica subclade from Microbeatlas

Aquatic Samples	37
Soil Samples	1
Animal Samples
Plant Samples
Total Samples	38

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17601]	Methanosaeta pelagica gene for 16S rRNA, partial sequence	AB679167	1383	GenBank ENA	1110545 tax ID

[Ref.: #17601]

GC-content

45.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #17601]

Culture collection no.

DSM 24271, NBRC 105920

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aceticlastic and NaCl-requiring methanogen "Methanosaeta pelagica" sp. nov., isolated from marine tidal flat sediment.	Mori K, Iino T, Suzuki K, Yamaguchi K, Kamagata Y	Appl Environ Microbiol	10.1128/AEM.07484-11	2012	*

References

#17601

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24271

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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