Name: Methanothrix thermoacetophila Z-517
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7049

Type strain:

Species: Methanothrix thermoacetophila

Strain Designation: Z-517

Culture col. no.: DSM 4774, VKM B-1831

Strain history: <- A. N. Nozhevnikova, Institute of Microbiology, Russ. Academy of Sciences, Moscow, Russia; Z-517 <- A. N. Nozhevnikova and T. G. Yagodina

NCBI tax ID(s): 2224 (species)

SI-ID 47867

DSM 4774, VKM B-1831

Other strains from Methanothrix thermoacetophila

M. thermoacetophila CALS-1, DSM 3870
M. thermoacetophila PT, DSM 6194, JCM 14653, NBRC 101360

Section

Methanothrix thermoacetophila Z-517 is an anaerobe, thermophilic archaeon that was isolated from mud, thermal Khlorid Lake.

anaerobe
thermophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	"Methanomicrobia"
	Order	*Methanosarcinales*
	Family	*Methanotrichaceae*
	Genus	*Methanothrix*
	Species	**Methanothrix thermoacetophila**
	Full Scientific Name (LPSN)	Methanothrix thermoacetophila corrig. Nozhevnikova and Chudina 1988

	Synonym	Methanothrix thermophila
	Synonym	Methanosaeta thermophila
	Synonym	Methanothrix thermoacetophilia
	Synonym	Methanosaeta thermoacetophila

Information on morphological and physiological properties Morphology

[Ref.: #1818]

Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1818]

Culture medium

METHANOTHRIX SOEHNGENII MEDIUM (DSMZ Medium 334a)

[Ref.: #1818]

Culture medium growth

[Ref.: #1818]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1818]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1818]			growth	55 °C

[Ref.: #1818]

Temperature range

thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1818]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1818]	Sample type/isolated from	mud, thermal Khlorid Lake
[Ref.: #1818]	Geographic location (country and/or sea, region)	Kamchatka
[Ref.: #1818]	Country	USSR
[Ref.: #1818]	Country ISO 3 Code	RUS
[Ref.: #1818]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Terrestrial	#Mud (Sludge)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LN868388 (>99% sequence identity) for Methanothrix thermoacetophila subclade from Microbeatlas

Aquatic Samples	54
Soil Samples	1
Animal Samples	3
Plant Samples
Total Samples	58

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1818]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1818]	Methanosaeta thermophila partial 16S rRNA gene, type strain DSM 4774T, isolate Z-517	LN868388	1475	ENA	2224 tax ID
[Ref.: #20218]	16S rRNA [Methanothrix thermoacetophila, Z-517, DSM 4774, rRNA Partial, 159 nt, segment 1 of 3]	S42717	159	ENA	2224 tax ID	*
[Ref.: #20218]	16S rRNA [Methanothrix thermoacetophila, Z-517, DSM 4774, rRNA Partial, 194 nt, segment 2 of 3]	S42720	194	ENA	2224 tax ID	*
[Ref.: #20218]	16S rRNA [Methanothrix thermoacetophila, Z-517, DSM 4774, rRNA Partial, 186 nt, segment 3 of 3]	S42725	186	ENA	2224 tax ID	*

Availability in culture collections External links

[Ref.: #1818]

Culture collection no.

DSM 4774, VKM B-1831

[Ref.: #76508]

SI-ID 47867

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Characterization of three thermophilic strains of Methanothrix ("Methanosaeta") thermophila sp. nov. and rejection of Methanothrix ("Methanosaeta") thermoacetophila.	Kamagata Y, Kawasaki H, Oyaizu H, Nakamura K, Mikami E, Endo G, Koga Y, Yamasato K	Int J Syst Bacteriol	10.1099/00207713-42-3-463	1992	*

References

#1818

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4774

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#76508

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47867.1 )

* These data were automatically processed and therefore are not curated

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