Name: Leptospira terpstrae Hualin
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6807

Type strain:

Species: Leptospira terpstrae

Strain Designation: Hualin, LT 11-33

Culture col. no.: DSM 21521, ATCC 700639

Strain history: <- R. Galloway, CDC; LT 11-33 {2008} <- ...

NCBI tax ID(s): 293075 (species)

Section

Leptospira terpstrae Hualin is an aerobe, mesophilic, Gram-negative bacterium of the family Leptospiraceae.

Gram-negative
motile
spiral-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Spirochaetota*
	Class	*Spirochaetia*
	Order	*Leptospirales*
	Family	*Leptospiraceae*
	Genus	*Leptospira*
	Species	**Leptospira terpstrae**
	Full Scientific Name (LPSN)	Leptospira terpstrae Smythe et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30912]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.989

[Ref.: #30912]	Cell shape	spiral-shaped

[Ref.: #30912]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15758]

Culture medium

LEPTOSPIRA-MEDIUM (DSMZ Medium 1113)

[Ref.: #15758]

Culture medium growth

[Ref.: #15758]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15758]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #15758]			growth	30 °C
[Ref.: #30912]			growth	12-36 °C

[Ref.: #15758]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30912]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.998

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15758]	Country	China
[Ref.: #15758]	Country ISO 3 Code	CHN
[Ref.: #15758]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AY631888 (>99% sequence identity) for Leptospira from Microbeatlas

Aquatic Samples	3560
Soil Samples	824
Animal Samples	382
Plant Samples	195
Total Samples	4961

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15758]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15758]	Leptospira genomosp. 4 serovar Hualin strain LT 11-33 16S ribosomal RNA gene, partial sequence	AY631888	1422	ENA	293076 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639	GCA_000332495	contig	GenBank	1257025 tax ID	*
[Ref.: #66792]	Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639	1257025.3	wgs	PATRIC	1257025 tax ID	*

[Ref.: #15758]	GC-content	38.9 mol%
[Ref.: #30912]	GC-content	38 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 PATRIC: 1257025.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 PATRIC: 1257025.3
[Ref.: #69480]	motile	yes	91.681	yes
[Ref.: #69480]	gram-positive	no	98.659	yes
[Ref.: #69480]	anaerobic	no	97.145	yes
[Ref.: #69480]	aerobic	yes	78.248	yes
[Ref.: #69480]	halophile	no	94.193	no
[Ref.: #69480]	spore-forming	no	93.976	no
[Ref.: #69480]	thermophile	no	97.108	yes
[Ref.: #69480]	glucose-util	yes	54.092	no
[Ref.: #69480]	flagellated	no	70.68	no
[Ref.: #69480]	glucose-ferment	no	90.642	no

Availability in culture collections External links

[Ref.: #15758]

Culture collection no.

DSM 21521, ATCC 700639

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Classification of Leptospira genomospecies 1, 3, 4 and 5 as Leptospira alstonii sp. nov., Leptospira vanthielii sp. nov., Leptospira terpstrae sp. nov. and Leptospira yanagawae sp. nov., respectively.	Smythe L, Adler B, Hartskeerl RA, Galloway RL, Turenne CY, Levett PN, The International Committee On Systematics Of Prokaryotes Subcommittee On The Taxonomy Of	Int J Syst Evol Microbiol	10.1099/ijs.0.047324-0	2012	*

References

#15758

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21521

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30912

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27242 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#27242

IJSEM 1859 2013 ( DOI 10.1099/ijs.0.047324-0 , PubMed 22984140 )

* These data were automatically processed and therefore are not curated

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Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639

Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639

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